RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 RIMBP3Q9UFD9 1639 aa9.42□□□□□ -0.9
SOX6-208ENST00000527619 SPRYD3Q8NCJ5 442 aa9.42□□□□□ -0.9
SOX6-208ENST00000527619 DAPK1P53355 1430 aa9.42□□□□□ -0.9
SOX6-208ENST00000527619 MYCNP04198 464 aaPredicted RBP9.42□□□□□ -0.9
SOX6-208ENST00000527619 TERF1P54274 439 aa9.42□□□□□ -0.9
SOX6-208ENST00000527619 DUSP27Q5VZP5 1158 aa9.42□□□□□ -0.9
SOX6-208ENST00000527619 TBC1D32Q96NH3 1257 aa9.42□□□□□ -0.9
SOX6-208ENST00000527619 CHMP5Q9NZZ3 219 aa9.42□□□□□ -0.9
SOX6-208ENST00000527619 DDX11L8A8MPP1 907 aa9.41□□□□□ -0.9
SOX6-208ENST00000527619 DNTTIP2Q5QJE6 756 aaKnown RBP9.41□□□□□ -0.9
SOX6-208ENST00000527619 IQGAP2Q13576 1575 aa9.41□□□□□ -0.9
SOX6-208ENST00000527619 ST20-MTHFSA0A0A6YYL1 179 aa9.41□□□□□ -0.9
SOX6-208ENST00000527619 KIAA1107Q9UPP5 1409 aa9.41□□□□□ -0.9
SOX6-208ENST00000527619 DNMT1P26358 1616 aaKnown RBP9.41□□□□□ -0.9
SOX6-208ENST00000527619 DMTNQ08495 405 aa9.4□□□□□ -0.9
SOX6-208ENST00000527619 OFD1O75665 1012 aa9.4□□□□□ -0.9
SOX6-208ENST00000527619 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.4□□□□□ -0.9
SOX6-208ENST00000527619 SHROOM2Q13796 1616 aa9.4□□□□□ -0.9
SOX6-208ENST00000527619 PHF14O94880 888 aa9.39□□□□□ -0.91
SOX6-208ENST00000527619 IGHDP01880 384 aa9.39□□□□□ -0.91
SOX6-208ENST00000527619 RIPK4P57078 832 aa9.39□□□□□ -0.91
SOX6-208ENST00000527619 ARHGEF12Q9NZN5 1544 aa9.39□□□□□ -0.91
SOX6-208ENST00000527619 ERCC6L2Q5T890 1561 aa9.39□□□□□ -0.91
SOX6-208ENST00000527619 CARMIL2Q6F5E8 1435 aa9.39□□□□□ -0.91
SOX6-208ENST00000527619 ZMYM3Q14202 1370 aa9.39□□□□□ -0.91
SOX6-208ENST00000527619 CCDC144AA2RUR9 1427 aa9.39□□□□□ -0.91
SOX6-208ENST00000527619 PSEN1P49768 467 aa9.38□□□□□ -0.91
SOX6-208ENST00000527619 NEUROD2Q15784 382 aa9.38□□□□□ -0.91
SOX6-208ENST00000527619 PLEKHH1Q9ULM0 1364 aa9.38□□□□□ -0.91
SOX6-208ENST00000527619 PER1O15534 1290 aaPredicted RBP9.38□□□□□ -0.91
SOX6-208ENST00000527619 E9PSI1 815 aa9.38□□□□□ -0.91
SOX6-208ENST00000527619 GOLGA2Q08379 1002 aa9.38□□□□□ -0.91
SOX6-208ENST00000527619 CCDC173Q0VFZ6 552 aa9.38□□□□□ -0.91
SOX6-208ENST00000527619 ZSCAN30Q86W11 494 aa9.38□□□□□ -0.91
SOX6-208ENST00000527619 ABCC5O15440 1437 aa9.37□□□□□ -0.91
SOX6-208ENST00000527619 SOX12O15370 315 aa9.37□□□□□ -0.91
SOX6-208ENST00000527619 KIF20AO95235 890 aa9.37□□□□□ -0.91
SOX6-208ENST00000527619 OS9Q13438 667 aaPredicted RBP9.37□□□□□ -0.91
SOX6-208ENST00000527619 TAF3Q5VWG9 929 aa9.37□□□□□ -0.91
SOX6-208ENST00000527619 ZNF521Q96K83 1311 aa9.37□□□□□ -0.91
SOX6-208ENST00000527619 MTERF4Q7Z6M4 381 aaKnown RBP9.37□□□□□ -0.91
SOX6-208ENST00000527619 APBB1O00213 710 aa9.36□□□□□ -0.91
SOX6-208ENST00000527619 FAM13BQ9NYF5 915 aa9.36□□□□□ -0.91
SOX6-208ENST00000527619 CGNL1Q0VF96 1302 aa9.36□□□□□ -0.91
SOX6-208ENST00000527619 MSNP26038 577 aaKnown RBP9.36□□□□□ -0.91
SOX6-208ENST00000527619 CC2D1BQ5T0F9 858 aaKnown RBP9.36□□□□□ -0.91
SOX6-208ENST00000527619 PPP1R9BQ96SB3 815 aa9.36□□□□□ -0.91
SOX6-208ENST00000527619 ADAMTS8Q9UP79 889 aa9.36□□□□□ -0.91
SOX6-208ENST00000527619 SLFN5Q08AF3 891 aa9.35□□□□□ -0.91
SOX6-208ENST00000527619 GAS2L3Q86XJ1 694 aa9.35□□□□□ -0.91
SOX6-208ENST00000527619 PTPRGP23470 1445 aa9.35□□□□□ -0.91
SOX6-208ENST00000527619 EPRSP07814 1512 aaKnown RBP9.34□□□□□ -0.91
SOX6-208ENST00000527619 NKTRP30414 1462 aaKnown RBP9.34□□□□□ -0.91
SOX6-208ENST00000527619 NINLQ9Y2I6 1382 aa9.34□□□□□ -0.91
SOX6-208ENST00000527619 SKOR2Q2VWA4 1001 aaPredicted RBP9.34□□□□□ -0.91
SOX6-208ENST00000527619 CLUAP1Q96AJ1 413 aa9.34□□□□□ -0.91
SOX6-208ENST00000527619 DISP1Q96F81 1524 aa9.34□□□□□ -0.91
SOX6-208ENST00000527619 ADGBQ8N7X0 1667 aa9.34□□□□□ -0.92
SOX6-208ENST00000527619 TRMT2AQ8IZ69 625 aaKnown RBP9.33□□□□□ -0.92
SOX6-208ENST00000527619 PDE3AQ14432 1141 aa9.33□□□□□ -0.92
SOX6-208ENST00000527619 WDR43Q15061 677 aaKnown RBP eCLIP9.33□□□□□ -0.92
SOX6-208ENST00000527619 FAM177A1Q8N128 213 aaPredicted RBP9.33□□□□□ -0.92
SOX6-208ENST00000527619 R3HCC1Q9Y3T6 440 aaKnown RBP9.33□□□□□ -0.92
SOX6-208ENST00000527619 SCAPERQ9BY12 1400 aa9.33□□□□□ -0.92
SOX6-208ENST00000527619 COL17A1Q9UMD9 1497 aaPredicted RBP9.32□□□□□ -0.92
SOX6-208ENST00000527619 BCAR3O75815 825 aa9.32□□□□□ -0.92
SOX6-208ENST00000527619 RTEL1-TNFRSF6BF6WH68 1400 aa9.32□□□□□ -0.92
SOX6-208ENST00000527619 HSCBQ8IWL3 235 aa9.32□□□□□ -0.92
SOX6-208ENST00000527619 NCOA3Q9Y6Q9 1424 aa9.32□□□□□ -0.92
SOX6-208ENST00000527619 UQCRHLA0A096LP55 91 aa9.31□□□□□ -0.92
SOX6-208ENST00000527619 DYNC1I1O14576 645 aa9.31□□□□□ -0.92
SOX6-208ENST00000527619 UQCRHP07919 91 aa9.31□□□□□ -0.92
SOX6-208ENST00000527619 NASPP49321 788 aaPredicted RBP9.31□□□□□ -0.92
SOX6-208ENST00000527619 SETQ01105 290 aaPredicted RBP9.31□□□□□ -0.92
SOX6-208ENST00000527619 AEBP1Q8IUX7 1158 aa9.31□□□□□ -0.92
SOX6-208ENST00000527619 PMFBP1Q8TBY8 1022 aa9.31□□□□□ -0.92
SOX6-208ENST00000527619 GBP4Q96PP9 640 aa9.31□□□□□ -0.92
SOX6-208ENST00000527619 ANKRD30AQ9BXX3 1397 aa9.31□□□□□ -0.92
SOX6-208ENST00000527619 LETM1O95202 739 aaPredicted RBP9.31□□□□□ -0.92
SOX6-208ENST00000527619 HS1BP3Q53T59 392 aa9.31□□□□□ -0.92
SOX6-208ENST00000527619 C22orf23Q9BZE7 217 aa9.31□□□□□ -0.92
SOX6-208ENST00000527619 CDK13Q14004 1512 aaKnown RBP9.3□□□□□ -0.92
SOX6-208ENST00000527619 KIAA0556O60303 1618 aa9.3□□□□□ -0.92
SOX6-208ENST00000527619 DDIT3P35638 169 aa9.3□□□□□ -0.92
SOX6-208ENST00000527619 NGEFQ8N5V2 710 aa9.3□□□□□ -0.92
SOX6-208ENST00000527619 TRPM1Q7Z4N2 1603 aa9.3□□□□□ -0.92
SOX6-208ENST00000527619 TNPO1Q92973 898 aaKnown RBP9.3□□□□□ -0.92
SOX6-208ENST00000527619 GTPBP4Q9BZE4 634 aaKnown RBP9.3□□□□□ -0.92
SOX6-208ENST00000527619 ZNF500O60304 480 aaPredicted RBP9.29□□□□□ -0.92
SOX6-208ENST00000527619 PANK3Q9H999 370 aa9.29□□□□□ -0.92
SOX6-208ENST00000527619 CIZ1Q9ULV3 898 aaPredicted RBP9.29□□□□□ -0.92
SOX6-208ENST00000527619 PLXNC1O60486 1568 aa9.29□□□□□ -0.92
SOX6-208ENST00000527619 PDZRN3Q9UPQ7 1066 aa9.29□□□□□ -0.92
SOX6-208ENST00000527619 RGL2O15211 777 aa9.28□□□□□ -0.92
SOX6-208ENST00000527619 SLC20A2Q08357 652 aa9.28□□□□□ -0.92
SOX6-208ENST00000527619 IBTKQ9P2D0 1353 aaPredicted RBP9.28□□□□□ -0.92
SOX6-208ENST00000527619 DNAJC2Q99543 621 aaKnown RBP9.28□□□□□ -0.92
SOX6-208ENST00000527619 CCDC94Q9BW85 323 aaPredicted RBP9.28□□□□□ -0.92
SOX6-208ENST00000527619 CARD10Q9BWT7 1032 aa9.28□□□□□ -0.92
SOX6-208ENST00000527619 NOL7Q9UMY1 257 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms