RNA–Protein interactions for RNA: ENST00000527836.5

SCN3B-204, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-204ENST00000527836 DHX57Q6P158 1386 aaKnown RBP18.17■□□□□ 0.5
SCN3B-204ENST00000527836 ABCC11Q96J66 1382 aa18.17■□□□□ 0.5
SCN3B-204ENST00000527836 YTHDC2Q9H6S0 1430 aaKnown RBP18.16■□□□□ 0.5
SCN3B-204ENST00000527836 KNDC1Q76NI1 1749 aa18.16■□□□□ 0.5
SCN3B-204ENST00000527836 NUTM2FA1L443 756 aa18.16■□□□□ 0.5
SCN3B-204ENST00000527836 C14orf93Q9H972 538 aaKnown RBP18.16■□□□□ 0.5
SCN3B-204ENST00000527836 CDC42BPGQ6DT37 1551 aa18.16■□□□□ 0.5
SCN3B-204ENST00000527836 LAMC1P11047 1609 aa18.16■□□□□ 0.5
SCN3B-204ENST00000527836 CFAP70Q5T0N1 1121 aa18.15■□□□□ 0.5
SCN3B-204ENST00000527836 TECPR2O15040 1411 aa18.15■□□□□ 0.5
SCN3B-204ENST00000527836 MYOM2P54296 1465 aa18.14■□□□□ 0.5
SCN3B-204ENST00000527836 PNPLA6Q8IY17 1366 aa18.14■□□□□ 0.49
SCN3B-204ENST00000527836 HRCP23327 699 aa18.13■□□□□ 0.49
SCN3B-204ENST00000527836 C8orf37Q96NL8 207 aa18.13■□□□□ 0.49
SCN3B-204ENST00000527836 KDM2AQ9Y2K7 1162 aa18.13■□□□□ 0.49
SCN3B-204ENST00000527836 NPHP3Q7Z494 1330 aa18.13■□□□□ 0.49
SCN3B-204ENST00000527836 PLEKHH1Q9ULM0 1364 aa18.12■□□□□ 0.49
SCN3B-204ENST00000527836 ADAMTS2O95450 1211 aa18.11■□□□□ 0.49
SCN3B-204ENST00000527836 DCAF11Q8TEB1 546 aa18.11■□□□□ 0.49
SCN3B-204ENST00000527836 POGKQ9P215 609 aa18.11■□□□□ 0.49
SCN3B-204ENST00000527836 AFF2P51816 1311 aa18.11■□□□□ 0.49
SCN3B-204ENST00000527836 SOS2Q07890 1332 aaPredicted RBP18.11■□□□□ 0.49
SCN3B-204ENST00000527836 NRXN1Q9ULB1 1477 aa18.1■□□□□ 0.49
SCN3B-204ENST00000527836 FOXO3O43524 673 aa18.1■□□□□ 0.49
SCN3B-204ENST00000527836 SAFB2Q14151 953 aaKnown RBP eCLIP18.1■□□□□ 0.49
SCN3B-204ENST00000527836 RXRBP28702 533 aa18.09■□□□□ 0.49
SCN3B-204ENST00000527836 XPCQ01831 940 aaPredicted RBP18.09■□□□□ 0.49
SCN3B-204ENST00000527836 SIRT1Q96EB6 747 aa18.09■□□□□ 0.49
SCN3B-204ENST00000527836 NGLY1Q96IV0 654 aa18.09■□□□□ 0.49
SCN3B-204ENST00000527836 PRAM1Q96QH2 718 aa18.08■□□□□ 0.48
SCN3B-204ENST00000527836 FMN2Q9NZ56 1722 aa18.07■□□□□ 0.48
SCN3B-204ENST00000527836 STAC3Q96MF2 364 aa18.06■□□□□ 0.48
SCN3B-204ENST00000527836 TRAK1Q9UPV9 953 aa18.05■□□□□ 0.48
SCN3B-204ENST00000527836 RGPD8O14715 1765 aaPredicted RBP18.04■□□□□ 0.48
SCN3B-204ENST00000527836 KIF1AQ12756 1690 aa18.04■□□□□ 0.48
SCN3B-204ENST00000527836 QTRT2Q9H974 415 aaKnown RBP18.03■□□□□ 0.48
SCN3B-204ENST00000527836 PXDNQ92626 1479 aa18.02■□□□□ 0.48
SCN3B-204ENST00000527836 PHF8Q9UPP1 1060 aa18.02■□□□□ 0.48
SCN3B-204ENST00000527836 USP21Q9UK80 565 aa18.01■□□□□ 0.47
SCN3B-204ENST00000527836 DLC1Q96QB1 1528 aa18.01■□□□□ 0.47
SCN3B-204ENST00000527836 COL22A1Q8NFW1 1626 aaPredicted RBP18.01■□□□□ 0.47
SCN3B-204ENST00000527836 HAP1P54257 671 aaPredicted RBP18■□□□□ 0.47
SCN3B-204ENST00000527836 RBM6P78332 1123 aaKnown RBP18■□□□□ 0.47
SCN3B-204ENST00000527836 PSME1Q06323 249 aa18■□□□□ 0.47
SCN3B-204ENST00000527836 KRT28Q7Z3Y7 464 aa18■□□□□ 0.47
SCN3B-204ENST00000527836 MINK1Q8N4C8 1332 aaPredicted RBP17.99■□□□□ 0.47
SCN3B-204ENST00000527836 LMOD2Q6P5Q4 547 aa17.99■□□□□ 0.47
SCN3B-204ENST00000527836 HIRIP3Q9BW71 556 aaPredicted RBP17.99■□□□□ 0.47
SCN3B-204ENST00000527836 ADGRB1O14514 1584 aa17.98■□□□□ 0.47
SCN3B-204ENST00000527836 CDK12Q9NYV4 1490 aaPredicted RBP17.97■□□□□ 0.47
SCN3B-204ENST00000527836 EIF3AQ14152 1382 aaKnown RBP17.97■□□□□ 0.47
SCN3B-204ENST00000527836 PLEKHG5O94827 1062 aa17.97■□□□□ 0.47
SCN3B-204ENST00000527836 TRPC5Q9UL62 973 aaPredicted RBP17.97■□□□□ 0.47
SCN3B-204ENST00000527836 MARF1Q9Y4F3 1742 aaKnown RBP17.96■□□□□ 0.47
SCN3B-204ENST00000527836 SPATA31A3Q5VYP0 1347 aa17.96■□□□□ 0.46
SCN3B-204ENST00000527836 PMFBP1Q8TBY8 1022 aa17.95■□□□□ 0.46
SCN3B-204ENST00000527836 ANKARQ7Z5J8 1434 aa17.95■□□□□ 0.46
SCN3B-204ENST00000527836 ADGRB2O60241 1585 aa17.94■□□□□ 0.46
SCN3B-204ENST00000527836 FNBP4Q8N3X1 1017 aaPredicted RBP17.93■□□□□ 0.46
SCN3B-204ENST00000527836 TNS3Q68CZ2 1445 aa17.92■□□□□ 0.46
SCN3B-204ENST00000527836 WASLO00401 505 aaPredicted RBP17.92■□□□□ 0.46
SCN3B-204ENST00000527836 GPRASP1Q5JY77 1395 aa17.91■□□□□ 0.46
SCN3B-204ENST00000527836 UPF1Q92900 1129 aaKnown RBP eCLIP17.91■□□□□ 0.46
SCN3B-204ENST00000527836 ARHGEF28Q8N1W1 1705 aaKnown RBP17.91■□□□□ 0.46
SCN3B-204ENST00000527836 RGS12O14924 1447 aa17.9■□□□□ 0.46
SCN3B-204ENST00000527836 NGDNQ8NEJ9 315 aaKnown RBP17.9■□□□□ 0.46
SCN3B-204ENST00000527836 USP32Q8NFA0 1604 aa17.9■□□□□ 0.46
SCN3B-204ENST00000527836 SBNO1A3KN83 1393 aa17.9■□□□□ 0.46
SCN3B-204ENST00000527836 ARHGEF10O15013 1369 aa17.9■□□□□ 0.46
SCN3B-204ENST00000527836 TULP4Q9NRJ4 1543 aa17.89■□□□□ 0.45
SCN3B-204ENST00000527836 KIAA1210Q9ULL0 1709 aa17.89■□□□□ 0.45
SCN3B-204ENST00000527836 CABLES1Q8TDN4 633 aa17.88■□□□□ 0.45
SCN3B-204ENST00000527836 PAK3O75914 559 aaPredicted RBP17.87■□□□□ 0.45
SCN3B-204ENST00000527836 ATRNO75882 1429 aa17.87■□□□□ 0.45
SCN3B-204ENST00000527836 ITSN1Q15811 1721 aa17.86■□□□□ 0.45
SCN3B-204ENST00000527836 PRR36Q9H6K5 1346 aa17.86■□□□□ 0.45
SCN3B-204ENST00000527836 NEUROD1Q13562 356 aa17.85■□□□□ 0.45
SCN3B-204ENST00000527836 BCL9LQ86UU0 1499 aa17.85■□□□□ 0.45
SCN3B-204ENST00000527836 UNC5CLQ8IV45 518 aa17.85■□□□□ 0.45
SCN3B-204ENST00000527836 ATAD2Q6PL18 1390 aa17.84■□□□□ 0.45
SCN3B-204ENST00000527836 NBPF1Q3BBV0 1214 aa17.84■□□□□ 0.45
SCN3B-204ENST00000527836 NUDT16Q96DE0 195 aaKnown RBP17.84■□□□□ 0.45
SCN3B-204ENST00000527836 GJD4Q96KN9 370 aaPredicted RBP17.84■□□□□ 0.45
SCN3B-204ENST00000527836 CDK19Q9BWU1 502 aa17.84■□□□□ 0.45
SCN3B-204ENST00000527836 CCDC9Q9Y3X0 531 aaKnown RBP17.84■□□□□ 0.45
SCN3B-204ENST00000527836 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.83■□□□□ 0.44
SCN3B-204ENST00000527836 ABCA3Q99758 1704 aa17.81■□□□□ 0.44
SCN3B-204ENST00000527836 TRPM3Q9HCF6 1732 aaPredicted RBP17.81■□□□□ 0.44
SCN3B-204ENST00000527836 L3MBTL2Q969R5 705 aa17.81■□□□□ 0.44
SCN3B-204ENST00000527836 SIN3AQ96ST3 1273 aa17.81■□□□□ 0.44
SCN3B-204ENST00000527836 SLIT2O94813 1529 aa17.81■□□□□ 0.44
SCN3B-204ENST00000527836 SRPK2P78362 688 aaKnown RBP17.8■□□□□ 0.44
SCN3B-204ENST00000527836 PLCH1Q4KWH8 1693 aa17.8■□□□□ 0.44
SCN3B-204ENST00000527836 CENPJQ9HC77 1338 aaPredicted RBP17.79■□□□□ 0.44
SCN3B-204ENST00000527836 ATP7BP35670 1465 aa17.79■□□□□ 0.44
SCN3B-204ENST00000527836 NWD2Q9ULI1 1742 aa17.78■□□□□ 0.44
SCN3B-204ENST00000527836 ALS2Q96Q42 1657 aa17.78■□□□□ 0.44
SCN3B-204ENST00000527836 CCDC61Q9Y6R9 512 aa17.78■□□□□ 0.44
SCN3B-204ENST00000527836 A0A0G2JS52 829 aa17.77■□□□□ 0.44
SCN3B-204ENST00000527836 MYT1Q01538 1121 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms