RNA–Protein interactions for RNA: ENST00000526388.1

LINC00958-202, long intergenic non-protein coding RNA 958, humanhuman

TSL 2 BASIC

Gene LINC00958, Length 607 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-202ENST00000526388 FXR2P51116 673 aaKnown RBP eCLIP11.81□□□□□ -0.52
LINC00958-202ENST00000526388 SHPRHQ149N8 1683 aa11.81□□□□□ -0.52
LINC00958-202ENST00000526388 SLAIN2Q9P270 581 aa11.8□□□□□ -0.52
LINC00958-202ENST00000526388 IFT172Q9UG01 1749 aa11.8□□□□□ -0.52
LINC00958-202ENST00000526388 NHSL1Q5SYE7 1610 aa11.79□□□□□ -0.52
LINC00958-202ENST00000526388 DCCP43146 1447 aa11.79□□□□□ -0.52
LINC00958-202ENST00000526388 PIP4P2Q8N4L2 257 aa11.79□□□□□ -0.52
LINC00958-202ENST00000526388 TRIM52Q96A61 297 aa11.79□□□□□ -0.52
LINC00958-202ENST00000526388 FBXO3Q9UK99 471 aa11.79□□□□□ -0.52
LINC00958-202ENST00000526388 ASXL1Q8IXJ9 1541 aa11.78□□□□□ -0.52
LINC00958-202ENST00000526388 AMOTL2Q9Y2J4 779 aa11.78□□□□□ -0.52
LINC00958-202ENST00000526388 METP08581 1390 aa11.78□□□□□ -0.52
LINC00958-202ENST00000526388 ATF3P18847 181 aa11.77□□□□□ -0.53
LINC00958-202ENST00000526388 CADPS2Q86UW7 1296 aa11.77□□□□□ -0.53
LINC00958-202ENST00000526388 JCADQ9P266 1359 aa11.77□□□□□ -0.53
LINC00958-202ENST00000526388 ADGRL3Q9HAR2 1447 aa11.77□□□□□ -0.53
LINC00958-202ENST00000526388 C19orf44Q9H6X5 657 aa11.76□□□□□ -0.53
LINC00958-202ENST00000526388 PTCH1Q13635 1447 aa11.75□□□□□ -0.53
LINC00958-202ENST00000526388 LRP6O75581 1613 aa11.75□□□□□ -0.53
LINC00958-202ENST00000526388 RGS17Q9UGC6 210 aaPredicted RBP11.74□□□□□ -0.53
LINC00958-202ENST00000526388 MST1RQ04912 1400 aa11.74□□□□□ -0.53
LINC00958-202ENST00000526388 CCDC144AA2RUR9 1427 aa11.73□□□□□ -0.53
LINC00958-202ENST00000526388 KNDC1Q76NI1 1749 aa11.72□□□□□ -0.53
LINC00958-202ENST00000526388 PRAG1Q86YV5 1406 aa11.72□□□□□ -0.53
LINC00958-202ENST00000526388 PRKAR2AP13861 404 aaKnown RBP11.72□□□□□ -0.53
LINC00958-202ENST00000526388 BRINP3Q76B58 766 aa11.71□□□□□ -0.53
LINC00958-202ENST00000526388 LAMC1P11047 1609 aa11.71□□□□□ -0.54
LINC00958-202ENST00000526388 VGFO15240 615 aaPredicted RBP11.7□□□□□ -0.54
LINC00958-202ENST00000526388 CDC42BPGQ6DT37 1551 aa11.7□□□□□ -0.54
LINC00958-202ENST00000526388 SPATA31E1Q6ZUB1 1445 aa11.69□□□□□ -0.54
LINC00958-202ENST00000526388 ROBO2Q9HCK4 1378 aa11.69□□□□□ -0.54
LINC00958-202ENST00000526388 SPATA31A6Q5VVP1 1343 aa11.69□□□□□ -0.54
LINC00958-202ENST00000526388 RPGRIP1LQ68CZ1 1315 aa11.69□□□□□ -0.54
LINC00958-202ENST00000526388 POTEAQ6S8J7 498 aa11.68□□□□□ -0.54
LINC00958-202ENST00000526388 SETD5Q9C0A6 1442 aa11.68□□□□□ -0.54
LINC00958-202ENST00000526388 PLEKHG5O94827 1062 aa11.67□□□□□ -0.54
LINC00958-202ENST00000526388 MEX3CQ5U5Q3 659 aaKnown RBP11.67□□□□□ -0.54
LINC00958-202ENST00000526388 C1orf167Q5SNV9 1468 aa11.67□□□□□ -0.54
LINC00958-202ENST00000526388 PIK3C2GO75747 1445 aa11.66□□□□□ -0.54
LINC00958-202ENST00000526388 CHADLQ6NUI6 762 aa11.65□□□□□ -0.54
LINC00958-202ENST00000526388 MPHOSPH9Q99550 1183 aa11.65□□□□□ -0.54
LINC00958-202ENST00000526388 FMN2Q9NZ56 1722 aa11.65□□□□□ -0.54
LINC00958-202ENST00000526388 ANKRD30BQ9BXX2 1392 aa11.65□□□□□ -0.55
LINC00958-202ENST00000526388 TECPR2O15040 1411 aa11.64□□□□□ -0.55
LINC00958-202ENST00000526388 MIER1Q8N108 512 aa11.64□□□□□ -0.55
LINC00958-202ENST00000526388 CREBZFQ9NS37 354 aa11.64□□□□□ -0.55
LINC00958-202ENST00000526388 ADGRF5Q8IZF2 1346 aa11.63□□□□□ -0.55
LINC00958-202ENST00000526388 RGL3Q3MIN7 710 aa11.63□□□□□ -0.55
LINC00958-202ENST00000526388 PNPLA6Q8IY17 1366 aa11.63□□□□□ -0.55
LINC00958-202ENST00000526388 COL22A1Q8NFW1 1626 aaPredicted RBP11.63□□□□□ -0.55
LINC00958-202ENST00000526388 MYOM2P54296 1465 aa11.63□□□□□ -0.55
LINC00958-202ENST00000526388 KIF1AQ12756 1690 aa11.62□□□□□ -0.55
LINC00958-202ENST00000526388 NUTM2BA6NNL0 878 aaPredicted RBP11.62□□□□□ -0.55
LINC00958-202ENST00000526388 NUTM2EB1AL46 878 aaPredicted RBP11.62□□□□□ -0.55
LINC00958-202ENST00000526388 NUTM2AQ8IVF1 878 aaPredicted RBP11.62□□□□□ -0.55
LINC00958-202ENST00000526388 DDX17Q92841 729 aaKnown RBP11.62□□□□□ -0.55
LINC00958-202ENST00000526388 MARF1Q9Y4F3 1742 aaKnown RBP11.62□□□□□ -0.55
LINC00958-202ENST00000526388 RAB3GAP2Q9H2M9 1393 aa11.62□□□□□ -0.55
LINC00958-202ENST00000526388 ZNF772Q68DY9 489 aaPredicted RBP11.61□□□□□ -0.55
LINC00958-202ENST00000526388 PLCD3Q8N3E9 789 aa11.61□□□□□ -0.55
LINC00958-202ENST00000526388 NRXN1Q9ULB1 1477 aa11.61□□□□□ -0.55
LINC00958-202ENST00000526388 RGPD8O14715 1765 aaPredicted RBP11.61□□□□□ -0.55
LINC00958-202ENST00000526388 ACIN1Q9UKV3 1341 aaKnown RBP11.6□□□□□ -0.55
LINC00958-202ENST00000526388 LRPPRCP42704 1394 aaKnown RBP11.6□□□□□ -0.55
LINC00958-202ENST00000526388 LRRC59Q96AG4 307 aaKnown RBP11.6□□□□□ -0.55
LINC00958-202ENST00000526388 YTHDC2Q9H6S0 1430 aaKnown RBP11.6□□□□□ -0.55
LINC00958-202ENST00000526388 ORAI2Q96SN7 254 aa11.59□□□□□ -0.55
LINC00958-202ENST00000526388 STK26Q9P289 416 aa11.59□□□□□ -0.55
LINC00958-202ENST00000526388 PXDNQ92626 1479 aa11.58□□□□□ -0.56
LINC00958-202ENST00000526388 AFF2P51816 1311 aa11.58□□□□□ -0.56
LINC00958-202ENST00000526388 CDK12Q9NYV4 1490 aaPredicted RBP11.57□□□□□ -0.56
LINC00958-202ENST00000526388 ABCC11Q96J66 1382 aa11.57□□□□□ -0.56
LINC00958-202ENST00000526388 PLEKHH1Q9ULM0 1364 aa11.57□□□□□ -0.56
LINC00958-202ENST00000526388 FARP1Q9Y4F1 1045 aaPredicted RBP11.57□□□□□ -0.56
LINC00958-202ENST00000526388 SOS2Q07890 1332 aaPredicted RBP11.57□□□□□ -0.56
LINC00958-202ENST00000526388 VASPP50552 380 aaPredicted RBP11.56□□□□□ -0.56
LINC00958-202ENST00000526388 TMEM132EQ6IEE7 984 aa11.56□□□□□ -0.56
LINC00958-202ENST00000526388 C8orf37Q96NL8 207 aa11.56□□□□□ -0.56
LINC00958-202ENST00000526388 NPHP3Q7Z494 1330 aa11.56□□□□□ -0.56
LINC00958-202ENST00000526388 ABCA3Q99758 1704 aa11.55□□□□□ -0.56
LINC00958-202ENST00000526388 ADGRB2O60241 1585 aa11.55□□□□□ -0.56
LINC00958-202ENST00000526388 ESCO1Q5FWF5 840 aa11.55□□□□□ -0.56
LINC00958-202ENST00000526388 WAPLQ7Z5K2 1190 aa11.55□□□□□ -0.56
LINC00958-202ENST00000526388 DLC1Q96QB1 1528 aa11.55□□□□□ -0.56
LINC00958-202ENST00000526388 ADGRB1O14514 1584 aa11.54□□□□□ -0.56
LINC00958-202ENST00000526388 RGS12O14924 1447 aa11.54□□□□□ -0.56
LINC00958-202ENST00000526388 ADAMTS2O95450 1211 aa11.54□□□□□ -0.56
LINC00958-202ENST00000526388 ZBTB47Q9UFB7 747 aaPredicted RBP11.54□□□□□ -0.56
LINC00958-202ENST00000526388 USP32Q8NFA0 1604 aa11.53□□□□□ -0.56
LINC00958-202ENST00000526388 ARHGEF28Q8N1W1 1705 aaKnown RBP11.53□□□□□ -0.56
LINC00958-202ENST00000526388 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.53□□□□□ -0.56
LINC00958-202ENST00000526388 NUTM2FA1L443 756 aa11.53□□□□□ -0.56
LINC00958-202ENST00000526388 RXRBP28702 533 aa11.53□□□□□ -0.56
LINC00958-202ENST00000526388 C14orf93Q9H972 538 aaKnown RBP11.52□□□□□ -0.57
LINC00958-202ENST00000526388 DHX57Q6P158 1386 aaKnown RBP11.52□□□□□ -0.57
LINC00958-202ENST00000526388 XPCQ01831 940 aaPredicted RBP11.51□□□□□ -0.57
LINC00958-202ENST00000526388 CFAP70Q5T0N1 1121 aa11.51□□□□□ -0.57
LINC00958-202ENST00000526388 NGLY1Q96IV0 654 aa11.51□□□□□ -0.57
LINC00958-202ENST00000526388 PLCH1Q4KWH8 1693 aa11.51□□□□□ -0.57
LINC00958-202ENST00000526388 EP400Q96L91 3159 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms