RNA–Protein interactions for RNA: ENST00000526545.5

AMBRA1-204, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 837 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-204ENST00000526545 IFT172Q9UG01 1749 aa16.42■□□□□ 0.22
AMBRA1-204ENST00000526545 SIRT1Q96EB6 747 aa16.41■□□□□ 0.22
AMBRA1-204ENST00000526545 STK26Q9P289 416 aa16.41■□□□□ 0.22
AMBRA1-204ENST00000526545 CDC42BPGQ6DT37 1551 aa16.41■□□□□ 0.22
AMBRA1-204ENST00000526545 AFF2P51816 1311 aa16.41■□□□□ 0.22
AMBRA1-204ENST00000526545 ESCO1Q5FWF5 840 aa16.39■□□□□ 0.21
AMBRA1-204ENST00000526545 TMEM132EQ6IEE7 984 aa16.39■□□□□ 0.21
AMBRA1-204ENST00000526545 WAPLQ7Z5K2 1190 aa16.39■□□□□ 0.21
AMBRA1-204ENST00000526545 NPHP3Q7Z494 1330 aa16.39■□□□□ 0.21
AMBRA1-204ENST00000526545 RAB3GAP2Q9H2M9 1393 aa16.38■□□□□ 0.21
AMBRA1-204ENST00000526545 CDK12Q9NYV4 1490 aaPredicted RBP16.38■□□□□ 0.21
AMBRA1-204ENST00000526545 C8orf37Q96NL8 207 aa16.38■□□□□ 0.21
AMBRA1-204ENST00000526545 C14orf93Q9H972 538 aaKnown RBP16.38■□□□□ 0.21
AMBRA1-204ENST00000526545 YTHDC2Q9H6S0 1430 aaKnown RBP16.37■□□□□ 0.21
AMBRA1-204ENST00000526545 NGLY1Q96IV0 654 aa16.36■□□□□ 0.21
AMBRA1-204ENST00000526545 QTRT2Q9H974 415 aaKnown RBP16.36■□□□□ 0.21
AMBRA1-204ENST00000526545 KNDC1Q76NI1 1749 aa16.36■□□□□ 0.21
AMBRA1-204ENST00000526545 MYOM2P54296 1465 aa16.35■□□□□ 0.21
AMBRA1-204ENST00000526545 NRXN1Q9ULB1 1477 aa16.35■□□□□ 0.21
AMBRA1-204ENST00000526545 HRCP23327 699 aa16.35■□□□□ 0.21
AMBRA1-204ENST00000526545 DHX57Q6P158 1386 aaKnown RBP16.35■□□□□ 0.21
AMBRA1-204ENST00000526545 FOXO3O43524 673 aa16.34■□□□□ 0.21
AMBRA1-204ENST00000526545 ADAMTS2O95450 1211 aa16.34■□□□□ 0.21
AMBRA1-204ENST00000526545 RBM6P78332 1123 aaKnown RBP16.34■□□□□ 0.21
AMBRA1-204ENST00000526545 STAC3Q96MF2 364 aa16.33■□□□□ 0.2
AMBRA1-204ENST00000526545 PLEKHH1Q9ULM0 1364 aa16.33■□□□□ 0.2
AMBRA1-204ENST00000526545 CFAP70Q5T0N1 1121 aa16.32■□□□□ 0.2
AMBRA1-204ENST00000526545 COL22A1Q8NFW1 1626 aaPredicted RBP16.32■□□□□ 0.2
AMBRA1-204ENST00000526545 PXDNQ92626 1479 aa16.32■□□□□ 0.2
AMBRA1-204ENST00000526545 FNBP4Q8N3X1 1017 aaPredicted RBP16.31■□□□□ 0.2
AMBRA1-204ENST00000526545 UPF1Q92900 1129 aaKnown RBP eCLIP16.31■□□□□ 0.2
AMBRA1-204ENST00000526545 NUTM2FA1L443 756 aa16.3■□□□□ 0.2
AMBRA1-204ENST00000526545 USP21Q9UK80 565 aa16.3■□□□□ 0.2
AMBRA1-204ENST00000526545 FMN2Q9NZ56 1722 aa16.28■□□□□ 0.2
AMBRA1-204ENST00000526545 PRAM1Q96QH2 718 aa16.28■□□□□ 0.2
AMBRA1-204ENST00000526545 TRPC5Q9UL62 973 aaPredicted RBP16.28■□□□□ 0.2
AMBRA1-204ENST00000526545 XPCQ01831 940 aaPredicted RBP16.27■□□□□ 0.2
AMBRA1-204ENST00000526545 KIF1AQ12756 1690 aa16.27■□□□□ 0.19
AMBRA1-204ENST00000526545 SPATA31A3Q5VYP0 1347 aa16.26■□□□□ 0.19
AMBRA1-204ENST00000526545 DLC1Q96QB1 1528 aa16.26■□□□□ 0.19
AMBRA1-204ENST00000526545 PSME1Q06323 249 aa16.26■□□□□ 0.19
AMBRA1-204ENST00000526545 KRT28Q7Z3Y7 464 aa16.26■□□□□ 0.19
AMBRA1-204ENST00000526545 DCAF11Q8TEB1 546 aa16.26■□□□□ 0.19
AMBRA1-204ENST00000526545 POGKQ9P215 609 aa16.26■□□□□ 0.19
AMBRA1-204ENST00000526545 PHF8Q9UPP1 1060 aa16.25■□□□□ 0.19
AMBRA1-204ENST00000526545 KDM2AQ9Y2K7 1162 aa16.24■□□□□ 0.19
AMBRA1-204ENST00000526545 RGS12O14924 1447 aa16.24■□□□□ 0.19
AMBRA1-204ENST00000526545 SAFB2Q14151 953 aaKnown RBP eCLIP16.23■□□□□ 0.19
AMBRA1-204ENST00000526545 ADGRB1O14514 1584 aa16.22■□□□□ 0.19
AMBRA1-204ENST00000526545 ATRNO75882 1429 aa16.22■□□□□ 0.19
AMBRA1-204ENST00000526545 ANKARQ7Z5J8 1434 aa16.21■□□□□ 0.19
AMBRA1-204ENST00000526545 TRAK1Q9UPV9 953 aa16.21■□□□□ 0.19
AMBRA1-204ENST00000526545 BCL9LQ86UU0 1499 aa16.21■□□□□ 0.19
AMBRA1-204ENST00000526545 SBNO1A3KN83 1393 aa16.2■□□□□ 0.18
AMBRA1-204ENST00000526545 EIF3AQ14152 1382 aaKnown RBP16.2■□□□□ 0.18
AMBRA1-204ENST00000526545 MARF1Q9Y4F3 1742 aaKnown RBP16.19■□□□□ 0.18
AMBRA1-204ENST00000526545 ADGRB2O60241 1585 aa16.19■□□□□ 0.18
AMBRA1-204ENST00000526545 TNS3Q68CZ2 1445 aa16.19■□□□□ 0.18
AMBRA1-204ENST00000526545 ARHGEF10O15013 1369 aa16.18■□□□□ 0.18
AMBRA1-204ENST00000526545 ATAD2Q6PL18 1390 aa16.18■□□□□ 0.18
AMBRA1-204ENST00000526545 GJD4Q96KN9 370 aaPredicted RBP16.18■□□□□ 0.18
AMBRA1-204ENST00000526545 HAP1P54257 671 aaPredicted RBP16.17■□□□□ 0.18
AMBRA1-204ENST00000526545 UNC5CLQ8IV45 518 aa16.17■□□□□ 0.18
AMBRA1-204ENST00000526545 RGPD8O14715 1765 aaPredicted RBP16.17■□□□□ 0.18
AMBRA1-204ENST00000526545 WASLO00401 505 aaPredicted RBP16.16■□□□□ 0.18
AMBRA1-204ENST00000526545 PMFBP1Q8TBY8 1022 aa16.16■□□□□ 0.18
AMBRA1-204ENST00000526545 HIRIP3Q9BW71 556 aaPredicted RBP16.16■□□□□ 0.18
AMBRA1-204ENST00000526545 MINK1Q8N4C8 1332 aaPredicted RBP16.16■□□□□ 0.18
AMBRA1-204ENST00000526545 SLIT2O94813 1529 aa16.15■□□□□ 0.18
AMBRA1-204ENST00000526545 LMOD2Q6P5Q4 547 aa16.14■□□□□ 0.17
AMBRA1-204ENST00000526545 USP32Q8NFA0 1604 aa16.14■□□□□ 0.17
AMBRA1-204ENST00000526545 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.14■□□□□ 0.17
AMBRA1-204ENST00000526545 GPRASP1Q5JY77 1395 aa16.13■□□□□ 0.17
AMBRA1-204ENST00000526545 TRIM26Q12899 539 aaPredicted RBP16.13■□□□□ 0.17
AMBRA1-204ENST00000526545 CCDC125Q86Z20 511 aa16.13■□□□□ 0.17
AMBRA1-204ENST00000526545 CABLES1Q8TDN4 633 aa16.13■□□□□ 0.17
AMBRA1-204ENST00000526545 TULP4Q9NRJ4 1543 aa16.13■□□□□ 0.17
AMBRA1-204ENST00000526545 PRR36Q9H6K5 1346 aa16.11■□□□□ 0.17
AMBRA1-204ENST00000526545 VPS72Q15906 364 aa16.1■□□□□ 0.17
AMBRA1-204ENST00000526545 NGDNQ8NEJ9 315 aaKnown RBP16.1■□□□□ 0.17
AMBRA1-204ENST00000526545 RALGAPBQ86X10 1494 aa16.1■□□□□ 0.17
AMBRA1-204ENST00000526545 FAM83GA6ND36 823 aa16.08■□□□□ 0.16
AMBRA1-204ENST00000526545 NUDT16Q96DE0 195 aaKnown RBP16.08■□□□□ 0.16
AMBRA1-204ENST00000526545 EP400Q96L91 3159 aa16.08■□□□□ 0.16
AMBRA1-204ENST00000526545 ONECUT3O60422 494 aaPredicted RBP16.07■□□□□ 0.16
AMBRA1-204ENST00000526545 PLEKHG5O94827 1062 aa16.07■□□□□ 0.16
AMBRA1-204ENST00000526545 ARHGEF28Q8N1W1 1705 aaKnown RBP16.07■□□□□ 0.16
AMBRA1-204ENST00000526545 TRPM3Q9HCF6 1732 aaPredicted RBP16.07■□□□□ 0.16
AMBRA1-204ENST00000526545 NWD2Q9ULI1 1742 aa16.07■□□□□ 0.16
AMBRA1-204ENST00000526545 KIAA1210Q9ULL0 1709 aa16.07■□□□□ 0.16
AMBRA1-204ENST00000526545 GLI3P10071 1580 aa16.06■□□□□ 0.16
AMBRA1-204ENST00000526545 CDK19Q9BWU1 502 aa16.06■□□□□ 0.16
AMBRA1-204ENST00000526545 ABCA3Q99758 1704 aa16.05■□□□□ 0.16
AMBRA1-204ENST00000526545 PAK3O75914 559 aaPredicted RBP16.05■□□□□ 0.16
AMBRA1-204ENST00000526545 ALS2Q96Q42 1657 aa16.05■□□□□ 0.16
AMBRA1-204ENST00000526545 ATP7BP35670 1465 aa16.04■□□□□ 0.16
AMBRA1-204ENST00000526545 SEPT12Q8IYM1 358 aa16.04■□□□□ 0.16
AMBRA1-204ENST00000526545 CCDC9Q9Y3X0 531 aaKnown RBP16.04■□□□□ 0.16
AMBRA1-204ENST00000526545 CCDC61Q9Y6R9 512 aa16.04■□□□□ 0.16
AMBRA1-204ENST00000526545 PLCH1Q4KWH8 1693 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms