RNA–Protein interactions for RNA: ENST00000527079.2

PTPMT1-204, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best)

Gene PTPMT1, Length 2,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-204ENST00000527079 KDM2BQ8NHM5 1336 aa14.1□□□□□ -0.15
PTPMT1-204ENST00000527079 RAPGEF3O95398 923 aa14.1□□□□□ -0.15
PTPMT1-204ENST00000527079 SHPRHQ149N8 1683 aa14.1□□□□□ -0.15
PTPMT1-204ENST00000527079 EVC2Q86UK5 1308 aa14.1□□□□□ -0.15
PTPMT1-204ENST00000527079 TMEM132EQ6IEE7 984 aa14.1□□□□□ -0.15
PTPMT1-204ENST00000527079 SLC12A5Q9H2X9 1139 aa14.1□□□□□ -0.15
PTPMT1-204ENST00000527079 CGNL1Q0VF96 1302 aa14.09□□□□□ -0.15
PTPMT1-204ENST00000527079 PAK3O75914 559 aaPredicted RBP14.09□□□□□ -0.15
PTPMT1-204ENST00000527079 NSD2O96028 1365 aa14.09□□□□□ -0.15
PTPMT1-204ENST00000527079 SLC52A1Q9NWF4 448 aa14.08□□□□□ -0.15
PTPMT1-204ENST00000527079 ANKRD36BQ8N2N9 1353 aa14.07□□□□□ -0.16
PTPMT1-204ENST00000527079 SPINK5Q9NQ38 1064 aaPredicted RBP14.07□□□□□ -0.16
PTPMT1-204ENST00000527079 NINLQ9Y2I6 1382 aa14.07□□□□□ -0.16
PTPMT1-204ENST00000527079 TULP4Q9NRJ4 1543 aa14.07□□□□□ -0.16
PTPMT1-204ENST00000527079 NCBP3Q53F19 620 aaKnown RBP14.06□□□□□ -0.16
PTPMT1-204ENST00000527079 WWC1Q8IX03 1113 aa14.06□□□□□ -0.16
PTPMT1-204ENST00000527079 RUNDC1Q96C34 613 aa14.06□□□□□ -0.16
PTPMT1-204ENST00000527079 CFAP53Q96M91 514 aa14.05□□□□□ -0.16
PTPMT1-204ENST00000527079 IDI1Q13907 227 aa14.04□□□□□ -0.16
PTPMT1-204ENST00000527079 IQSEC2Q5JU85 1478 aa14.04□□□□□ -0.16
PTPMT1-204ENST00000527079 PREX1Q8TCU6 1659 aa14.04□□□□□ -0.16
PTPMT1-204ENST00000527079 PDE3AQ14432 1141 aa14.03□□□□□ -0.16
PTPMT1-204ENST00000527079 PHF23Q9BUL5 403 aaPredicted RBP14.03□□□□□ -0.16
PTPMT1-204ENST00000527079 TMEM131LA2VDJ0 1609 aa14.03□□□□□ -0.16
PTPMT1-204ENST00000527079 YEATS2Q9ULM3 1422 aa14.02□□□□□ -0.17
PTPMT1-204ENST00000527079 MYO5BQ9ULV0 1848 aa14.02□□□□□ -0.17
PTPMT1-204ENST00000527079 BCAR3O75815 825 aa14.02□□□□□ -0.17
PTPMT1-204ENST00000527079 MTHFSP49914 203 aa14.02□□□□□ -0.17
PTPMT1-204ENST00000527079 CCDC27Q2M243 656 aa14.02□□□□□ -0.17
PTPMT1-204ENST00000527079 NPM2Q86SE8 214 aaKnown RBP14.02□□□□□ -0.17
PTPMT1-204ENST00000527079 WDR63Q8IWG1 891 aa14.02□□□□□ -0.17
PTPMT1-204ENST00000527079 DMRT2Q9Y5R5 561 aa14.02□□□□□ -0.17
PTPMT1-204ENST00000527079 TNNT2P45379 298 aaPredicted RBP14.01□□□□□ -0.17
PTPMT1-204ENST00000527079 NUTM2DQ5VT03 806 aaPredicted RBP14.01□□□□□ -0.17
PTPMT1-204ENST00000527079 TCP11L2Q8N4U5 519 aa14□□□□□ -0.17
PTPMT1-204ENST00000527079 DDRGK1Q96HY6 314 aa13.99□□□□□ -0.17
PTPMT1-204ENST00000527079 ABCC11Q96J66 1382 aa13.99□□□□□ -0.17
PTPMT1-204ENST00000527079 ATAD2Q6PL18 1390 aa13.98□□□□□ -0.17
PTPMT1-204ENST00000527079 CLTCQ00610 1675 aaKnown RBP13.98□□□□□ -0.17
PTPMT1-204ENST00000527079 AAMPQ13685 434 aa13.98□□□□□ -0.17
PTPMT1-204ENST00000527079 CABP2Q9NPB3 220 aa13.98□□□□□ -0.17
PTPMT1-204ENST00000527079 PTPRMP28827 1452 aa13.98□□□□□ -0.17
PTPMT1-204ENST00000527079 FAM161AQ3B820 660 aa13.98□□□□□ -0.17
PTPMT1-204ENST00000527079 MED14O60244 1454 aa13.97□□□□□ -0.17
PTPMT1-204ENST00000527079 SKAP1Q86WV1 359 aa13.97□□□□□ -0.17
PTPMT1-204ENST00000527079 ADGRB2O60241 1585 aa13.96□□□□□ -0.17
PTPMT1-204ENST00000527079 ANKRD26Q9UPS8 1709 aa13.96□□□□□ -0.17
PTPMT1-204ENST00000527079 A0A1W2PP64 1363 aa13.96□□□□□ -0.17
PTPMT1-204ENST00000527079 YTHDC2Q9H6S0 1430 aaKnown RBP13.96□□□□□ -0.17
PTPMT1-204ENST00000527079 REREQ9P2R6 1566 aa13.96□□□□□ -0.18
PTPMT1-204ENST00000527079 CANXP27824 592 aaKnown RBP13.95□□□□□ -0.18
PTPMT1-204ENST00000527079 NBR1Q14596 966 aa13.95□□□□□ -0.18
PTPMT1-204ENST00000527079 PPP6R1Q9UPN7 881 aa13.95□□□□□ -0.18
PTPMT1-204ENST00000527079 RARSP54136 660 aaKnown RBP13.95□□□□□ -0.18
PTPMT1-204ENST00000527079 SRPK2P78362 688 aaKnown RBP13.95□□□□□ -0.18
PTPMT1-204ENST00000527079 NEUROD2Q15784 382 aa13.95□□□□□ -0.18
PTPMT1-204ENST00000527079 MYH16Q9H6N6 1097 aa13.95□□□□□ -0.18
PTPMT1-204ENST00000527079 TERF2IPQ9NYB0 399 aa13.95□□□□□ -0.18
PTPMT1-204ENST00000527079 CLUAP1Q96AJ1 413 aa13.94□□□□□ -0.18
PTPMT1-204ENST00000527079 RRP7AQ9Y3A4 280 aaKnown RBP13.94□□□□□ -0.18
PTPMT1-204ENST00000527079 RTL5Q5HYW3 569 aaPredicted RBP13.94□□□□□ -0.18
PTPMT1-204ENST00000527079 STK26Q9P289 416 aa13.94□□□□□ -0.18
PTPMT1-204ENST00000527079 U2AF1L5P0DN76 240 aaPredicted RBP13.93□□□□□ -0.18
PTPMT1-204ENST00000527079 U2AF1Q01081 240 aaKnown RBP eCLIP13.93□□□□□ -0.18
PTPMT1-204ENST00000527079 C8orf34Q49A92 452 aa13.93□□□□□ -0.18
PTPMT1-204ENST00000527079 ALKQ9UM73 1620 aa13.93□□□□□ -0.18
PTPMT1-204ENST00000527079 AGLP35573 1532 aa13.93□□□□□ -0.18
PTPMT1-204ENST00000527079 CT47B1P0C2W7 299 aaPredicted RBP13.93□□□□□ -0.18
PTPMT1-204ENST00000527079 SAFB2Q14151 953 aaKnown RBP eCLIP13.93□□□□□ -0.18
PTPMT1-204ENST00000527079 PRAM1Q96QH2 718 aa13.92□□□□□ -0.18
PTPMT1-204ENST00000527079 POGKQ9P215 609 aa13.92□□□□□ -0.18
PTPMT1-204ENST00000527079 COL3A1P02461 1466 aaPredicted RBP13.91□□□□□ -0.18
PTPMT1-204ENST00000527079 CD163L1Q9NR16 1453 aa13.91□□□□□ -0.18
PTPMT1-204ENST00000527079 VIRMAQ69YN4 1812 aaKnown RBP13.91□□□□□ -0.18
PTPMT1-204ENST00000527079 DIP2BQ9P265 1576 aa13.91□□□□□ -0.18
PTPMT1-204ENST00000527079 PPM1GO15355 546 aaPredicted RBP13.9□□□□□ -0.18
PTPMT1-204ENST00000527079 DEKP35659 375 aaKnown RBP13.9□□□□□ -0.18
PTPMT1-204ENST00000527079 PANK1Q8TE04 598 aa13.9□□□□□ -0.18
PTPMT1-204ENST00000527079 USP35Q9P2H5 1018 aa13.9□□□□□ -0.18
PTPMT1-204ENST00000527079 COG6Q9Y2V7 657 aa13.9□□□□□ -0.18
PTPMT1-204ENST00000527079 NLRP1Q9C000 1473 aa13.9□□□□□ -0.18
PTPMT1-204ENST00000527079 MINK1Q8N4C8 1332 aaPredicted RBP13.9□□□□□ -0.18
PTPMT1-204ENST00000527079 MAPK8IP3Q9UPT6 1336 aa13.9□□□□□ -0.18
PTPMT1-204ENST00000527079 DLC1Q96QB1 1528 aa13.9□□□□□ -0.18
PTPMT1-204ENST00000527079 IGHDP01880 384 aa13.9□□□□□ -0.18
PTPMT1-204ENST00000527079 RGS3P49796 1198 aa13.9□□□□□ -0.18
PTPMT1-204ENST00000527079 HDGFL2Q7Z4V5 671 aaPredicted RBP13.9□□□□□ -0.18
PTPMT1-204ENST00000527079 ARHGEF40Q8TER5 1519 aa13.9□□□□□ -0.18
PTPMT1-204ENST00000527079 FYB1O15117 783 aa13.89□□□□□ -0.19
PTPMT1-204ENST00000527079 FBXO31Q5XUX0 539 aaPredicted RBP13.89□□□□□ -0.19
PTPMT1-204ENST00000527079 PMFBP1Q8TBY8 1022 aa13.89□□□□□ -0.19
PTPMT1-204ENST00000527079 FRAT1Q92837 279 aaPredicted RBP13.89□□□□□ -0.19
PTPMT1-204ENST00000527079 GGNBP2Q9H3C7 697 aa13.89□□□□□ -0.19
PTPMT1-204ENST00000527079 KIF20BQ96Q89 1820 aa13.88□□□□□ -0.19
PTPMT1-204ENST00000527079 FAM69CQ0P6D2 419 aa13.88□□□□□ -0.19
PTPMT1-204ENST00000527079 CYB5RLQ6IPT4 315 aa13.88□□□□□ -0.19
PTPMT1-204ENST00000527079 PLEKHF1Q96S99 279 aa13.88□□□□□ -0.19
PTPMT1-204ENST00000527079 PNNQ9H307 717 aaKnown RBP13.88□□□□□ -0.19
PTPMT1-204ENST00000527079 STAG3Q9UJ98 1225 aa13.88□□□□□ -0.19
PTPMT1-204ENST00000527079 SPATA31D1Q6ZQQ2 1576 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms