RNA–Protein interactions for RNA: ENST00000525355.5

NCAM1-204, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 4

Gene NCAM1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-204ENST00000525355 UPF1Q92900 1129 aaKnown RBP eCLIP12.4□□□□□ -0.42
NCAM1-204ENST00000525355 LAMC1P11047 1609 aa12.4□□□□□ -0.42
NCAM1-204ENST00000525355 CDK12Q9NYV4 1490 aaPredicted RBP12.4□□□□□ -0.43
NCAM1-204ENST00000525355 ACIN1Q9UKV3 1341 aaKnown RBP12.39□□□□□ -0.43
NCAM1-204ENST00000525355 SPATA31E1Q6ZUB1 1445 aa12.39□□□□□ -0.43
NCAM1-204ENST00000525355 RBM6P78332 1123 aaKnown RBP12.39□□□□□ -0.43
NCAM1-204ENST00000525355 WAPLQ7Z5K2 1190 aa12.38□□□□□ -0.43
NCAM1-204ENST00000525355 NPHP3Q7Z494 1330 aa12.37□□□□□ -0.43
NCAM1-204ENST00000525355 TMEM132EQ6IEE7 984 aa12.37□□□□□ -0.43
NCAM1-204ENST00000525355 LRPPRCP42704 1394 aaKnown RBP12.37□□□□□ -0.43
NCAM1-204ENST00000525355 CDC42BPGQ6DT37 1551 aa12.37□□□□□ -0.43
NCAM1-204ENST00000525355 IFT172Q9UG01 1749 aa12.37□□□□□ -0.43
NCAM1-204ENST00000525355 TECPR2O15040 1411 aa12.37□□□□□ -0.43
NCAM1-204ENST00000525355 ABCC11Q96J66 1382 aa12.36□□□□□ -0.43
NCAM1-204ENST00000525355 FOXO3O43524 673 aa12.36□□□□□ -0.43
NCAM1-204ENST00000525355 USP21Q9UK80 565 aa12.36□□□□□ -0.43
NCAM1-204ENST00000525355 NUTM2FA1L443 756 aa12.35□□□□□ -0.43
NCAM1-204ENST00000525355 XPCQ01831 940 aaPredicted RBP12.35□□□□□ -0.43
NCAM1-204ENST00000525355 PIK3C2GO75747 1445 aa12.35□□□□□ -0.43
NCAM1-204ENST00000525355 TRPC5Q9UL62 973 aaPredicted RBP12.34□□□□□ -0.43
NCAM1-204ENST00000525355 RGS12O14924 1447 aa12.34□□□□□ -0.43
NCAM1-204ENST00000525355 YTHDC2Q9H6S0 1430 aaKnown RBP12.34□□□□□ -0.43
NCAM1-204ENST00000525355 PLEKHH1Q9ULM0 1364 aa12.33□□□□□ -0.44
NCAM1-204ENST00000525355 FNBP4Q8N3X1 1017 aaPredicted RBP12.33□□□□□ -0.44
NCAM1-204ENST00000525355 C14orf93Q9H972 538 aaKnown RBP12.33□□□□□ -0.44
NCAM1-204ENST00000525355 KNDC1Q76NI1 1749 aa12.33□□□□□ -0.44
NCAM1-204ENST00000525355 PXDNQ92626 1479 aa12.33□□□□□ -0.44
NCAM1-204ENST00000525355 COL22A1Q8NFW1 1626 aaPredicted RBP12.33□□□□□ -0.44
NCAM1-204ENST00000525355 SIRT1Q96EB6 747 aa12.32□□□□□ -0.44
NCAM1-204ENST00000525355 DHX57Q6P158 1386 aaKnown RBP12.3□□□□□ -0.44
NCAM1-204ENST00000525355 MYOM2P54296 1465 aa12.3□□□□□ -0.44
NCAM1-204ENST00000525355 CFAP70Q5T0N1 1121 aa12.3□□□□□ -0.44
NCAM1-204ENST00000525355 FMN2Q9NZ56 1722 aa12.3□□□□□ -0.44
NCAM1-204ENST00000525355 ATAD2Q6PL18 1390 aa12.29□□□□□ -0.44
NCAM1-204ENST00000525355 RAB3GAP2Q9H2M9 1393 aa12.29□□□□□ -0.44
NCAM1-204ENST00000525355 KIF1AQ12756 1690 aa12.29□□□□□ -0.44
NCAM1-204ENST00000525355 ATRNO75882 1429 aa12.28□□□□□ -0.44
NCAM1-204ENST00000525355 MARF1Q9Y4F3 1742 aaKnown RBP12.28□□□□□ -0.44
NCAM1-204ENST00000525355 NRXN1Q9ULB1 1477 aa12.28□□□□□ -0.44
NCAM1-204ENST00000525355 SAFB2Q14151 953 aaKnown RBP eCLIP12.28□□□□□ -0.44
NCAM1-204ENST00000525355 KRT28Q7Z3Y7 464 aa12.28□□□□□ -0.44
NCAM1-204ENST00000525355 SPATA31A3Q5VYP0 1347 aa12.28□□□□□ -0.44
NCAM1-204ENST00000525355 PSME1Q06323 249 aa12.27□□□□□ -0.45
NCAM1-204ENST00000525355 PRAM1Q96QH2 718 aa12.27□□□□□ -0.45
NCAM1-204ENST00000525355 POGKQ9P215 609 aa12.27□□□□□ -0.45
NCAM1-204ENST00000525355 PHF8Q9UPP1 1060 aa12.27□□□□□ -0.45
NCAM1-204ENST00000525355 RGPD8O14715 1765 aaPredicted RBP12.27□□□□□ -0.45
NCAM1-204ENST00000525355 BCL9LQ86UU0 1499 aa12.27□□□□□ -0.45
NCAM1-204ENST00000525355 HAP1P54257 671 aaPredicted RBP12.26□□□□□ -0.45
NCAM1-204ENST00000525355 GJD4Q96KN9 370 aaPredicted RBP12.25□□□□□ -0.45
NCAM1-204ENST00000525355 LMOD2Q6P5Q4 547 aa12.24□□□□□ -0.45
NCAM1-204ENST00000525355 UNC5CLQ8IV45 518 aa12.24□□□□□ -0.45
NCAM1-204ENST00000525355 KDM2AQ9Y2K7 1162 aa12.24□□□□□ -0.45
NCAM1-204ENST00000525355 DLC1Q96QB1 1528 aa12.23□□□□□ -0.45
NCAM1-204ENST00000525355 TNS3Q68CZ2 1445 aa12.23□□□□□ -0.45
NCAM1-204ENST00000525355 PLEKHG5O94827 1062 aa12.23□□□□□ -0.45
NCAM1-204ENST00000525355 DCAF11Q8TEB1 546 aa12.23□□□□□ -0.45
NCAM1-204ENST00000525355 PMFBP1Q8TBY8 1022 aa12.22□□□□□ -0.45
NCAM1-204ENST00000525355 CABLES1Q8TDN4 633 aa12.22□□□□□ -0.45
NCAM1-204ENST00000525355 TRAK1Q9UPV9 953 aa12.22□□□□□ -0.45
NCAM1-204ENST00000525355 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.22□□□□□ -0.45
NCAM1-204ENST00000525355 USP32Q8NFA0 1604 aa12.22□□□□□ -0.45
NCAM1-204ENST00000525355 SLIT2O94813 1529 aa12.21□□□□□ -0.45
NCAM1-204ENST00000525355 SBNO1A3KN83 1393 aa12.21□□□□□ -0.45
NCAM1-204ENST00000525355 ARHGEF10O15013 1369 aa12.21□□□□□ -0.45
NCAM1-204ENST00000525355 CCDC125Q86Z20 511 aa12.21□□□□□ -0.45
NCAM1-204ENST00000525355 STAC3Q96MF2 364 aa12.21□□□□□ -0.45
NCAM1-204ENST00000525355 HIRIP3Q9BW71 556 aaPredicted RBP12.21□□□□□ -0.45
NCAM1-204ENST00000525355 ANKARQ7Z5J8 1434 aa12.2□□□□□ -0.46
NCAM1-204ENST00000525355 MINK1Q8N4C8 1332 aaPredicted RBP12.2□□□□□ -0.46
NCAM1-204ENST00000525355 ADGRB1O14514 1584 aa12.2□□□□□ -0.46
NCAM1-204ENST00000525355 RALGAPBQ86X10 1494 aa12.2□□□□□ -0.46
NCAM1-204ENST00000525355 EIF3AQ14152 1382 aaKnown RBP12.19□□□□□ -0.46
NCAM1-204ENST00000525355 HRCP23327 699 aa12.19□□□□□ -0.46
NCAM1-204ENST00000525355 GPRASP1Q5JY77 1395 aa12.18□□□□□ -0.46
NCAM1-204ENST00000525355 ADGRB2O60241 1585 aa12.18□□□□□ -0.46
NCAM1-204ENST00000525355 VPS72Q15906 364 aa12.18□□□□□ -0.46
NCAM1-204ENST00000525355 ZRANB1Q9UGI0 708 aa12.18□□□□□ -0.46
NCAM1-204ENST00000525355 CCDC9Q9Y3X0 531 aaKnown RBP12.18□□□□□ -0.46
NCAM1-204ENST00000525355 WASLO00401 505 aaPredicted RBP12.17□□□□□ -0.46
NCAM1-204ENST00000525355 GLI3P10071 1580 aa12.17□□□□□ -0.46
NCAM1-204ENST00000525355 FAM83GA6ND36 823 aa12.16□□□□□ -0.46
NCAM1-204ENST00000525355 SEPT12Q8IYM1 358 aa12.16□□□□□ -0.46
NCAM1-204ENST00000525355 NGDNQ8NEJ9 315 aaKnown RBP12.16□□□□□ -0.46
NCAM1-204ENST00000525355 NWD2Q9ULI1 1742 aa12.16□□□□□ -0.46
NCAM1-204ENST00000525355 PLCH1Q4KWH8 1693 aa12.16□□□□□ -0.46
NCAM1-204ENST00000525355 PRR36Q9H6K5 1346 aa12.15□□□□□ -0.46
NCAM1-204ENST00000525355 ABCA3Q99758 1704 aa12.15□□□□□ -0.46
NCAM1-204ENST00000525355 BRWD3Q6RI45 1802 aa12.15□□□□□ -0.46
NCAM1-204ENST00000525355 TULP4Q9NRJ4 1543 aa12.15□□□□□ -0.46
NCAM1-204ENST00000525355 PAK3O75914 559 aaPredicted RBP12.14□□□□□ -0.47
NCAM1-204ENST00000525355 SF3B2Q13435 895 aaKnown RBP12.14□□□□□ -0.47
NCAM1-204ENST00000525355 TRPM3Q9HCF6 1732 aaPredicted RBP12.14□□□□□ -0.47
NCAM1-204ENST00000525355 BLMP54132 1417 aaPredicted RBP12.13□□□□□ -0.47
NCAM1-204ENST00000525355 A0A0G2JS52 829 aa12.13□□□□□ -0.47
NCAM1-204ENST00000525355 ONECUT3O60422 494 aaPredicted RBP12.13□□□□□ -0.47
NCAM1-204ENST00000525355 MYT1Q01538 1121 aa12.13□□□□□ -0.47
NCAM1-204ENST00000525355 BTG4Q9NY30 223 aa12.13□□□□□ -0.47
NCAM1-204ENST00000525355 EP400Q96L91 3159 aa12.13□□□□□ -0.47
NCAM1-204ENST00000525355 KRT27Q7Z3Y8 459 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms