RNA–Protein interactions for RNA: ENST00000527497.1

NXF1-205, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-205ENST00000527497 PNMA1Q8ND90 353 aa9.16□□□□□ -0.94
NXF1-205ENST00000527497 BCL2L13Q9BXK5 485 aa9.16□□□□□ -0.94
NXF1-205ENST00000527497 FDX1P10109 184 aa9.15□□□□□ -0.94
NXF1-205ENST00000527497 MYT1Q01538 1121 aa9.15□□□□□ -0.94
NXF1-205ENST00000527497 KANK4Q5T7N3 995 aaPredicted RBP9.15□□□□□ -0.94
NXF1-205ENST00000527497 C8orf37Q96NL8 207 aa9.15□□□□□ -0.94
NXF1-205ENST00000527497 ZMIZ1Q9ULJ6 1067 aa9.15□□□□□ -0.94
NXF1-205ENST00000527497 PCDHGA4Q9Y5G9 962 aa9.15□□□□□ -0.94
NXF1-205ENST00000527497 HOXA2O43364 376 aa9.14□□□□□ -0.95
NXF1-205ENST00000527497 EIF4G2P78344 907 aaKnown RBP eCLIP9.14□□□□□ -0.95
NXF1-205ENST00000527497 PHLDB3Q6NSJ2 640 aa9.14□□□□□ -0.95
NXF1-205ENST00000527497 LRRN4Q8WUT4 740 aa9.14□□□□□ -0.95
NXF1-205ENST00000527497 SOWAHDA6NJG2 315 aa9.13□□□□□ -0.95
NXF1-205ENST00000527497 STK32AQ8WU08 396 aa9.13□□□□□ -0.95
NXF1-205ENST00000527497 DRC1Q96MC2 740 aa9.13□□□□□ -0.95
NXF1-205ENST00000527497 NOVA2Q9UNW9 492 aaKnown RBP9.13□□□□□ -0.95
NXF1-205ENST00000527497 ATMINO43313 823 aaPredicted RBP9.12□□□□□ -0.95
NXF1-205ENST00000527497 SSFA2P28290 1259 aa9.12□□□□□ -0.95
NXF1-205ENST00000527497 RDH13Q8NBN7 331 aa9.12□□□□□ -0.95
NXF1-205ENST00000527497 TMEM134Q9H6X4 195 aa9.12□□□□□ -0.95
NXF1-205ENST00000527497 KDM4FA0A1W2PPD8 638 aa9.11□□□□□ -0.95
NXF1-205ENST00000527497 MTMR2Q13614 643 aa9.11□□□□□ -0.95
NXF1-205ENST00000527497 ZNF454Q8N9F8 522 aa9.11□□□□□ -0.95
NXF1-205ENST00000527497 GIPC2Q8TF65 315 aa9.11□□□□□ -0.95
NXF1-205ENST00000527497 SREK1Q8WXA9 508 aaKnown RBP9.11□□□□□ -0.95
NXF1-205ENST00000527497 VAMP1P23763 118 aa9.1□□□□□ -0.95
NXF1-205ENST00000527497 CLCN6P51797 869 aa9.1□□□□□ -0.95
NXF1-205ENST00000527497 MARSP56192 900 aaKnown RBP9.1□□□□□ -0.95
NXF1-205ENST00000527497 ASTLQ6HA08 431 aaPredicted RBP9.1□□□□□ -0.95
NXF1-205ENST00000527497 SLF2Q8IX21 1173 aa9.1□□□□□ -0.95
NXF1-205ENST00000527497 NFATC2IPQ8NCF5 419 aa9.1□□□□□ -0.95
NXF1-205ENST00000527497 TSC1Q92574 1164 aa9.1□□□□□ -0.95
NXF1-205ENST00000527497 FAM198AQ9UFP1 575 aa9.1□□□□□ -0.95
NXF1-205ENST00000527497 ZNF326Q5BKZ1 582 aaKnown RBP9.09□□□□□ -0.95
NXF1-205ENST00000527497 NOM1Q5C9Z4 860 aaKnown RBP9.09□□□□□ -0.95
NXF1-205ENST00000527497 EPS8L1Q8TE68 723 aa9.09□□□□□ -0.95
NXF1-205ENST00000527497 ADAM33Q9BZ11 813 aa9.09□□□□□ -0.95
NXF1-205ENST00000527497 PCDHGC3Q9UN70 934 aa9.09□□□□□ -0.95
NXF1-205ENST00000527497 NBPF26B4DH59 902 aa9.08□□□□□ -0.96
NXF1-205ENST00000527497 FAM196BA6NMK8 535 aa9.07□□□□□ -0.96
NXF1-205ENST00000527497 GCGRP47871 477 aa9.07□□□□□ -0.96
NXF1-205ENST00000527497 NUDT18Q6ZVK8 323 aa9.07□□□□□ -0.96
NXF1-205ENST00000527497 C3orf67Q6ZVT6 689 aa9.07□□□□□ -0.96
NXF1-205ENST00000527497 PLEKHM2Q8IWE5 1019 aa9.07□□□□□ -0.96
NXF1-205ENST00000527497 CLP1Q92989 425 aaKnown RBP9.07□□□□□ -0.96
NXF1-205ENST00000527497 USP17L3A6NCW0 530 aa9.06□□□□□ -0.96
NXF1-205ENST00000527497 USP17L4A6NCW7 530 aa9.06□□□□□ -0.96
NXF1-205ENST00000527497 USP17L2Q6R6M4 530 aa9.06□□□□□ -0.96
NXF1-205ENST00000527497 USP17L1Q7RTZ2 530 aa9.06□□□□□ -0.96
NXF1-205ENST00000527497 NPAS4Q8IUM7 802 aa9.06□□□□□ -0.96
NXF1-205ENST00000527497 CFAP99D6REC4 459 aa9.05□□□□□ -0.96
NXF1-205ENST00000527497 ZC3H6P61129 1189 aaKnown RBP9.05□□□□□ -0.96
NXF1-205ENST00000527497 ANKRD33BA6NCL7 494 aa9.04□□□□□ -0.96
NXF1-205ENST00000527497 USP17L15C9J2P7 530 aa9.04□□□□□ -0.96
NXF1-205ENST00000527497 USP17L10C9JJH3 530 aa9.04□□□□□ -0.96
NXF1-205ENST00000527497 USP17L13C9JLJ4 530 aa9.04□□□□□ -0.96
NXF1-205ENST00000527497 USP17L12C9JPN9 530 aa9.04□□□□□ -0.96
NXF1-205ENST00000527497 USP17L11C9JVI0 530 aa9.04□□□□□ -0.96
NXF1-205ENST00000527497 USP17L21D6R901 530 aa9.04□□□□□ -0.96
NXF1-205ENST00000527497 USP17L18D6R9N7 530 aa9.04□□□□□ -0.96
NXF1-205ENST00000527497 USP17L22D6RA61 530 aa9.04□□□□□ -0.96
NXF1-205ENST00000527497 USP17L17D6RBQ6 530 aa9.04□□□□□ -0.96
NXF1-205ENST00000527497 USP17L19D6RCP7 530 aa9.04□□□□□ -0.96
NXF1-205ENST00000527497 USP17L20D6RJB6 530 aa9.04□□□□□ -0.96
NXF1-205ENST00000527497 SEC24BO95487 1268 aa9.04□□□□□ -0.96
NXF1-205ENST00000527497 USP17L24Q0WX57 530 aa9.04□□□□□ -0.96
NXF1-205ENST00000527497 NR1H3Q13133 447 aa9.04□□□□□ -0.96
NXF1-205ENST00000527497 NR6A1Q15406 480 aa9.04□□□□□ -0.96
NXF1-205ENST00000527497 BIN2Q9UBW5 565 aaPredicted RBP9.04□□□□□ -0.96
NXF1-205ENST00000527497 SERPINB4P48594 390 aa9.03□□□□□ -0.96
NXF1-205ENST00000527497 GUCA2AQ02747 115 aa9.03□□□□□ -0.96
NXF1-205ENST00000527497 TSKSQ9UJT2 592 aa9.03□□□□□ -0.96
NXF1-205ENST00000527497 PNMA3Q9UL41 463 aa9.03□□□□□ -0.96
NXF1-205ENST00000527497 USP17L5A8MUK1 530 aa9.02□□□□□ -0.97
NXF1-205ENST00000527497 PIK3CDO00329 1044 aa9.02□□□□□ -0.97
NXF1-205ENST00000527497 ATP2B4P23634 1241 aa9.02□□□□□ -0.97
NXF1-205ENST00000527497 LARP1Q6PKG0 1096 aaKnown RBP9.02□□□□□ -0.97
NXF1-205ENST00000527497 FAM200AQ8TCP9 573 aa9.02□□□□□ -0.97
NXF1-205ENST00000527497 UBXN4Q92575 508 aa9.02□□□□□ -0.97
NXF1-205ENST00000527497 TATDN2Q93075 761 aa9.02□□□□□ -0.97
NXF1-205ENST00000527497 SPATA32Q96LK8 384 aa9.02□□□□□ -0.97
NXF1-205ENST00000527497 SLAIN2Q9P270 581 aa9.02□□□□□ -0.97
NXF1-205ENST00000527497 C6orf229H3BNL8 230 aa9.01□□□□□ -0.97
NXF1-205ENST00000527497 PPM1GO15355 546 aaPredicted RBP9.01□□□□□ -0.97
NXF1-205ENST00000527497 SKIP12755 728 aa9.01□□□□□ -0.97
NXF1-205ENST00000527497 FAM69CQ0P6D2 419 aa9.01□□□□□ -0.97
NXF1-205ENST00000527497 SF3A1Q15459 793 aaKnown RBP9.01□□□□□ -0.97
NXF1-205ENST00000527497 CDCA7Q9BWT1 371 aaPredicted RBP9.01□□□□□ -0.97
NXF1-205ENST00000527497 BCL11AQ9H165 835 aa9.01□□□□□ -0.97
NXF1-205ENST00000527497 EIF5BO60841 1220 aaKnown RBP9□□□□□ -0.97
NXF1-205ENST00000527497 CRTC2Q53ET0 693 aaPredicted RBP9□□□□□ -0.97
NXF1-205ENST00000527497 HLA-CQ95604 372 aa9□□□□□ -0.97
NXF1-205ENST00000527497 C3orf80F5H4A9 247 aa8.99□□□□□ -0.97
NXF1-205ENST00000527497 COL9A1P20849 921 aa8.99□□□□□ -0.97
NXF1-205ENST00000527497 PTK7Q13308 1070 aa8.99□□□□□ -0.97
NXF1-205ENST00000527497 PACS2Q86VP3 889 aa8.99□□□□□ -0.97
NXF1-205ENST00000527497 MKRN1Q9UHC7 482 aaKnown RBP8.99□□□□□ -0.97
NXF1-205ENST00000527497 TTBK1Q5TCY1 1321 aaPredicted RBP8.99□□□□□ -0.97
NXF1-205ENST00000527497 ATP5J2-PTCD1G3V325 749 aa8.98□□□□□ -0.97
NXF1-205ENST00000527497 SMARCA5O60264 1052 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms