RNA–Protein interactions for RNA: ENST00000525642.1

PKP3-203, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 495 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-203ENST00000525642 TIMELESSQ9UNS1 1208 aa24.77■■□□□ 1.56
PKP3-203ENST00000525642 MST1RQ04912 1400 aa24.77■■□□□ 1.56
PKP3-203ENST00000525642 ARHGEF28Q8N1W1 1705 aaKnown RBP24.76■■□□□ 1.55
PKP3-203ENST00000525642 TRAK1Q9UPV9 953 aa24.74■■□□□ 1.55
PKP3-203ENST00000525642 GPRASP1Q5JY77 1395 aa24.74■■□□□ 1.55
PKP3-203ENST00000525642 ROBO1Q9Y6N7 1651 aa24.74■■□□□ 1.55
PKP3-203ENST00000525642 PRAM1Q96QH2 718 aa24.73■■□□□ 1.55
PKP3-203ENST00000525642 ADGRB2O60241 1585 aa24.71■■□□□ 1.55
PKP3-203ENST00000525642 CCER1Q8TC90 406 aaPredicted RBP24.7■■□□□ 1.54
PKP3-203ENST00000525642 SCAF1Q9H7N4 1312 aaKnown RBP24.69■■□□□ 1.54
PKP3-203ENST00000525642 C1orf167Q5SNV9 1468 aa24.69■■□□□ 1.54
PKP3-203ENST00000525642 RALGAPBQ86X10 1494 aa24.69■■□□□ 1.54
PKP3-203ENST00000525642 FMN2Q9NZ56 1722 aa24.67■■□□□ 1.54
PKP3-203ENST00000525642 HSPA1LP34931 641 aa24.67■■□□□ 1.54
PKP3-203ENST00000525642 POGKQ9P215 609 aa24.67■■□□□ 1.54
PKP3-203ENST00000525642 BRINP3Q76B58 766 aa24.66■■□□□ 1.54
PKP3-203ENST00000525642 ROCK2O75116 1388 aaKnown RBP24.65■■□□□ 1.54
PKP3-203ENST00000525642 AHDC1Q5TGY3 1603 aaPredicted RBP24.64■■□□□ 1.53
PKP3-203ENST00000525642 SAFB2Q14151 953 aaKnown RBP eCLIP24.62■■□□□ 1.53
PKP3-203ENST00000525642 NHSL1Q5SYE7 1610 aa24.61■■□□□ 1.53
PKP3-203ENST00000525642 ORAI2Q96SN7 254 aa24.58■■□□□ 1.53
PKP3-203ENST00000525642 CENPJQ9HC77 1338 aaPredicted RBP24.58■■□□□ 1.52
PKP3-203ENST00000525642 COL16A1Q07092 1604 aaPredicted RBP24.57■■□□□ 1.52
PKP3-203ENST00000525642 USP32Q8NFA0 1604 aa24.57■■□□□ 1.52
PKP3-203ENST00000525642 ANKARQ7Z5J8 1434 aa24.57■■□□□ 1.52
PKP3-203ENST00000525642 PHLPP1O60346 1717 aa24.57■■□□□ 1.52
PKP3-203ENST00000525642 MINK1Q8N4C8 1332 aaPredicted RBP24.57■■□□□ 1.52
PKP3-203ENST00000525642 WASLO00401 505 aaPredicted RBP24.56■■□□□ 1.52
PKP3-203ENST00000525642 RGPD8O14715 1765 aaPredicted RBP24.54■■□□□ 1.52
PKP3-203ENST00000525642 QRICH2Q9H0J4 1663 aa24.54■■□□□ 1.52
PKP3-203ENST00000525642 HIRIP3Q9BW71 556 aaPredicted RBP24.54■■□□□ 1.52
PKP3-203ENST00000525642 CARD11Q9BXL7 1154 aa24.54■■□□□ 1.52
PKP3-203ENST00000525642 TULP4Q9NRJ4 1543 aa24.54■■□□□ 1.52
PKP3-203ENST00000525642 EIF3AQ14152 1382 aaKnown RBP24.53■■□□□ 1.52
PKP3-203ENST00000525642 PRR36Q9H6K5 1346 aa24.51■■□□□ 1.51
PKP3-203ENST00000525642 SBNO2Q9Y2G9 1366 aa24.51■■□□□ 1.51
PKP3-203ENST00000525642 KIF1AQ12756 1690 aa24.5■■□□□ 1.51
PKP3-203ENST00000525642 ESCO1Q5FWF5 840 aa24.5■■□□□ 1.51
PKP3-203ENST00000525642 NUTM2FA1L443 756 aa24.49■■□□□ 1.51
PKP3-203ENST00000525642 SOS2Q07890 1332 aaPredicted RBP24.49■■□□□ 1.51
PKP3-203ENST00000525642 ATP7BP35670 1465 aa24.49■■□□□ 1.51
PKP3-203ENST00000525642 CDK19Q9BWU1 502 aa24.48■■□□□ 1.51
PKP3-203ENST00000525642 DDX17Q92841 729 aaKnown RBP24.46■■□□□ 1.51
PKP3-203ENST00000525642 PXDNQ92626 1479 aa24.45■■□□□ 1.51
PKP3-203ENST00000525642 JCADQ9P266 1359 aa24.44■■□□□ 1.5
PKP3-203ENST00000525642 TOPAZ1Q8N9V7 1692 aa24.44■■□□□ 1.5
PKP3-203ENST00000525642 NPHP3Q7Z494 1330 aa24.44■■□□□ 1.5
PKP3-203ENST00000525642 PHF8Q9UPP1 1060 aa24.44■■□□□ 1.5
PKP3-203ENST00000525642 SHPRHQ149N8 1683 aa24.43■■□□□ 1.5
PKP3-203ENST00000525642 NUDT16Q96DE0 195 aaKnown RBP24.43■■□□□ 1.5
PKP3-203ENST00000525642 ITSN1Q15811 1721 aa24.43■■□□□ 1.5
PKP3-203ENST00000525642 LRRC59Q96AG4 307 aaKnown RBP24.42■■□□□ 1.5
PKP3-203ENST00000525642 FOXO3O43524 673 aa24.41■■□□□ 1.5
PKP3-203ENST00000525642 EVC2Q86UK5 1308 aa24.39■■□□□ 1.5
PKP3-203ENST00000525642 TESK2Q96S53 571 aa24.39■■□□□ 1.49
PKP3-203ENST00000525642 CCDC61Q9Y6R9 512 aa24.39■■□□□ 1.49
PKP3-203ENST00000525642 PLEKHG3A1L390 1219 aa24.38■■□□□ 1.49
PKP3-203ENST00000525642 ST20-MTHFSA0A0A6YYL1 179 aa24.37■■□□□ 1.49
PKP3-203ENST00000525642 USP47Q96K76 1375 aa24.37■■□□□ 1.49
PKP3-203ENST00000525642 POLR3AO14802 1390 aaPredicted RBP24.36■■□□□ 1.49
PKP3-203ENST00000525642 PNPLA6Q8IY17 1366 aa24.36■■□□□ 1.49
PKP3-203ENST00000525642 PMFBP1Q8TBY8 1022 aa24.35■■□□□ 1.49
PKP3-203ENST00000525642 CABP2Q9NPB3 220 aa24.35■■□□□ 1.49
PKP3-203ENST00000525642 SPATA31A6Q5VVP1 1343 aa24.35■■□□□ 1.49
PKP3-203ENST00000525642 MED1Q15648 1581 aaPredicted RBP24.34■■□□□ 1.49
PKP3-203ENST00000525642 SRPK2P78362 688 aaKnown RBP24.34■■□□□ 1.49
PKP3-203ENST00000525642 KRT28Q7Z3Y7 464 aa24.34■■□□□ 1.49
PKP3-203ENST00000525642 PUS7Q96PZ0 661 aaKnown RBP24.34■■□□□ 1.49
PKP3-203ENST00000525642 COL22A1Q8NFW1 1626 aaPredicted RBP24.34■■□□□ 1.49
PKP3-203ENST00000525642 TRPM3Q9HCF6 1732 aaPredicted RBP24.33■■□□□ 1.49
PKP3-203ENST00000525642 SBNO1A3KN83 1393 aa24.33■■□□□ 1.49
PKP3-203ENST00000525642 SLC24A1O60721 1099 aa24.33■■□□□ 1.49
PKP3-203ENST00000525642 SPATA31A3Q5VYP0 1347 aa24.32■■□□□ 1.48
PKP3-203ENST00000525642 PPIP5K1Q6PFW1 1433 aa24.3■■□□□ 1.48
PKP3-203ENST00000525642 XPCQ01831 940 aaPredicted RBP24.3■■□□□ 1.48
PKP3-203ENST00000525642 PSME1Q06323 249 aa24.3■■□□□ 1.48
PKP3-203ENST00000525642 ATAD2Q6PL18 1390 aa24.29■■□□□ 1.48
PKP3-203ENST00000525642 ACEP12821 1306 aa24.28■■□□□ 1.48
PKP3-203ENST00000525642 LRP6O75581 1613 aa24.28■■□□□ 1.48
PKP3-203ENST00000525642 TNS3Q68CZ2 1445 aa24.27■■□□□ 1.48
PKP3-203ENST00000525642 NGDNQ8NEJ9 315 aaKnown RBP24.27■■□□□ 1.48
PKP3-203ENST00000525642 ALS2Q96Q42 1657 aa24.27■■□□□ 1.48
PKP3-203ENST00000525642 CABP1Q9NZU7 370 aa24.26■■□□□ 1.47
PKP3-203ENST00000525642 BRD4O60885 1362 aaPredicted RBP24.24■■□□□ 1.47
PKP3-203ENST00000525642 CPSF1Q10570 1443 aaKnown RBP24.23■■□□□ 1.47
PKP3-203ENST00000525642 DISP3Q9P2K9 1392 aa24.22■■□□□ 1.47
PKP3-203ENST00000525642 AKAP12Q02952 1782 aa24.21■■□□□ 1.47
PKP3-203ENST00000525642 SSH2Q76I76 1423 aa24.21■■□□□ 1.47
PKP3-203ENST00000525642 ARHGEF10O15013 1369 aa24.21■■□□□ 1.47
PKP3-203ENST00000525642 EIF4G2P78344 907 aaKnown RBP eCLIP24.21■■□□□ 1.47
PKP3-203ENST00000525642 CD163L1Q9NR16 1453 aa24.19■■□□□ 1.46
PKP3-203ENST00000525642 TMF1P82094 1093 aa24.19■■□□□ 1.46
PKP3-203ENST00000525642 USP6P35125 1406 aa24.18■■□□□ 1.46
PKP3-203ENST00000525642 ZNF692Q9BU19 519 aaPredicted RBP24.18■■□□□ 1.46
PKP3-203ENST00000525642 HSPA5P11021 654 aaKnown RBP24.17■■□□□ 1.46
PKP3-203ENST00000525642 NINLQ9Y2I6 1382 aa24.16■■□□□ 1.46
PKP3-203ENST00000525642 CRYBG1Q9Y4K1 1723 aa24.16■■□□□ 1.46
PKP3-203ENST00000525642 ABCA3Q99758 1704 aa24.15■■□□□ 1.46
PKP3-203ENST00000525642 RGS17Q9UGC6 210 aaPredicted RBP24.15■■□□□ 1.46
PKP3-203ENST00000525642 MON2Q7Z3U7 1717 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms