RNA–Protein interactions for RNA: ENST00000525913.1

SSH3-204, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2

Gene SSH3, Length 264 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-204ENST00000525913 RALGAPBQ86X10 1494 aa11□□□□□ -0.65
SSH3-204ENST00000525913 PSDA5PKW4 1024 aaPredicted RBP10.99□□□□□ -0.65
SSH3-204ENST00000525913 ONECUT3O60422 494 aaPredicted RBP10.99□□□□□ -0.65
SSH3-204ENST00000525913 UNC5CLQ8IV45 518 aa10.99□□□□□ -0.65
SSH3-204ENST00000525913 SLIT2O94813 1529 aa10.99□□□□□ -0.65
SSH3-204ENST00000525913 SEPT12Q8IYM1 358 aa10.97□□□□□ -0.65
SSH3-204ENST00000525913 ROBO2Q9HCK4 1378 aa10.97□□□□□ -0.65
SSH3-204ENST00000525913 PXDNQ92626 1479 aa10.97□□□□□ -0.65
SSH3-204ENST00000525913 LOC105371045A0A1W2PR82 267 aa10.95□□□□□ -0.66
SSH3-204ENST00000525913 SF3B2Q13435 895 aaKnown RBP10.95□□□□□ -0.66
SSH3-204ENST00000525913 NEXMIFQ5QGS0 1516 aa10.94□□□□□ -0.66
SSH3-204ENST00000525913 NPHP3Q7Z494 1330 aa10.94□□□□□ -0.66
SSH3-204ENST00000525913 FOXO3O43524 673 aa10.94□□□□□ -0.66
SSH3-204ENST00000525913 XPCQ01831 940 aaPredicted RBP10.94□□□□□ -0.66
SSH3-204ENST00000525913 ZNF326Q5BKZ1 582 aaKnown RBP10.94□□□□□ -0.66
SSH3-204ENST00000525913 ESCO1Q5FWF5 840 aa10.93□□□□□ -0.66
SSH3-204ENST00000525913 KRT27Q7Z3Y8 459 aa10.93□□□□□ -0.66
SSH3-204ENST00000525913 PRAG1Q86YV5 1406 aa10.92□□□□□ -0.66
SSH3-204ENST00000525913 VPS72Q15906 364 aa10.92□□□□□ -0.66
SSH3-204ENST00000525913 NUP155O75694 1391 aa10.91□□□□□ -0.66
SSH3-204ENST00000525913 YY1P25490 414 aa10.91□□□□□ -0.66
SSH3-204ENST00000525913 BAG6P46379 1132 aa10.91□□□□□ -0.66
SSH3-204ENST00000525913 EN1Q05925 392 aaPredicted RBP10.91□□□□□ -0.66
SSH3-204ENST00000525913 FAM50AQ14320 339 aaKnown RBP10.91□□□□□ -0.66
SSH3-204ENST00000525913 SPATA31A3Q5VYP0 1347 aa10.9□□□□□ -0.66
SSH3-204ENST00000525913 R3HDM1Q15032 1099 aaKnown RBP10.9□□□□□ -0.66
SSH3-204ENST00000525913 HFM1A2PYH4 1435 aa10.9□□□□□ -0.66
SSH3-204ENST00000525913 USP32Q8NFA0 1604 aa10.89□□□□□ -0.67
SSH3-204ENST00000525913 NWD2Q9ULI1 1742 aa10.89□□□□□ -0.67
SSH3-204ENST00000525913 CLTCL1P53675 1640 aa10.88□□□□□ -0.67
SSH3-204ENST00000525913 KIF1BO60333 1816 aa10.88□□□□□ -0.67
SSH3-204ENST00000525913 CDC42BPGQ6DT37 1551 aa10.87□□□□□ -0.67
SSH3-204ENST00000525913 APLP2Q06481 763 aa10.87□□□□□ -0.67
SSH3-204ENST00000525913 PLCH1Q4KWH8 1693 aa10.87□□□□□ -0.67
SSH3-204ENST00000525913 LRPPRCP42704 1394 aaKnown RBP10.87□□□□□ -0.67
SSH3-204ENST00000525913 ROCK1Q13464 1354 aa10.87□□□□□ -0.67
SSH3-204ENST00000525913 RGPD1P0DJD0 1748 aa10.87□□□□□ -0.67
SSH3-204ENST00000525913 NUTM2FA1L443 756 aa10.86□□□□□ -0.67
SSH3-204ENST00000525913 FAM83GA6ND36 823 aa10.86□□□□□ -0.67
SSH3-204ENST00000525913 VGFO15240 615 aaPredicted RBP10.86□□□□□ -0.67
SSH3-204ENST00000525913 EZH2Q15910 746 aaKnown RBP10.86□□□□□ -0.67
SSH3-204ENST00000525913 KRT28Q7Z3Y7 464 aa10.86□□□□□ -0.67
SSH3-204ENST00000525913 CABLES1Q8TDN4 633 aa10.86□□□□□ -0.67
SSH3-204ENST00000525913 RGPD8O14715 1765 aaPredicted RBP10.85□□□□□ -0.67
SSH3-204ENST00000525913 DISP2A7MBM2 1401 aa10.85□□□□□ -0.67
SSH3-204ENST00000525913 TNS1Q9HBL0 1735 aaKnown RBP10.85□□□□□ -0.67
SSH3-204ENST00000525913 FAM182BQ5T319 152 aa10.85□□□□□ -0.67
SSH3-204ENST00000525913 CAMKK2Q96RR4 588 aa10.85□□□□□ -0.67
SSH3-204ENST00000525913 WAPLQ7Z5K2 1190 aa10.84□□□□□ -0.67
SSH3-204ENST00000525913 CCDC9Q9Y3X0 531 aaKnown RBP10.84□□□□□ -0.67
SSH3-204ENST00000525913 NRAPQ86VF7 1730 aa10.84□□□□□ -0.67
SSH3-204ENST00000525913 NAIPQ13075 1403 aa10.84□□□□□ -0.67
SSH3-204ENST00000525913 FAM98CQ17RN3 349 aaKnown RBP10.83□□□□□ -0.68
SSH3-204ENST00000525913 ABCA3Q99758 1704 aa10.83□□□□□ -0.68
SSH3-204ENST00000525913 PPLO60437 1756 aa10.82□□□□□ -0.68
SSH3-204ENST00000525913 FMN2Q9NZ56 1722 aa10.81□□□□□ -0.68
SSH3-204ENST00000525913 CCDC144AA2RUR9 1427 aa10.81□□□□□ -0.68
SSH3-204ENST00000525913 RPGRIP1LQ68CZ1 1315 aa10.81□□□□□ -0.68
SSH3-204ENST00000525913 PLEKHH1Q9ULM0 1364 aa10.8□□□□□ -0.68
SSH3-204ENST00000525913 KIF1AQ12756 1690 aa10.8□□□□□ -0.68
SSH3-204ENST00000525913 TNS3Q68CZ2 1445 aa10.8□□□□□ -0.68
SSH3-204ENST00000525913 TECPR2O15040 1411 aa10.79□□□□□ -0.68
SSH3-204ENST00000525913 BTG4Q9NY30 223 aa10.79□□□□□ -0.68
SSH3-204ENST00000525913 THSD7AQ9UPZ6 1657 aa10.79□□□□□ -0.68
SSH3-204ENST00000525913 SBNO1A3KN83 1393 aa10.78□□□□□ -0.68
SSH3-204ENST00000525913 A0A0G2JS52 829 aa10.78□□□□□ -0.68
SSH3-204ENST00000525913 PLEKHG5O94827 1062 aa10.78□□□□□ -0.68
SSH3-204ENST00000525913 HAP1P54257 671 aaPredicted RBP10.78□□□□□ -0.68
SSH3-204ENST00000525913 MYT1Q01538 1121 aa10.78□□□□□ -0.68
SSH3-204ENST00000525913 PSME1Q06323 249 aa10.78□□□□□ -0.68
SSH3-204ENST00000525913 IFFO2Q5TF58 517 aa10.78□□□□□ -0.68
SSH3-204ENST00000525913 PHF8Q9UPP1 1060 aa10.78□□□□□ -0.68
SSH3-204ENST00000525913 SPATA31A5Q5VU36 1347 aa10.78□□□□□ -0.68
SSH3-204ENST00000525913 SPATA31A7Q8IWB4 1347 aa10.78□□□□□ -0.68
SSH3-204ENST00000525913 ABCC11Q96J66 1382 aa10.77□□□□□ -0.68
SSH3-204ENST00000525913 RREB1Q92766 1687 aa10.77□□□□□ -0.69
SSH3-204ENST00000525913 CAMTA1Q9Y6Y1 1673 aa10.77□□□□□ -0.69
SSH3-204ENST00000525913 TRIM37O94972 964 aa10.77□□□□□ -0.69
SSH3-204ENST00000525913 STK26Q9P289 416 aa10.77□□□□□ -0.69
SSH3-204ENST00000525913 UTRNP46939 3433 aa10.77□□□□□ -0.69
SSH3-204ENST00000525913 NUP188Q5SRE5 1749 aa10.76□□□□□ -0.69
SSH3-204ENST00000525913 ADGRF5Q8IZF2 1346 aa10.76□□□□□ -0.69
SSH3-204ENST00000525913 KNDC1Q76NI1 1749 aa10.75□□□□□ -0.69
SSH3-204ENST00000525913 NRXN1Q9ULB1 1477 aa10.75□□□□□ -0.69
SSH3-204ENST00000525913 COL14A1Q05707 1796 aaKnown RBP10.75□□□□□ -0.69
SSH3-204ENST00000525913 APBA3O96018 575 aa10.75□□□□□ -0.69
SSH3-204ENST00000525913 TMEM132EQ6IEE7 984 aa10.75□□□□□ -0.69
SSH3-204ENST00000525913 FAM196AQ6ZSG2 479 aa10.75□□□□□ -0.69
SSH3-204ENST00000525913 ZNF784Q8NCA9 323 aaPredicted RBP10.75□□□□□ -0.69
SSH3-204ENST00000525913 PARD3Q8TEW0 1356 aa10.75□□□□□ -0.69
SSH3-204ENST00000525913 KCNQ2O43526 872 aa10.74□□□□□ -0.69
SSH3-204ENST00000525913 LMOD2Q6P5Q4 547 aa10.74□□□□□ -0.69
SSH3-204ENST00000525913 SIRT1Q96EB6 747 aa10.74□□□□□ -0.69
SSH3-204ENST00000525913 IFT172Q9UG01 1749 aa10.74□□□□□ -0.69
SSH3-204ENST00000525913 ARHGEF10O15013 1369 aa10.74□□□□□ -0.69
SSH3-204ENST00000525913 TRPM3Q9HCF6 1732 aaPredicted RBP10.73□□□□□ -0.69
SSH3-204ENST00000525913 ITGAEP38570 1179 aa10.73□□□□□ -0.69
SSH3-204ENST00000525913 SPON1Q9HCB6 807 aa10.73□□□□□ -0.69
SSH3-204ENST00000525913 NINLQ9Y2I6 1382 aa10.73□□□□□ -0.69
SSH3-204ENST00000525913 ALS2Q96Q42 1657 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms