RNA–Protein interactions for RNA: ENST00000526481.6

CTSB-211, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-211ENST00000526481 TRAK1Q9UPV9 953 aa20.54■□□□□ 0.88
CTSB-211ENST00000526481 PTCH1Q13635 1447 aa20.53■□□□□ 0.88
CTSB-211ENST00000526481 ABCC11Q96J66 1382 aa20.53■□□□□ 0.88
CTSB-211ENST00000526481 ROBO2Q9HCK4 1378 aa20.53■□□□□ 0.88
CTSB-211ENST00000526481 XIRP1Q702N8 1843 aaKnown RBP20.53■□□□□ 0.88
CTSB-211ENST00000526481 PLEKHH1Q9ULM0 1364 aa20.52■□□□□ 0.88
CTSB-211ENST00000526481 HSPA5P11021 654 aaKnown RBP20.52■□□□□ 0.88
CTSB-211ENST00000526481 NALCNQ8IZF0 1738 aa20.52■□□□□ 0.88
CTSB-211ENST00000526481 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.52■□□□□ 0.88
CTSB-211ENST00000526481 NKTRP30414 1462 aaKnown RBP20.5■□□□□ 0.87
CTSB-211ENST00000526481 EIF3AQ14152 1382 aaKnown RBP20.5■□□□□ 0.87
CTSB-211ENST00000526481 HIRIP3Q9BW71 556 aaPredicted RBP20.5■□□□□ 0.87
CTSB-211ENST00000526481 AMOTL2Q9Y2J4 779 aa20.5■□□□□ 0.87
CTSB-211ENST00000526481 KCNA6P17658 529 aa20.49■□□□□ 0.87
CTSB-211ENST00000526481 EIF4G2P78344 907 aaKnown RBP eCLIP20.48■□□□□ 0.87
CTSB-211ENST00000526481 FAM135BQ49AJ0 1406 aa20.47■□□□□ 0.87
CTSB-211ENST00000526481 ZNF335Q9H4Z2 1342 aaPredicted RBP20.47■□□□□ 0.87
CTSB-211ENST00000526481 ADGRB2O60241 1585 aa20.46■□□□□ 0.87
CTSB-211ENST00000526481 ST20-MTHFSA0A0A6YYL1 179 aa20.46■□□□□ 0.87
CTSB-211ENST00000526481 TULP4Q9NRJ4 1543 aa20.46■□□□□ 0.87
CTSB-211ENST00000526481 PRAM1Q96QH2 718 aa20.45■□□□□ 0.86
CTSB-211ENST00000526481 CENPJQ9HC77 1338 aaPredicted RBP20.45■□□□□ 0.86
CTSB-211ENST00000526481 SAFB2Q14151 953 aaKnown RBP eCLIP20.44■□□□□ 0.86
CTSB-211ENST00000526481 WAPLQ7Z5K2 1190 aa20.44■□□□□ 0.86
CTSB-211ENST00000526481 LTBP4Q8N2S1 1624 aa20.43■□□□□ 0.86
CTSB-211ENST00000526481 TESK2Q96S53 571 aa20.41■□□□□ 0.86
CTSB-211ENST00000526481 SBNO2Q9Y2G9 1366 aa20.41■□□□□ 0.86
CTSB-211ENST00000526481 LRRC7Q96NW7 1537 aa20.41■□□□□ 0.86
CTSB-211ENST00000526481 POGKQ9P215 609 aa20.4■□□□□ 0.86
CTSB-211ENST00000526481 DISP3Q9P2K9 1392 aa20.4■□□□□ 0.86
CTSB-211ENST00000526481 FMN2Q9NZ56 1722 aa20.39■□□□□ 0.86
CTSB-211ENST00000526481 MINK1Q8N4C8 1332 aaPredicted RBP20.39■□□□□ 0.85
CTSB-211ENST00000526481 RBM33Q96EV2 1170 aaKnown RBP20.39■□□□□ 0.85
CTSB-211ENST00000526481 MYOM1P52179 1685 aa20.38■□□□□ 0.85
CTSB-211ENST00000526481 CDC42BPGQ6DT37 1551 aa20.38■□□□□ 0.85
CTSB-211ENST00000526481 SIRT1Q96EB6 747 aa20.38■□□□□ 0.85
CTSB-211ENST00000526481 ADGRL3Q9HAR2 1447 aa20.37■□□□□ 0.85
CTSB-211ENST00000526481 RGPD8O14715 1765 aaPredicted RBP20.36■□□□□ 0.85
CTSB-211ENST00000526481 TMEM94Q12767 1356 aa20.36■□□□□ 0.85
CTSB-211ENST00000526481 USP32Q8NFA0 1604 aa20.36■□□□□ 0.85
CTSB-211ENST00000526481 TOPAZ1Q8N9V7 1692 aa20.35■□□□□ 0.85
CTSB-211ENST00000526481 C11orf95C9JLR9 678 aaPredicted RBP20.34■□□□□ 0.85
CTSB-211ENST00000526481 PROSER2Q86WR7 435 aaPredicted RBP20.34■□□□□ 0.85
CTSB-211ENST00000526481 ZNF219Q9P2Y4 722 aaPredicted RBP20.34■□□□□ 0.85
CTSB-211ENST00000526481 DSG3P32926 999 aa20.31■□□□□ 0.84
CTSB-211ENST00000526481 ITSN1Q15811 1721 aa20.3■□□□□ 0.84
CTSB-211ENST00000526481 ZNF316A6NFI3 1004 aaPredicted RBP20.29■□□□□ 0.84
CTSB-211ENST00000526481 ATF5Q9Y2D1 282 aaPredicted RBP20.29■□□□□ 0.84
CTSB-211ENST00000526481 CCDC7Q96M83 1385 aa20.29■□□□□ 0.84
CTSB-211ENST00000526481 ATP7BP35670 1465 aa20.29■□□□□ 0.84
CTSB-211ENST00000526481 KIF7Q2M1P5 1343 aa20.28■□□□□ 0.84
CTSB-211ENST00000526481 WASHC2AQ641Q2 1341 aa20.27■□□□□ 0.84
CTSB-211ENST00000526481 NCOA3Q9Y6Q9 1424 aa20.27■□□□□ 0.84
CTSB-211ENST00000526481 TMF1P82094 1093 aa20.27■□□□□ 0.84
CTSB-211ENST00000526481 EVC2Q86UK5 1308 aa20.27■□□□□ 0.83
CTSB-211ENST00000526481 C14orf37Q86TY3 774 aa20.26■□□□□ 0.83
CTSB-211ENST00000526481 WASLO00401 505 aaPredicted RBP20.25■□□□□ 0.83
CTSB-211ENST00000526481 CABP2Q9NPB3 220 aa20.25■□□□□ 0.83
CTSB-211ENST00000526481 DCCP43146 1447 aa20.25■□□□□ 0.83
CTSB-211ENST00000526481 POLR3GLQ9BT43 218 aa20.24■□□□□ 0.83
CTSB-211ENST00000526481 CDK19Q9BWU1 502 aa20.24■□□□□ 0.83
CTSB-211ENST00000526481 PRR36Q9H6K5 1346 aa20.24■□□□□ 0.83
CTSB-211ENST00000526481 MSH6P52701 1360 aa20.22■□□□□ 0.83
CTSB-211ENST00000526481 AKAP12Q02952 1782 aa20.22■□□□□ 0.83
CTSB-211ENST00000526481 MST1RQ04912 1400 aa20.21■□□□□ 0.83
CTSB-211ENST00000526481 NUTM2FA1L443 756 aa20.21■□□□□ 0.83
CTSB-211ENST00000526481 SRPK2P78362 688 aaKnown RBP20.21■□□□□ 0.83
CTSB-211ENST00000526481 ANKARQ7Z5J8 1434 aa20.2■□□□□ 0.82
CTSB-211ENST00000526481 ATXN8OSP0DMR3 200 aa20.2■□□□□ 0.82
CTSB-211ENST00000526481 ATAD2Q6PL18 1390 aa20.19■□□□□ 0.82
CTSB-211ENST00000526481 MON2Q7Z3U7 1717 aa20.19■□□□□ 0.82
CTSB-211ENST00000526481 C19orf44Q9H6X5 657 aa20.18■□□□□ 0.82
CTSB-211ENST00000526481 KIF1AQ12756 1690 aa20.17■□□□□ 0.82
CTSB-211ENST00000526481 PPIP5K1Q6PFW1 1433 aa20.17■□□□□ 0.82
CTSB-211ENST00000526481 C1orf167Q5SNV9 1468 aa20.17■□□□□ 0.82
CTSB-211ENST00000526481 SLC24A1O60721 1099 aa20.16■□□□□ 0.82
CTSB-211ENST00000526481 CDCA8Q53HL2 280 aa20.16■□□□□ 0.82
CTSB-211ENST00000526481 NUDT16Q96DE0 195 aaKnown RBP20.16■□□□□ 0.82
CTSB-211ENST00000526481 CD163L1Q9NR16 1453 aa20.16■□□□□ 0.82
CTSB-211ENST00000526481 NRKQ7Z2Y5 1582 aa20.14■□□□□ 0.81
CTSB-211ENST00000526481 IQSEC2Q5JU85 1478 aa20.14■□□□□ 0.81
CTSB-211ENST00000526481 ABCB7O75027 752 aa20.14■□□□□ 0.81
CTSB-211ENST00000526481 PUS7Q96PZ0 661 aaKnown RBP20.14■□□□□ 0.81
CTSB-211ENST00000526481 ATF3P18847 181 aa20.13■□□□□ 0.81
CTSB-211ENST00000526481 ROBO1Q9Y6N7 1651 aa20.11■□□□□ 0.81
CTSB-211ENST00000526481 CADPS2Q86UW7 1296 aa20.11■□□□□ 0.81
CTSB-211ENST00000526481 TMC1Q8TDI8 760 aa20.11■□□□□ 0.81
CTSB-211ENST00000526481 SLC12A5Q9H2X9 1139 aa20.11■□□□□ 0.81
CTSB-211ENST00000526481 NINLQ9Y2I6 1382 aa20.1■□□□□ 0.81
CTSB-211ENST00000526481 A0A1W2PP64 1363 aa20.09■□□□□ 0.81
CTSB-211ENST00000526481 NHSL1Q5SYE7 1610 aa20.09■□□□□ 0.81
CTSB-211ENST00000526481 KIF20BQ96Q89 1820 aa20.09■□□□□ 0.81
CTSB-211ENST00000526481 DDX10Q13206 875 aaKnown RBP20.08■□□□□ 0.81
CTSB-211ENST00000526481 CABP1Q9NZU7 370 aa20.08■□□□□ 0.81
CTSB-211ENST00000526481 CCDC61Q9Y6R9 512 aa20.08■□□□□ 0.81
CTSB-211ENST00000526481 ANKRD36BQ8N2N9 1353 aa20.08■□□□□ 0.8
CTSB-211ENST00000526481 TRPM3Q9HCF6 1732 aaPredicted RBP20.07■□□□□ 0.8
CTSB-211ENST00000526481 CERKQ8TCT0 537 aa20.07■□□□□ 0.8
CTSB-211ENST00000526481 ORAI2Q96SN7 254 aa20.07■□□□□ 0.8
CTSB-211ENST00000526481 CPSF1Q10570 1443 aaKnown RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms