RNA–Protein interactions for RNA: ENST00000527224.1

PACS1-205, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 2

Gene PACS1, Length 3,024 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-205ENST00000527224 ZSCAN23Q3MJ62 389 aa23.15■■□□□ 1.3
PACS1-205ENST00000527224 RBM27Q9P2N5 1060 aaKnown RBP23.15■■□□□ 1.3
PACS1-205ENST00000527224 KLHL40Q2TBA0 621 aa23.14■■□□□ 1.3
PACS1-205ENST00000527224 NCOA3Q9Y6Q9 1424 aa23.14■■□□□ 1.3
PACS1-205ENST00000527224 RWDD1Q9H446 243 aaPredicted RBP23.14■■□□□ 1.29
PACS1-205ENST00000527224 KIF20AO95235 890 aa23.14■■□□□ 1.29
PACS1-205ENST00000527224 RNF214Q8ND24 703 aa23.14■■□□□ 1.29
PACS1-205ENST00000527224 IPO4Q8TEX9 1081 aaKnown RBP23.14■■□□□ 1.29
PACS1-205ENST00000527224 KIAA0586Q9BVV6 1533 aa23.13■■□□□ 1.29
PACS1-205ENST00000527224 GTPBP4Q9BZE4 634 aaKnown RBP23.13■■□□□ 1.29
PACS1-205ENST00000527224 ZNF777Q9ULD5 760 aaPredicted RBP23.13■■□□□ 1.29
PACS1-205ENST00000527224 EPRSP07814 1512 aaKnown RBP23.12■■□□□ 1.29
PACS1-205ENST00000527224 BAG4O95429 457 aaKnown RBP23.12■■□□□ 1.29
PACS1-205ENST00000527224 HS1BP3Q53T59 392 aa23.12■■□□□ 1.29
PACS1-205ENST00000527224 PDLIM2Q96JY6 352 aa23.11■■□□□ 1.29
PACS1-205ENST00000527224 IFT140Q96RY7 1462 aa23.11■■□□□ 1.29
PACS1-205ENST00000527224 KNSTRNQ9Y448 316 aa23.11■■□□□ 1.29
PACS1-205ENST00000527224 CIZ1Q9ULV3 898 aaPredicted RBP23.1■■□□□ 1.29
PACS1-205ENST00000527224 LETM1O95202 739 aaPredicted RBP23.1■■□□□ 1.29
PACS1-205ENST00000527224 GAS2L2Q8NHY3 880 aa23.1■■□□□ 1.29
PACS1-205ENST00000527224 PTMAP06454 111 aaKnown RBP23.09■■□□□ 1.29
PACS1-205ENST00000527224 RRP7AQ9Y3A4 280 aaKnown RBP23.09■■□□□ 1.29
PACS1-205ENST00000527224 CHAMP1Q96JM3 812 aa23.08■■□□□ 1.29
PACS1-205ENST00000527224 C17orf53Q8N3J3 647 aaPredicted RBP23.08■■□□□ 1.29
PACS1-205ENST00000527224 TESK2Q96S53 571 aa23.08■■□□□ 1.29
PACS1-205ENST00000527224 MYRIPQ8NFW9 859 aa23.07■■□□□ 1.28
PACS1-205ENST00000527224 ZNF445P59923 1031 aa23.06■■□□□ 1.28
PACS1-205ENST00000527224 PTMSP20962 102 aa23.05■■□□□ 1.28
PACS1-205ENST00000527224 NUP155O75694 1391 aa23.05■■□□□ 1.28
PACS1-205ENST00000527224 CDK11BP21127 795 aaKnown RBP23.05■■□□□ 1.28
PACS1-205ENST00000527224 SNX21Q969T3 373 aa23.05■■□□□ 1.28
PACS1-205ENST00000527224 TAF7LQ5H9L4 462 aa23.04■■□□□ 1.28
PACS1-205ENST00000527224 AK9Q5TCS8 1911 aa23.04■■□□□ 1.28
PACS1-205ENST00000527224 RARSP54136 660 aaKnown RBP23.04■■□□□ 1.28
PACS1-205ENST00000527224 PKP1Q13835 747 aa23.03■■□□□ 1.28
PACS1-205ENST00000527224 SYCE3A1L190 88 aa23.03■■□□□ 1.28
PACS1-205ENST00000527224 U2AF2P26368 475 aaKnown RBP eCLIP23.03■■□□□ 1.28
PACS1-205ENST00000527224 CCDC39Q9UFE4 941 aa23.03■■□□□ 1.28
PACS1-205ENST00000527224 ZNF771Q7L3S4 317 aaPredicted RBP23.03■■□□□ 1.28
PACS1-205ENST00000527224 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.03■■□□□ 1.28
PACS1-205ENST00000527224 K7ELQ4 463 aaPredicted RBP23.02■■□□□ 1.28
PACS1-205ENST00000527224 TMF1P82094 1093 aa23.01■■□□□ 1.27
PACS1-205ENST00000527224 KIAA2012Q0VF49 1180 aa23.01■■□□□ 1.27
PACS1-205ENST00000527224 PRPF40AO75400 957 aaKnown RBP23.01■■□□□ 1.27
PACS1-205ENST00000527224 RBM25P49756 843 aaKnown RBP23.01■■□□□ 1.27
PACS1-205ENST00000527224 KIF2CQ99661 725 aa23■■□□□ 1.27
PACS1-205ENST00000527224 IBTKQ9P2D0 1353 aaPredicted RBP23■■□□□ 1.27
PACS1-205ENST00000527224 COL17A1Q9UMD9 1497 aaPredicted RBP23■■□□□ 1.27
PACS1-205ENST00000527224 WDR62O43379 1518 aa23■■□□□ 1.27
PACS1-205ENST00000527224 CHMP4AQ9BY43 222 aa22.99■■□□□ 1.27
PACS1-205ENST00000527224 WWC1Q8IX03 1113 aa22.99■■□□□ 1.27
PACS1-205ENST00000527224 GRIN2AQ12879 1464 aa22.99■■□□□ 1.27
PACS1-205ENST00000527224 LMBRD1Q9NUN5 540 aa22.98■■□□□ 1.27
PACS1-205ENST00000527224 EIF4G3O43432 1585 aaKnown RBP22.98■■□□□ 1.27
PACS1-205ENST00000527224 DISP1Q96F81 1524 aa22.98■■□□□ 1.27
PACS1-205ENST00000527224 FOXD4L5Q5VV16 416 aaPredicted RBP22.98■■□□□ 1.27
PACS1-205ENST00000527224 FOXD4L4Q8WXT5 416 aaPredicted RBP22.98■■□□□ 1.27
PACS1-205ENST00000527224 BCL2L12Q9HB09 334 aa22.98■■□□□ 1.27
PACS1-205ENST00000527224 LNPKQ9C0E8 428 aa22.97■■□□□ 1.27
PACS1-205ENST00000527224 ERBINQ96RT1 1412 aa22.97■■□□□ 1.27
PACS1-205ENST00000527224 DNMT1P26358 1616 aaKnown RBP22.97■■□□□ 1.27
PACS1-205ENST00000527224 MCM5P33992 734 aa22.97■■□□□ 1.27
PACS1-205ENST00000527224 GPT2Q8TD30 523 aa22.97■■□□□ 1.27
PACS1-205ENST00000527224 NSFL1CQ9UNZ2 370 aaKnown RBP22.96■■□□□ 1.27
PACS1-205ENST00000527224 PDCL2Q8N4E4 241 aa22.96■■□□□ 1.27
PACS1-205ENST00000527224 FTSJ3Q8IY81 847 aaKnown RBP22.95■■□□□ 1.27
PACS1-205ENST00000527224 ZMYM3Q14202 1370 aa22.95■■□□□ 1.27
PACS1-205ENST00000527224 MAGI2Q86UL8 1455 aa22.95■■□□□ 1.26
PACS1-205ENST00000527224 KIF3AQ9Y496 699 aa22.95■■□□□ 1.26
PACS1-205ENST00000527224 NINLQ9Y2I6 1382 aa22.95■■□□□ 1.26
PACS1-205ENST00000527224 TMEM63CQ9P1W3 806 aa22.95■■□□□ 1.26
PACS1-205ENST00000527224 ANKRD30AQ9BXX3 1397 aa22.94■■□□□ 1.26
PACS1-205ENST00000527224 JPH4Q96JJ6 628 aa22.94■■□□□ 1.26
PACS1-205ENST00000527224 PRG4Q92954 1404 aaPredicted RBP22.93■■□□□ 1.26
PACS1-205ENST00000527224 MVPQ14764 893 aaKnown RBP22.92■■□□□ 1.26
PACS1-205ENST00000527224 KCNJ4P48050 445 aa22.92■■□□□ 1.26
PACS1-205ENST00000527224 TTC12Q9H892 705 aaPredicted RBP22.92■■□□□ 1.26
PACS1-205ENST00000527224 NUP153P49790 1475 aaKnown RBP22.92■■□□□ 1.26
PACS1-205ENST00000527224 ARHGEF12Q9NZN5 1544 aa22.92■■□□□ 1.26
PACS1-205ENST00000527224 PLB1Q6P1J6 1458 aa22.91■■□□□ 1.26
PACS1-205ENST00000527224 FAM135AQ9P2D6 1515 aa22.91■■□□□ 1.26
PACS1-205ENST00000527224 CFDP1Q9UEE9 299 aaPredicted RBP22.91■■□□□ 1.26
PACS1-205ENST00000527224 KIAA0556O60303 1618 aa22.91■■□□□ 1.26
PACS1-205ENST00000527224 CERS3Q8IU89 383 aa22.9■■□□□ 1.26
PACS1-205ENST00000527224 IRX5P78411 483 aaPredicted RBP22.9■■□□□ 1.26
PACS1-205ENST00000527224 NOLC1Q14978 699 aaKnown RBP eCLIP22.9■■□□□ 1.26
PACS1-205ENST00000527224 PRAG1Q86YV5 1406 aa22.89■■□□□ 1.26
PACS1-205ENST00000527224 ITPRIPQ8IWB1 547 aa22.89■■□□□ 1.26
PACS1-205ENST00000527224 LRSAM1Q6UWE0 723 aa22.89■■□□□ 1.25
PACS1-205ENST00000527224 ANKRD50Q9ULJ7 1429 aa22.88■■□□□ 1.25
PACS1-205ENST00000527224 TPRNQ4KMQ1 711 aa22.88■■□□□ 1.25
PACS1-205ENST00000527224 PRIMPOLQ96LW4 560 aa22.88■■□□□ 1.25
PACS1-205ENST00000527224 CLASP1Q7Z460 1538 aa22.87■■□□□ 1.25
PACS1-205ENST00000527224 SCAPERQ9BY12 1400 aa22.86■■□□□ 1.25
PACS1-205ENST00000527224 HMGN5P82970 282 aaKnown RBP22.86■■□□□ 1.25
PACS1-205ENST00000527224 KIF16BQ96L93 1317 aa22.85■■□□□ 1.25
PACS1-205ENST00000527224 CLEC17AQ6ZS10 378 aa22.85■■□□□ 1.25
PACS1-205ENST00000527224 DZIP1LQ8IYY4 767 aaKnown RBP22.84■■□□□ 1.25
PACS1-205ENST00000527224 ZGPATQ8N5A5 531 aaKnown RBP22.84■■□□□ 1.25
PACS1-205ENST00000527224 GTF2F1P35269 517 aaKnown RBP eCLIP22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms