RNA–Protein interactions for RNA: ENST00000526510.5

PPP1CA-204, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best)

Gene PPP1CA, Length 1,677 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-204ENST00000526510 ANKLE2Q86XL3 938 aa27.26■■□□□ 1.95
PPP1CA-204ENST00000526510 PUS7Q96PZ0 661 aaKnown RBP27.26■■□□□ 1.95
PPP1CA-204ENST00000526510 XRN1Q8IZH2 1706 aaKnown RBP27.25■■□□□ 1.95
PPP1CA-204ENST00000526510 ROBO2Q9HCK4 1378 aa27.24■■□□□ 1.95
PPP1CA-204ENST00000526510 CNGB1Q14028 1251 aaPredicted RBP27.23■■□□□ 1.95
PPP1CA-204ENST00000526510 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.23■■□□□ 1.95
PPP1CA-204ENST00000526510 CHD2O14647 1828 aaKnown RBP27.22■■□□□ 1.95
PPP1CA-204ENST00000526510 CABP2Q9NPB3 220 aa27.22■■□□□ 1.95
PPP1CA-204ENST00000526510 YTHDC1Q96MU7 727 aaKnown RBP27.21■■□□□ 1.95
PPP1CA-204ENST00000526510 CCDC184Q52MB2 194 aa27.19■■□□□ 1.94
PPP1CA-204ENST00000526510 SLC12A5Q9H2X9 1139 aa27.17■■□□□ 1.94
PPP1CA-204ENST00000526510 AMOTL2Q9Y2J4 779 aa27.17■■□□□ 1.94
PPP1CA-204ENST00000526510 CDK19Q9BWU1 502 aa27.17■■□□□ 1.94
PPP1CA-204ENST00000526510 ADGRB2O60241 1585 aa27.16■■□□□ 1.94
PPP1CA-204ENST00000526510 KTN1Q86UP2 1357 aaKnown RBP27.16■■□□□ 1.94
PPP1CA-204ENST00000526510 PARD3Q8TEW0 1356 aa27.16■■□□□ 1.94
PPP1CA-204ENST00000526510 SRPK2P78362 688 aaKnown RBP27.16■■□□□ 1.94
PPP1CA-204ENST00000526510 CARD14Q9BXL6 1004 aa27.16■■□□□ 1.94
PPP1CA-204ENST00000526510 NPHP4O75161 1426 aaPredicted RBP27.15■■□□□ 1.94
PPP1CA-204ENST00000526510 PTCH1Q13635 1447 aa27.15■■□□□ 1.94
PPP1CA-204ENST00000526510 PIK3R4Q99570 1358 aa27.15■■□□□ 1.94
PPP1CA-204ENST00000526510 TMC1Q8TDI8 760 aa27.14■■□□□ 1.94
PPP1CA-204ENST00000526510 AMER1Q5JTC6 1135 aaPredicted RBP27.13■■□□□ 1.93
PPP1CA-204ENST00000526510 KNSTRNQ9Y448 316 aa27.13■■□□□ 1.93
PPP1CA-204ENST00000526510 ATAD2Q6PL18 1390 aa27.13■■□□□ 1.93
PPP1CA-204ENST00000526510 NCKAP5LQ9HCH0 1330 aa27.12■■□□□ 1.93
PPP1CA-204ENST00000526510 RALBP1Q15311 655 aa27.12■■□□□ 1.93
PPP1CA-204ENST00000526510 CC2D1BQ5T0F9 858 aaKnown RBP27.11■■□□□ 1.93
PPP1CA-204ENST00000526510 USP32Q8NFA0 1604 aa27.1■■□□□ 1.93
PPP1CA-204ENST00000526510 WASLO00401 505 aaPredicted RBP27.1■■□□□ 1.93
PPP1CA-204ENST00000526510 NINLQ9Y2I6 1382 aa27.09■■□□□ 1.93
PPP1CA-204ENST00000526510 ANKRD36BQ8N2N9 1353 aa27.08■■□□□ 1.93
PPP1CA-204ENST00000526510 NPC1L1Q9UHC9 1359 aa27.08■■□□□ 1.93
PPP1CA-204ENST00000526510 CD163L1Q9NR16 1453 aa27.08■■□□□ 1.93
PPP1CA-204ENST00000526510 MYBBP1AQ9BQG0 1328 aaKnown RBP27.07■■□□□ 1.92
PPP1CA-204ENST00000526510 KCNA6P17658 529 aa27.07■■□□□ 1.92
PPP1CA-204ENST00000526510 NSD3Q9BZ95 1437 aa27.07■■□□□ 1.92
PPP1CA-204ENST00000526510 MRS2Q9HD23 443 aa27.05■■□□□ 1.92
PPP1CA-204ENST00000526510 LMTK3Q96Q04 1460 aa27.04■■□□□ 1.92
PPP1CA-204ENST00000526510 A0A1W2PP64 1363 aa27.03■■□□□ 1.92
PPP1CA-204ENST00000526510 TOPAZ1Q8N9V7 1692 aa27.03■■□□□ 1.92
PPP1CA-204ENST00000526510 ATP7BP35670 1465 aa27.02■■□□□ 1.92
PPP1CA-204ENST00000526510 NWD1Q149M9 1564 aa27.01■■□□□ 1.92
PPP1CA-204ENST00000526510 NALCNQ8IZF0 1738 aa27.01■■□□□ 1.91
PPP1CA-204ENST00000526510 RGPD8O14715 1765 aaPredicted RBP27.01■■□□□ 1.91
PPP1CA-204ENST00000526510 HSPA2P54652 639 aa27■■□□□ 1.91
PPP1CA-204ENST00000526510 CABP1Q9NZU7 370 aa27■■□□□ 1.91
PPP1CA-204ENST00000526510 AKAP12Q02952 1782 aa26.99■■□□□ 1.91
PPP1CA-204ENST00000526510 STRCQ7RTU9 1775 aa26.99■■□□□ 1.91
PPP1CA-204ENST00000526510 BRD4O60885 1362 aaPredicted RBP26.99■■□□□ 1.91
PPP1CA-204ENST00000526510 PRR36Q9H6K5 1346 aa26.98■■□□□ 1.91
PPP1CA-204ENST00000526510 ITSN1Q15811 1721 aa26.98■■□□□ 1.91
PPP1CA-204ENST00000526510 NUDT16Q96DE0 195 aaKnown RBP26.98■■□□□ 1.91
PPP1CA-204ENST00000526510 PPIP5K1Q6PFW1 1433 aa26.97■■□□□ 1.91
PPP1CA-204ENST00000526510 KIF20BQ96Q89 1820 aa26.96■■□□□ 1.91
PPP1CA-204ENST00000526510 MON2Q7Z3U7 1717 aa26.96■■□□□ 1.91
PPP1CA-204ENST00000526510 ANKRD26Q9UPS8 1709 aa26.96■■□□□ 1.91
PPP1CA-204ENST00000526510 NLRP13Q86W25 1043 aa26.95■■□□□ 1.91
PPP1CA-204ENST00000526510 CDC42BPGQ6DT37 1551 aa26.95■■□□□ 1.91
PPP1CA-204ENST00000526510 FMN2Q9NZ56 1722 aa26.95■■□□□ 1.9
PPP1CA-204ENST00000526510 TERF2IPQ9NYB0 399 aa26.95■■□□□ 1.9
PPP1CA-204ENST00000526510 STRCP1A6NGW2 1772 aa26.95■■□□□ 1.9
PPP1CA-204ENST00000526510 CPSF1Q10570 1443 aaKnown RBP26.92■■□□□ 1.9
PPP1CA-204ENST00000526510 PPP2R1AP30153 589 aa26.92■■□□□ 1.9
PPP1CA-204ENST00000526510 CCDC61Q9Y6R9 512 aa26.92■■□□□ 1.9
PPP1CA-204ENST00000526510 CGNL1Q0VF96 1302 aa26.91■■□□□ 1.9
PPP1CA-204ENST00000526510 CENPBP07199 599 aaPredicted RBP26.91■■□□□ 1.9
PPP1CA-204ENST00000526510 FAM9BQ8IZU0 186 aa26.91■■□□□ 1.9
PPP1CA-204ENST00000526510 HDGFL2Q7Z4V5 671 aaPredicted RBP26.9■■□□□ 1.9
PPP1CA-204ENST00000526510 PNISRQ8TF01 805 aaKnown RBP26.89■■□□□ 1.9
PPP1CA-204ENST00000526510 NKTRP30414 1462 aaKnown RBP26.87■■□□□ 1.89
PPP1CA-204ENST00000526510 NSD2O96028 1365 aa26.87■■□□□ 1.89
PPP1CA-204ENST00000526510 NUTM2FA1L443 756 aa26.87■■□□□ 1.89
PPP1CA-204ENST00000526510 RBM33Q96EV2 1170 aaKnown RBP26.86■■□□□ 1.89
PPP1CA-204ENST00000526510 NRKQ7Z2Y5 1582 aa26.85■■□□□ 1.89
PPP1CA-204ENST00000526510 ADGRL3Q9HAR2 1447 aa26.84■■□□□ 1.89
PPP1CA-204ENST00000526510 MORC1Q86VD1 984 aa26.83■■□□□ 1.89
PPP1CA-204ENST00000526510 PLEKHG3A1L390 1219 aa26.82■■□□□ 1.88
PPP1CA-204ENST00000526510 ANKARQ7Z5J8 1434 aa26.82■■□□□ 1.88
PPP1CA-204ENST00000526510 FYB1O15117 783 aa26.82■■□□□ 1.88
PPP1CA-204ENST00000526510 EDC4Q6P2E9 1401 aaKnown RBP26.81■■□□□ 1.88
PPP1CA-204ENST00000526510 GGNBP2Q9H3C7 697 aa26.79■■□□□ 1.88
PPP1CA-204ENST00000526510 ACEP12821 1306 aa26.78■■□□□ 1.88
PPP1CA-204ENST00000526510 HNRNPUQ00839 825 aaKnown RBP eCLIP26.76■■□□□ 1.87
PPP1CA-204ENST00000526510 TNNT2P45379 298 aaPredicted RBP26.76■■□□□ 1.87
PPP1CA-204ENST00000526510 PROSER2Q86WR7 435 aaPredicted RBP26.76■■□□□ 1.87
PPP1CA-204ENST00000526510 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.76■■□□□ 1.87
PPP1CA-204ENST00000526510 ZNF692Q9BU19 519 aaPredicted RBP26.76■■□□□ 1.87
PPP1CA-204ENST00000526510 XIRP1Q702N8 1843 aaKnown RBP26.75■■□□□ 1.87
PPP1CA-204ENST00000526510 POLR3AO14802 1390 aaPredicted RBP26.74■■□□□ 1.87
PPP1CA-204ENST00000526510 USP6P35125 1406 aa26.73■■□□□ 1.87
PPP1CA-204ENST00000526510 SHPRHQ149N8 1683 aa26.72■■□□□ 1.87
PPP1CA-204ENST00000526510 PMFBP1Q8TBY8 1022 aa26.72■■□□□ 1.87
PPP1CA-204ENST00000526510 MAP2P11137 1827 aaKnown RBP26.71■■□□□ 1.87
PPP1CA-204ENST00000526510 SSH2Q76I76 1423 aa26.7■■□□□ 1.87
PPP1CA-204ENST00000526510 NME9Q86XW9 330 aa26.7■■□□□ 1.86
PPP1CA-204ENST00000526510 C14orf37Q86TY3 774 aa26.69■■□□□ 1.86
PPP1CA-204ENST00000526510 ZRANB1Q9UGI0 708 aa26.67■■□□□ 1.86
PPP1CA-204ENST00000526510 TTC21BQ7Z4L5 1316 aa26.67■■□□□ 1.86
PPP1CA-204ENST00000526510 TMEM94Q12767 1356 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms