RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 ANKRD36BQ8N2N9 1353 aa20.21■□□□□ 0.83
USH1C-207ENST00000527720 NINLQ9Y2I6 1382 aa20.21■□□□□ 0.83
USH1C-207ENST00000527720 CLTCQ00610 1675 aaKnown RBP20.2■□□□□ 0.82
USH1C-207ENST00000527720 SLFN5Q08AF3 891 aa20.19■□□□□ 0.82
USH1C-207ENST00000527720 MORC1Q86VD1 984 aa20.19■□□□□ 0.82
USH1C-207ENST00000527720 TRMT2AQ8IZ69 625 aaKnown RBP20.19■□□□□ 0.82
USH1C-207ENST00000527720 CGNL1Q0VF96 1302 aa20.19■□□□□ 0.82
USH1C-207ENST00000527720 NUTM2DQ5VT03 806 aaPredicted RBP20.17■□□□□ 0.82
USH1C-207ENST00000527720 PTPRMP28827 1452 aa20.16■□□□□ 0.82
USH1C-207ENST00000527720 APAF1O14727 1248 aa20.15■□□□□ 0.82
USH1C-207ENST00000527720 CCDC146Q8IYE0 955 aa20.15■□□□□ 0.82
USH1C-207ENST00000527720 NKTRP30414 1462 aaKnown RBP20.15■□□□□ 0.82
USH1C-207ENST00000527720 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.15■□□□□ 0.82
USH1C-207ENST00000527720 SPATA31D1Q6ZQQ2 1576 aa20.14■□□□□ 0.82
USH1C-207ENST00000527720 ANKRD26Q9UPS8 1709 aa20.14■□□□□ 0.81
USH1C-207ENST00000527720 ALKQ9UM73 1620 aa20.14■□□□□ 0.81
USH1C-207ENST00000527720 MSH5O43196 834 aa20.14■□□□□ 0.81
USH1C-207ENST00000527720 E9PSI1 815 aa20.13■□□□□ 0.81
USH1C-207ENST00000527720 PLIN1O60240 522 aa20.13■□□□□ 0.81
USH1C-207ENST00000527720 YTHDC2Q9H6S0 1430 aaKnown RBP20.13■□□□□ 0.81
USH1C-207ENST00000527720 TCERG1O14776 1098 aaKnown RBP20.11■□□□□ 0.81
USH1C-207ENST00000527720 CRBNQ96SW2 442 aa20.11■□□□□ 0.81
USH1C-207ENST00000527720 ATAD2Q6PL18 1390 aa20.11■□□□□ 0.81
USH1C-207ENST00000527720 CFAP53Q96M91 514 aa20.1■□□□□ 0.81
USH1C-207ENST00000527720 ARHGEF40Q8TER5 1519 aa20.09■□□□□ 0.81
USH1C-207ENST00000527720 FBXO31Q5XUX0 539 aaPredicted RBP20.09■□□□□ 0.81
USH1C-207ENST00000527720 ABCC11Q96J66 1382 aa20.09■□□□□ 0.81
USH1C-207ENST00000527720 IQSEC2Q5JU85 1478 aa20.09■□□□□ 0.81
USH1C-207ENST00000527720 KIF13AQ9H1H9 1805 aa20.09■□□□□ 0.81
USH1C-207ENST00000527720 NCBP3Q53F19 620 aaKnown RBP20.08■□□□□ 0.81
USH1C-207ENST00000527720 CABP2Q9NPB3 220 aa20.08■□□□□ 0.81
USH1C-207ENST00000527720 SETD1AO15047 1707 aaKnown RBP20.08■□□□□ 0.8
USH1C-207ENST00000527720 DLC1Q96QB1 1528 aa20.08■□□□□ 0.8
USH1C-207ENST00000527720 RUNDC1Q96C34 613 aa20.07■□□□□ 0.8
USH1C-207ENST00000527720 MED14O60244 1454 aa20.07■□□□□ 0.8
USH1C-207ENST00000527720 MS4A1P11836 297 aa20.07■□□□□ 0.8
USH1C-207ENST00000527720 A2ML1A8K2U0 1454 aa20.07■□□□□ 0.8
USH1C-207ENST00000527720 A0A1W2PP64 1363 aa20.06■□□□□ 0.8
USH1C-207ENST00000527720 MTHFSP49914 203 aa20.06■□□□□ 0.8
USH1C-207ENST00000527720 STK26Q9P289 416 aa20.06■□□□□ 0.8
USH1C-207ENST00000527720 STAG3Q9UJ98 1225 aa20.05■□□□□ 0.8
USH1C-207ENST00000527720 WWC1Q8IX03 1113 aa20.05■□□□□ 0.8
USH1C-207ENST00000527720 SPINK5Q9NQ38 1064 aaPredicted RBP20.05■□□□□ 0.8
USH1C-207ENST00000527720 SRPK2P78362 688 aaKnown RBP20.04■□□□□ 0.8
USH1C-207ENST00000527720 TNNT2P45379 298 aaPredicted RBP20.04■□□□□ 0.8
USH1C-207ENST00000527720 C20orf194Q5TEA3 1177 aa20.04■□□□□ 0.8
USH1C-207ENST00000527720 PRAM1Q96QH2 718 aa20.04■□□□□ 0.8
USH1C-207ENST00000527720 POGKQ9P215 609 aa20.04■□□□□ 0.8
USH1C-207ENST00000527720 KIF20BQ96Q89 1820 aa20.03■□□□□ 0.8
USH1C-207ENST00000527720 TERF2IPQ9NYB0 399 aa20.03■□□□□ 0.8
USH1C-207ENST00000527720 SAFB2Q14151 953 aaKnown RBP eCLIP20.02■□□□□ 0.8
USH1C-207ENST00000527720 PHF23Q9BUL5 403 aaPredicted RBP20.02■□□□□ 0.8
USH1C-207ENST00000527720 CCDC27Q2M243 656 aa20.02■□□□□ 0.8
USH1C-207ENST00000527720 ERICH6Q7L0X2 663 aa20.02■□□□□ 0.8
USH1C-207ENST00000527720 CD163L1Q9NR16 1453 aa20.02■□□□□ 0.8
USH1C-207ENST00000527720 ADGRB2O60241 1585 aa20.02■□□□□ 0.79
USH1C-207ENST00000527720 RIMS2Q9UQ26 1411 aa20.01■□□□□ 0.79
USH1C-207ENST00000527720 WDR63Q8IWG1 891 aa20■□□□□ 0.79
USH1C-207ENST00000527720 KDM2BQ8NHM5 1336 aa20■□□□□ 0.79
USH1C-207ENST00000527720 MINK1Q8N4C8 1332 aaPredicted RBP19.99■□□□□ 0.79
USH1C-207ENST00000527720 ANP32AP39687 249 aaKnown RBP19.99■□□□□ 0.79
USH1C-207ENST00000527720 TCP11L2Q8N4U5 519 aa19.99■□□□□ 0.79
USH1C-207ENST00000527720 CENPQQ7L2Z9 268 aaPredicted RBP19.99■□□□□ 0.79
USH1C-207ENST00000527720 DMRT2Q9Y5R5 561 aa19.98■□□□□ 0.79
USH1C-207ENST00000527720 NLRP1Q9C000 1473 aa19.98■□□□□ 0.79
USH1C-207ENST00000527720 NRXN3Q9Y4C0 1643 aa19.97■□□□□ 0.79
USH1C-207ENST00000527720 HDGFL2Q7Z4V5 671 aaPredicted RBP19.96■□□□□ 0.79
USH1C-207ENST00000527720 KNDC1Q76NI1 1749 aa19.96■□□□□ 0.79
USH1C-207ENST00000527720 COL3A1P02461 1466 aaPredicted RBP19.96■□□□□ 0.79
USH1C-207ENST00000527720 PDE3AQ14432 1141 aa19.95■□□□□ 0.78
USH1C-207ENST00000527720 CDK19Q9BWU1 502 aa19.95■□□□□ 0.78
USH1C-207ENST00000527720 ATP7BP35670 1465 aa19.95■□□□□ 0.78
USH1C-207ENST00000527720 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.95■□□□□ 0.78
USH1C-207ENST00000527720 PDE4AP27815 886 aa19.94■□□□□ 0.78
USH1C-207ENST00000527720 BACH2Q9BYV9 841 aa19.94■□□□□ 0.78
USH1C-207ENST00000527720 FYB1O15117 783 aa19.93■□□□□ 0.78
USH1C-207ENST00000527720 BCAR3O75815 825 aa19.93■□□□□ 0.78
USH1C-207ENST00000527720 IPO9Q96P70 1041 aaKnown RBP19.92■□□□□ 0.78
USH1C-207ENST00000527720 U2AF1L5P0DN76 240 aaPredicted RBP19.92■□□□□ 0.78
USH1C-207ENST00000527720 U2AF1Q01081 240 aaKnown RBP eCLIP19.92■□□□□ 0.78
USH1C-207ENST00000527720 ZMYM3Q14202 1370 aa19.91■□□□□ 0.78
USH1C-207ENST00000527720 GGNBP2Q9H3C7 697 aa19.91■□□□□ 0.78
USH1C-207ENST00000527720 NOP58Q9Y2X3 529 aaKnown RBP19.91■□□□□ 0.78
USH1C-207ENST00000527720 NEUROD2Q15784 382 aa19.9■□□□□ 0.78
USH1C-207ENST00000527720 SENP3Q9H4L4 574 aaPredicted RBP19.9■□□□□ 0.78
USH1C-207ENST00000527720 ESF1Q9H501 851 aaKnown RBP19.9■□□□□ 0.78
USH1C-207ENST00000527720 MLECQ14165 292 aa19.9■□□□□ 0.78
USH1C-207ENST00000527720 RRP7AQ9Y3A4 280 aaKnown RBP19.9■□□□□ 0.78
USH1C-207ENST00000527720 HDGFP51858 240 aaKnown RBP19.89■□□□□ 0.77
USH1C-207ENST00000527720 MYH16Q9H6N6 1097 aa19.89■□□□□ 0.77
USH1C-207ENST00000527720 CDC42BPGQ6DT37 1551 aa19.89■□□□□ 0.77
USH1C-207ENST00000527720 PNPLA6Q8IY17 1366 aa19.89■□□□□ 0.77
USH1C-207ENST00000527720 AAMPQ13685 434 aa19.88■□□□□ 0.77
USH1C-207ENST00000527720 CABP1Q9NZU7 370 aa19.88■□□□□ 0.77
USH1C-207ENST00000527720 UBR1Q8IWV7 1749 aa19.88■□□□□ 0.77
USH1C-207ENST00000527720 SIRT1Q96EB6 747 aa19.87■□□□□ 0.77
USH1C-207ENST00000527720 TECPR2O15040 1411 aa19.87■□□□□ 0.77
USH1C-207ENST00000527720 FAM135BQ49AJ0 1406 aa19.87■□□□□ 0.77
USH1C-207ENST00000527720 CPS1P31327 1500 aa19.86■□□□□ 0.77
USH1C-207ENST00000527720 RARSP54136 660 aaKnown RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms