RNA–Protein interactions for RNA: ENST00000526606.1

AMBRA1-205, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 4

Gene AMBRA1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-205ENST00000526606 GJD4Q96KN9 370 aaPredicted RBP30.03■■■□□ 2.4
AMBRA1-205ENST00000526606 PRAG1Q86YV5 1406 aa30.02■■■□□ 2.4
AMBRA1-205ENST00000526606 PXDNQ92626 1479 aa29.99■■■□□ 2.39
AMBRA1-205ENST00000526606 MARF1Q9Y4F3 1742 aaKnown RBP29.97■■■□□ 2.39
AMBRA1-205ENST00000526606 VGFO15240 615 aaPredicted RBP29.96■■■□□ 2.39
AMBRA1-205ENST00000526606 XPCQ01831 940 aaPredicted RBP29.96■■■□□ 2.39
AMBRA1-205ENST00000526606 ESCO1Q5FWF5 840 aa29.96■■■□□ 2.39
AMBRA1-205ENST00000526606 NPHP3Q7Z494 1330 aa29.96■■■□□ 2.39
AMBRA1-205ENST00000526606 KIF1BO60333 1816 aa29.95■■■□□ 2.39
AMBRA1-205ENST00000526606 HFM1A2PYH4 1435 aa29.95■■■□□ 2.38
AMBRA1-205ENST00000526606 FOXO3O43524 673 aa29.94■■■□□ 2.38
AMBRA1-205ENST00000526606 GLI3P10071 1580 aa29.91■■■□□ 2.38
AMBRA1-205ENST00000526606 DEFB132Q7Z7B7 95 aa29.91■■■□□ 2.38
AMBRA1-205ENST00000526606 BLMP54132 1417 aaPredicted RBP29.9■■■□□ 2.38
AMBRA1-205ENST00000526606 RALGAPBQ86X10 1494 aa29.89■■■□□ 2.38
AMBRA1-205ENST00000526606 UNC5CLQ8IV45 518 aa29.89■■■□□ 2.38
AMBRA1-205ENST00000526606 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.88■■■□□ 2.37
AMBRA1-205ENST00000526606 SLIT2O94813 1529 aa29.87■■■□□ 2.37
AMBRA1-205ENST00000526606 CDC42BPGQ6DT37 1551 aa29.86■■■□□ 2.37
AMBRA1-205ENST00000526606 BRWD3Q6RI45 1802 aa29.86■■■□□ 2.37
AMBRA1-205ENST00000526606 RPGRIP1LQ68CZ1 1315 aa29.85■■■□□ 2.37
AMBRA1-205ENST00000526606 NUTM2FA1L443 756 aa29.82■■■□□ 2.36
AMBRA1-205ENST00000526606 WAPLQ7Z5K2 1190 aa29.81■■■□□ 2.36
AMBRA1-205ENST00000526606 NAIPQ13075 1403 aa29.8■■■□□ 2.36
AMBRA1-205ENST00000526606 SPATA31A3Q5VYP0 1347 aa29.8■■■□□ 2.36
AMBRA1-205ENST00000526606 PPLO60437 1756 aa29.8■■■□□ 2.36
AMBRA1-205ENST00000526606 LRPPRCP42704 1394 aaKnown RBP29.78■■■□□ 2.36
AMBRA1-205ENST00000526606 SEPT12Q8IYM1 358 aa29.78■■■□□ 2.36
AMBRA1-205ENST00000526606 ONECUT3O60422 494 aaPredicted RBP29.76■■■□□ 2.35
AMBRA1-205ENST00000526606 PPARGC1BQ86YN6 1023 aaKnown RBP29.76■■■□□ 2.35
AMBRA1-205ENST00000526606 LRP5O75197 1615 aa29.74■■■□□ 2.35
AMBRA1-205ENST00000526606 STK26Q9P289 416 aa29.74■■■□□ 2.35
AMBRA1-205ENST00000526606 ADGRF5Q8IZF2 1346 aa29.73■■■□□ 2.35
AMBRA1-205ENST00000526606 PLEKHH1Q9ULM0 1364 aa29.73■■■□□ 2.35
AMBRA1-205ENST00000526606 USP32Q8NFA0 1604 aa29.72■■■□□ 2.35
AMBRA1-205ENST00000526606 VPS72Q15906 364 aa29.72■■■□□ 2.35
AMBRA1-205ENST00000526606 TECPR2O15040 1411 aa29.71■■■□□ 2.35
AMBRA1-205ENST00000526606 KRT28Q7Z3Y7 464 aa29.71■■■□□ 2.35
AMBRA1-205ENST00000526606 SF3B2Q13435 895 aaKnown RBP29.7■■■□□ 2.35
AMBRA1-205ENST00000526606 CABLES1Q8TDN4 633 aa29.7■■■□□ 2.35
AMBRA1-205ENST00000526606 PSDA5PKW4 1024 aaPredicted RBP29.67■■■□□ 2.34
AMBRA1-205ENST00000526606 KRT27Q7Z3Y8 459 aa29.67■■■□□ 2.34
AMBRA1-205ENST00000526606 FMN2Q9NZ56 1722 aa29.67■■■□□ 2.34
AMBRA1-205ENST00000526606 ABCC11Q96J66 1382 aa29.66■■■□□ 2.34
AMBRA1-205ENST00000526606 CCDC144AA2RUR9 1427 aa29.66■■■□□ 2.34
AMBRA1-205ENST00000526606 TMEM132EQ6IEE7 984 aa29.66■■■□□ 2.34
AMBRA1-205ENST00000526606 HRCP23327 699 aa29.65■■■□□ 2.34
AMBRA1-205ENST00000526606 SLC4A1APQ9BWU0 796 aaKnown RBP29.62■■■□□ 2.33
AMBRA1-205ENST00000526606 KIF1AQ12756 1690 aa29.62■■■□□ 2.33
AMBRA1-205ENST00000526606 RRBP1Q9P2E9 1410 aaKnown RBP29.62■■■□□ 2.33
AMBRA1-205ENST00000526606 PLCH1Q4KWH8 1693 aa29.61■■■□□ 2.33
AMBRA1-205ENST00000526606 NWD2Q9ULI1 1742 aa29.6■■■□□ 2.33
AMBRA1-205ENST00000526606 FAM83GA6ND36 823 aa29.6■■■□□ 2.33
AMBRA1-205ENST00000526606 CCDC9Q9Y3X0 531 aaKnown RBP29.6■■■□□ 2.33
AMBRA1-205ENST00000526606 TNS3Q68CZ2 1445 aa29.6■■■□□ 2.33
AMBRA1-205ENST00000526606 RGPD8O14715 1765 aaPredicted RBP29.59■■■□□ 2.33
AMBRA1-205ENST00000526606 PLEKHG5O94827 1062 aa29.59■■■□□ 2.33
AMBRA1-205ENST00000526606 KNDC1Q76NI1 1749 aa29.58■■■□□ 2.33
AMBRA1-205ENST00000526606 PHF8Q9UPP1 1060 aa29.58■■■□□ 2.33
AMBRA1-205ENST00000526606 HAP1P54257 671 aaPredicted RBP29.57■■■□□ 2.32
AMBRA1-205ENST00000526606 RGL3Q3MIN7 710 aa29.57■■■□□ 2.32
AMBRA1-205ENST00000526606 BAG6P46379 1132 aa29.56■■■□□ 2.32
AMBRA1-205ENST00000526606 SPATA31E1Q6ZUB1 1445 aa29.55■■■□□ 2.32
AMBRA1-205ENST00000526606 PSME1Q06323 249 aa29.55■■■□□ 2.32
AMBRA1-205ENST00000526606 ABCA3Q99758 1704 aa29.54■■■□□ 2.32
AMBRA1-205ENST00000526606 YTHDC2Q9H6S0 1430 aaKnown RBP29.54■■■□□ 2.32
AMBRA1-205ENST00000526606 SBNO1A3KN83 1393 aa29.53■■■□□ 2.32
AMBRA1-205ENST00000526606 EN1Q05925 392 aaPredicted RBP29.53■■■□□ 2.32
AMBRA1-205ENST00000526606 SIRT1Q96EB6 747 aa29.53■■■□□ 2.32
AMBRA1-205ENST00000526606 IFT172Q9UG01 1749 aa29.52■■■□□ 2.32
AMBRA1-205ENST00000526606 FAM98CQ17RN3 349 aaKnown RBP29.52■■■□□ 2.32
AMBRA1-205ENST00000526606 PIK3C2GO75747 1445 aa29.51■■■□□ 2.31
AMBRA1-205ENST00000526606 ANKRD30BQ9BXX2 1392 aa29.51■■■□□ 2.31
AMBRA1-205ENST00000526606 NRXN1Q9ULB1 1477 aa29.5■■■□□ 2.31
AMBRA1-205ENST00000526606 FAM182BQ5T319 152 aa29.49■■■□□ 2.31
AMBRA1-205ENST00000526606 LMOD2Q6P5Q4 547 aa29.49■■■□□ 2.31
AMBRA1-205ENST00000526606 NRAPQ86VF7 1730 aa29.48■■■□□ 2.31
AMBRA1-205ENST00000526606 R3HDM1Q15032 1099 aaKnown RBP29.47■■■□□ 2.31
AMBRA1-205ENST00000526606 A0A0G2JS52 829 aa29.46■■■□□ 2.31
AMBRA1-205ENST00000526606 MYT1Q01538 1121 aa29.46■■■□□ 2.31
AMBRA1-205ENST00000526606 BTG4Q9NY30 223 aa29.46■■■□□ 2.31
AMBRA1-205ENST00000526606 ARHGEF10O15013 1369 aa29.46■■■□□ 2.31
AMBRA1-205ENST00000526606 PMFBP1Q8TBY8 1022 aa29.43■■■□□ 2.3
AMBRA1-205ENST00000526606 C14orf93Q9H972 538 aaKnown RBP29.43■■■□□ 2.3
AMBRA1-205ENST00000526606 RGPD1P0DJD0 1748 aa29.4■■■□□ 2.3
AMBRA1-205ENST00000526606 DISP2A7MBM2 1401 aa29.39■■■□□ 2.3
AMBRA1-205ENST00000526606 SAFB2Q14151 953 aaKnown RBP eCLIP29.39■■■□□ 2.3
AMBRA1-205ENST00000526606 EZH2Q15910 746 aaKnown RBP29.39■■■□□ 2.3
AMBRA1-205ENST00000526606 SPATA31A5Q5VU36 1347 aa29.39■■■□□ 2.3
AMBRA1-205ENST00000526606 SPATA31A7Q8IWB4 1347 aa29.39■■■□□ 2.3
AMBRA1-205ENST00000526606 PRAM1Q96QH2 718 aa29.38■■■□□ 2.29
AMBRA1-205ENST00000526606 TRPM3Q9HCF6 1732 aaPredicted RBP29.37■■■□□ 2.29
AMBRA1-205ENST00000526606 CFAP70Q5T0N1 1121 aa29.37■■■□□ 2.29
AMBRA1-205ENST00000526606 TNS1Q9HBL0 1735 aaKnown RBP29.37■■■□□ 2.29
AMBRA1-205ENST00000526606 COL14A1Q05707 1796 aaKnown RBP29.35■■■□□ 2.29
AMBRA1-205ENST00000526606 CAMKK2Q96RR4 588 aa29.35■■■□□ 2.29
AMBRA1-205ENST00000526606 THSD7AQ9UPZ6 1657 aa29.34■■■□□ 2.29
AMBRA1-205ENST00000526606 DHX57Q6P158 1386 aaKnown RBP29.33■■■□□ 2.29
AMBRA1-205ENST00000526606 ALS2Q96Q42 1657 aa29.33■■■□□ 2.29
AMBRA1-205ENST00000526606 MPHOSPH9Q99550 1183 aa29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms