RNA–Protein interactions for RNA: ENST00000526457.3

LRRK1-205, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 11,632 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-205ENST00000526457 SPATA24Q86W54 205 aa9.23□□□□□ -0.93
LRRK1-205ENST00000526457 GOLGA6L10A0A0M3HER8 536 aa9.23□□□□□ -0.93
LRRK1-205ENST00000526457 ANO2Q9NQ90 1003 aa9.23□□□□□ -0.93
LRRK1-205ENST00000526457 SUPT6HQ7KZ85 1726 aaKnown RBP9.23□□□□□ -0.93
LRRK1-205ENST00000526457 PRDM2Q13029 1718 aa9.23□□□□□ -0.93
LRRK1-205ENST00000526457 EPS15P42566 896 aa9.23□□□□□ -0.93
LRRK1-205ENST00000526457 C22orf23Q9BZE7 217 aa9.23□□□□□ -0.93
LRRK1-205ENST00000526457 CCDC88BA6NC98 1476 aa9.23□□□□□ -0.93
LRRK1-205ENST00000526457 CARMIL1Q5VZK9 1371 aa9.23□□□□□ -0.93
LRRK1-205ENST00000526457 SMARCE1Q969G3 411 aa9.23□□□□□ -0.93
LRRK1-205ENST00000526457 MNAT1P51948 309 aa9.23□□□□□ -0.93
LRRK1-205ENST00000526457 RABEP1Q15276 862 aa9.23□□□□□ -0.93
LRRK1-205ENST00000526457 ERICH3Q5RHP9 1530 aa9.22□□□□□ -0.93
LRRK1-205ENST00000526457 PLIN1O60240 522 aa9.22□□□□□ -0.93
LRRK1-205ENST00000526457 CPLX2Q6PUV4 134 aaKnown RBP9.22□□□□□ -0.93
LRRK1-205ENST00000526457 SLC4A10Q6U841 1118 aa9.22□□□□□ -0.93
LRRK1-205ENST00000526457 NLRP13Q86W25 1043 aa9.22□□□□□ -0.93
LRRK1-205ENST00000526457 SSR1P43307 286 aaKnown RBP9.22□□□□□ -0.93
LRRK1-205ENST00000526457 MPNDQ8N594 471 aa9.22□□□□□ -0.93
LRRK1-205ENST00000526457 ANKRD62A6NC57 917 aa9.22□□□□□ -0.93
LRRK1-205ENST00000526457 PLCD3Q8N3E9 789 aa9.22□□□□□ -0.93
LRRK1-205ENST00000526457 KCNH8Q96L42 1107 aa9.22□□□□□ -0.93
LRRK1-205ENST00000526457 CUX2O14529 1486 aa9.22□□□□□ -0.93
LRRK1-205ENST00000526457 LMOD2Q6P5Q4 547 aa9.22□□□□□ -0.93
LRRK1-205ENST00000526457 FOSBP53539 338 aa9.22□□□□□ -0.93
LRRK1-205ENST00000526457 LMOD3Q0VAK6 560 aa9.22□□□□□ -0.93
LRRK1-205ENST00000526457 PAXIP1Q6ZW49 1069 aaPredicted RBP9.21□□□□□ -0.93
LRRK1-205ENST00000526457 DHX57Q6P158 1386 aaKnown RBP9.21□□□□□ -0.93
LRRK1-205ENST00000526457 SDF4Q9BRK5 362 aa9.21□□□□□ -0.93
LRRK1-205ENST00000526457 CPLX1O14810 134 aa9.21□□□□□ -0.93
LRRK1-205ENST00000526457 TMCO3Q6UWJ1 677 aa9.21□□□□□ -0.93
LRRK1-205ENST00000526457 UACAQ9BZF9 1416 aa9.21□□□□□ -0.93
LRRK1-205ENST00000526457 DHX8Q14562 1220 aaKnown RBP9.21□□□□□ -0.94
LRRK1-205ENST00000526457 TRIM34Q9BYJ4 488 aa9.21□□□□□ -0.94
LRRK1-205ENST00000526457 ZKSCAN1P17029 563 aaPredicted RBP9.21□□□□□ -0.94
LRRK1-205ENST00000526457 ANKRD18AQ8IVF6 992 aa9.21□□□□□ -0.94
LRRK1-205ENST00000526457 RUFY2Q8WXA3 655 aa9.21□□□□□ -0.94
LRRK1-205ENST00000526457 GTF2F1P35269 517 aaKnown RBP eCLIP9.21□□□□□ -0.94
LRRK1-205ENST00000526457 ZFYVE27Q5T4F4 411 aa9.21□□□□□ -0.94
LRRK1-205ENST00000526457 IQCEQ6IPM2 695 aa9.21□□□□□ -0.94
LRRK1-205ENST00000526457 MROH2BQ7Z745 1585 aa9.21□□□□□ -0.94
LRRK1-205ENST00000526457 SYNE3Q6ZMZ3 975 aa9.21□□□□□ -0.94
LRRK1-205ENST00000526457 RNF187Q5TA31 235 aaPredicted RBP9.2□□□□□ -0.94
LRRK1-205ENST00000526457 CEP63Q96MT8 703 aa9.2□□□□□ -0.94
LRRK1-205ENST00000526457 CARMIL2Q6F5E8 1435 aa9.2□□□□□ -0.94
LRRK1-205ENST00000526457 KINO60870 393 aaKnown RBP9.2□□□□□ -0.94
LRRK1-205ENST00000526457 ANKRD30AQ9BXX3 1397 aa9.2□□□□□ -0.94
LRRK1-205ENST00000526457 POLR3GO15318 223 aaPredicted RBP9.2□□□□□ -0.94
LRRK1-205ENST00000526457 TDO2P48775 406 aa9.2□□□□□ -0.94
LRRK1-205ENST00000526457 ZSCAN30Q86W11 494 aa9.2□□□□□ -0.94
LRRK1-205ENST00000526457 SPAG9O60271 1321 aaKnown RBP9.19□□□□□ -0.94
LRRK1-205ENST00000526457 PAK3O75914 559 aaPredicted RBP9.19□□□□□ -0.94
LRRK1-205ENST00000526457 GBP2P32456 591 aaPredicted RBP9.19□□□□□ -0.94
LRRK1-205ENST00000526457 HDGFP51858 240 aaKnown RBP9.19□□□□□ -0.94
LRRK1-205ENST00000526457 ZFP91Q96JP5 570 aaPredicted RBP9.19□□□□□ -0.94
LRRK1-205ENST00000526457 EIF4G1Q04637 1599 aaKnown RBP9.19□□□□□ -0.94
LRRK1-205ENST00000526457 DNAAF4Q8WXU2 420 aa9.19□□□□□ -0.94
LRRK1-205ENST00000526457 MICALCLQ6ZW33 695 aa9.19□□□□□ -0.94
LRRK1-205ENST00000526457 TCEAL9Q9UHQ7 104 aa9.19□□□□□ -0.94
LRRK1-205ENST00000526457 CFAP45Q9UL16 551 aa9.19□□□□□ -0.94
LRRK1-205ENST00000526457 SOX12O15370 315 aa9.19□□□□□ -0.94
LRRK1-205ENST00000526457 PPP4R3BQ5MIZ7 849 aa9.19□□□□□ -0.94
LRRK1-205ENST00000526457 UBXN4Q92575 508 aa9.19□□□□□ -0.94
LRRK1-205ENST00000526457 LUZP1Q86V48 1076 aa9.18□□□□□ -0.94
LRRK1-205ENST00000526457 KIF7Q2M1P5 1343 aa9.18□□□□□ -0.94
LRRK1-205ENST00000526457 FAM177A1Q8N128 213 aaPredicted RBP9.18□□□□□ -0.94
LRRK1-205ENST00000526457 DCAF11Q8TEB1 546 aa9.18□□□□□ -0.94
LRRK1-205ENST00000526457 CRACR2AQ9BSW2 395 aa9.18□□□□□ -0.94
LRRK1-205ENST00000526457 LRRFIP2Q9Y608 721 aaKnown RBP9.18□□□□□ -0.94
LRRK1-205ENST00000526457 FILIP1LQ4L180 1135 aa9.18□□□□□ -0.94
LRRK1-205ENST00000526457 CCDC181Q5TID7 509 aa9.18□□□□□ -0.94
LRRK1-205ENST00000526457 CPSF2Q9P2I0 782 aaKnown RBP9.17□□□□□ -0.94
LRRK1-205ENST00000526457 FMNL2Q96PY5 1086 aa9.17□□□□□ -0.94
LRRK1-205ENST00000526457 CCDC192P0DO97 292 aa9.17□□□□□ -0.94
LRRK1-205ENST00000526457 SRPK2P78362 688 aaKnown RBP9.17□□□□□ -0.94
LRRK1-205ENST00000526457 RAPGEF2Q9Y4G8 1499 aa9.17□□□□□ -0.94
LRRK1-205ENST00000526457 TMCO5BA8MYB1 307 aa9.17□□□□□ -0.94
LRRK1-205ENST00000526457 KIAA1328Q86T90 577 aa9.17□□□□□ -0.94
LRRK1-205ENST00000526457 ZNHIT6Q9NWK9 470 aaKnown RBP9.17□□□□□ -0.94
LRRK1-205ENST00000526457 PRPF40AO75400 957 aaKnown RBP9.17□□□□□ -0.94
LRRK1-205ENST00000526457 MAP9Q49MG5 647 aa9.17□□□□□ -0.94
LRRK1-205ENST00000526457 NOL10Q9BSC4 688 aaKnown RBP9.17□□□□□ -0.94
LRRK1-205ENST00000526457 SOGA1O94964 1423 aa9.16□□□□□ -0.94
LRRK1-205ENST00000526457 SEPT6Q14141 434 aa9.16□□□□□ -0.94
LRRK1-205ENST00000526457 SAFBQ15424 915 aaKnown RBP eCLIP9.16□□□□□ -0.94
LRRK1-205ENST00000526457 MAP2K1Q02750 393 aaPredicted RBP9.16□□□□□ -0.94
LRRK1-205ENST00000526457 PPFIBP1Q86W92 1011 aa9.16□□□□□ -0.94
LRRK1-205ENST00000526457 WDR66Q8TBY9 1149 aa9.16□□□□□ -0.94
LRRK1-205ENST00000526457 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.16□□□□□ -0.94
LRRK1-205ENST00000526457 INTS3Q68E01 1043 aaKnown RBP9.16□□□□□ -0.94
LRRK1-205ENST00000526457 KIF2AO00139 706 aaPredicted RBP9.15□□□□□ -0.94
LRRK1-205ENST00000526457 SETSIPP0DME0 302 aa9.15□□□□□ -0.94
LRRK1-205ENST00000526457 BRPF1P55201 1214 aaPredicted RBP9.15□□□□□ -0.94
LRRK1-205ENST00000526457 CCDC27Q2M243 656 aa9.15□□□□□ -0.94
LRRK1-205ENST00000526457 CCDC91Q7Z6B0 441 aa9.15□□□□□ -0.94
LRRK1-205ENST00000526457 GBP3Q9H0R5 595 aa9.15□□□□□ -0.94
LRRK1-205ENST00000526457 MAGEC2Q9UBF1 373 aaPredicted RBP9.15□□□□□ -0.94
LRRK1-205ENST00000526457 ZNF330Q9Y3S2 320 aaPredicted RBP9.15□□□□□ -0.94
LRRK1-205ENST00000526457 SCAPERQ9BY12 1400 aa9.15□□□□□ -0.94
LRRK1-205ENST00000526457 DYNC1I1O14576 645 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms