RNA–Protein interactions for RNA: ENST00000525231.5

VAV3-208, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

TSL 4

Gene VAV3, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-208ENST00000525231 SMCPP49901 116 aaPredicted RBP6.38□□□□□ -1.39
VAV3-208ENST00000525231 PCDHB3Q9Y5E6 796 aa6.38□□□□□ -1.39
VAV3-208ENST00000525231 FHAD1B1AJZ9 1412 aa6.38□□□□□ -1.39
VAV3-208ENST00000525231 TSR1Q2NL82 804 aaKnown RBP6.37□□□□□ -1.39
VAV3-208ENST00000525231 RBM27Q9P2N5 1060 aaKnown RBP6.37□□□□□ -1.39
VAV3-208ENST00000525231 NBR1Q14596 966 aa6.36□□□□□ -1.39
VAV3-208ENST00000525231 HIRIP3Q9BW71 556 aaPredicted RBP6.36□□□□□ -1.39
VAV3-208ENST00000525231 RTN4Q9NQC3 1192 aaKnown RBP6.36□□□□□ -1.39
VAV3-208ENST00000525231 BIVM-ERCC5R4GMW8 1640 aa6.36□□□□□ -1.39
VAV3-208ENST00000525231 ARHGAP35Q9NRY4 1499 aa6.35□□□□□ -1.39
VAV3-208ENST00000525231 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.35□□□□□ -1.39
VAV3-208ENST00000525231 DDX12PQ92771 950 aa6.35□□□□□ -1.39
VAV3-208ENST00000525231 FAM198AQ9UFP1 575 aa6.35□□□□□ -1.39
VAV3-208ENST00000525231 DACH1Q9UI36 760 aa6.35□□□□□ -1.39
VAV3-208ENST00000525231 LRRC9Q6ZRR7 1453 aa6.34□□□□□ -1.39
VAV3-208ENST00000525231 CARMIL1Q5VZK9 1371 aa6.34□□□□□ -1.39
VAV3-208ENST00000525231 WDR97A6NE52 1622 aa6.34□□□□□ -1.39
VAV3-208ENST00000525231 MAPKBP1O60336 1514 aa6.34□□□□□ -1.39
VAV3-208ENST00000525231 EIF4G2P78344 907 aaKnown RBP eCLIP6.33□□□□□ -1.4
VAV3-208ENST00000525231 CAMK2BQ13554 666 aa6.33□□□□□ -1.4
VAV3-208ENST00000525231 RTL5Q5HYW3 569 aaPredicted RBP6.33□□□□□ -1.4
VAV3-208ENST00000525231 ZSCAN1Q8NBB4 408 aa6.33□□□□□ -1.4
VAV3-208ENST00000525231 SENP2Q9HC62 589 aa6.33□□□□□ -1.4
VAV3-208ENST00000525231 PKD2L1Q9P0L9 805 aa6.33□□□□□ -1.4
VAV3-208ENST00000525231 UNC13AQ9UPW8 1703 aa6.33□□□□□ -1.4
VAV3-208ENST00000525231 TIAM1Q13009 1591 aa6.32□□□□□ -1.4
VAV3-208ENST00000525231 DPYSL4O14531 572 aa6.32□□□□□ -1.4
VAV3-208ENST00000525231 S1PR4O95977 384 aa6.32□□□□□ -1.4
VAV3-208ENST00000525231 DEKP35659 375 aaKnown RBP6.32□□□□□ -1.4
VAV3-208ENST00000525231 ANP32AP39687 249 aaKnown RBP6.32□□□□□ -1.4
VAV3-208ENST00000525231 SWT1Q5T5J6 900 aaKnown RBP6.32□□□□□ -1.4
VAV3-208ENST00000525231 LCE2CQ5TA81 110 aa6.32□□□□□ -1.4
VAV3-208ENST00000525231 BLOC1S3Q6QNY0 202 aa6.32□□□□□ -1.4
VAV3-208ENST00000525231 NUDT18Q6ZVK8 323 aa6.32□□□□□ -1.4
VAV3-208ENST00000525231 P3H3Q8IVL6 736 aa6.32□□□□□ -1.4
VAV3-208ENST00000525231 IGF1RP08069 1367 aa6.31□□□□□ -1.4
VAV3-208ENST00000525231 PHLDB1Q86UU1 1377 aa6.31□□□□□ -1.4
VAV3-208ENST00000525231 BICRAQ9NZM4 1560 aa6.31□□□□□ -1.4
VAV3-208ENST00000525231 C3orf80F5H4A9 247 aa6.31□□□□□ -1.4
VAV3-208ENST00000525231 IRX6P78412 446 aaPredicted RBP6.31□□□□□ -1.4
VAV3-208ENST00000525231 AMER1Q5JTC6 1135 aaPredicted RBP6.31□□□□□ -1.4
VAV3-208ENST00000525231 CADPS2Q86UW7 1296 aa6.31□□□□□ -1.4
VAV3-208ENST00000525231 SLC16A10Q8TF71 515 aa6.31□□□□□ -1.4
VAV3-208ENST00000525231 TOR4AQ9NXH8 423 aa6.31□□□□□ -1.4
VAV3-208ENST00000525231 NOP58Q9Y2X3 529 aaKnown RBP6.31□□□□□ -1.4
VAV3-208ENST00000525231 TLL1O43897 1013 aa6.3□□□□□ -1.4
VAV3-208ENST00000525231 FOXC1Q12948 553 aa6.3□□□□□ -1.4
VAV3-208ENST00000525231 FAM9BQ8IZU0 186 aa6.3□□□□□ -1.4
VAV3-208ENST00000525231 CYP4X1Q8N118 509 aa6.3□□□□□ -1.4
VAV3-208ENST00000525231 TRIM47Q96LD4 638 aa6.3□□□□□ -1.4
VAV3-208ENST00000525231 PPEF1O14829 653 aaPredicted RBP6.29□□□□□ -1.4
VAV3-208ENST00000525231 ADH1BP00325 375 aa6.29□□□□□ -1.4
VAV3-208ENST00000525231 HSPA5P11021 654 aaKnown RBP6.29□□□□□ -1.4
VAV3-208ENST00000525231 KIFC2Q96AC6 838 aa6.29□□□□□ -1.4
VAV3-208ENST00000525231 MRS2Q9HD23 443 aa6.29□□□□□ -1.4
VAV3-208ENST00000525231 CUX1P39880 1505 aa6.29□□□□□ -1.4
VAV3-208ENST00000525231 NCAPD3P42695 1498 aa6.28□□□□□ -1.4
VAV3-208ENST00000525231 UACAQ9BZF9 1416 aa6.28□□□□□ -1.4
VAV3-208ENST00000525231 RPIAP49247 311 aa6.28□□□□□ -1.4
VAV3-208ENST00000525231 BBXQ8WY36 941 aaPredicted RBP6.28□□□□□ -1.4
VAV3-208ENST00000525231 CCDC136Q96JN2 1154 aa6.28□□□□□ -1.4
VAV3-208ENST00000525231 MTUS2Q5JR59 1369 aa6.28□□□□□ -1.4
VAV3-208ENST00000525231 PDIA6Q15084 440 aa6.27□□□□□ -1.41
VAV3-208ENST00000525231 B4GALNT3Q6L9W6 998 aa6.27□□□□□ -1.41
VAV3-208ENST00000525231 ATP13A2Q9NQ11 1180 aa6.27□□□□□ -1.41
VAV3-208ENST00000525231 CFTRP13569 1480 aa6.27□□□□□ -1.41
VAV3-208ENST00000525231 ZBED9Q6R2W3 1325 aa6.26□□□□□ -1.41
VAV3-208ENST00000525231 FMN1Q68DA7 1419 aa6.26□□□□□ -1.41
VAV3-208ENST00000525231 CASKIN1Q8WXD9 1431 aa6.26□□□□□ -1.41
VAV3-208ENST00000525231 SNRPBP14678 240 aaKnown RBP6.26□□□□□ -1.41
VAV3-208ENST00000525231 NPAS3Q8IXF0 933 aa6.26□□□□□ -1.41
VAV3-208ENST00000525231 SLC6A16Q9GZN6 736 aa6.26□□□□□ -1.41
VAV3-208ENST00000525231 CCDC18Q5T9S5 1454 aa6.26□□□□□ -1.41
VAV3-208ENST00000525231 SPDYE16A6NNV3 312 aaPredicted RBP6.25□□□□□ -1.41
VAV3-208ENST00000525231 KMT5BQ4FZB7 885 aa6.25□□□□□ -1.41
VAV3-208ENST00000525231 PLA2G2CQ5R387 149 aa6.25□□□□□ -1.41
VAV3-208ENST00000525231 IRF7Q92985 503 aa6.25□□□□□ -1.41
VAV3-208ENST00000525231 IPO9Q96P70 1041 aaKnown RBP6.25□□□□□ -1.41
VAV3-208ENST00000525231 PRKRIP1Q9H875 184 aaPredicted RBP6.25□□□□□ -1.41
VAV3-208ENST00000525231 AQRO60306 1485 aaKnown RBP eCLIP6.25□□□□□ -1.41
VAV3-208ENST00000525231 FYCO1Q9BQS8 1478 aa6.25□□□□□ -1.41
VAV3-208ENST00000525231 HMGXB3Q12766 1538 aa6.25□□□□□ -1.41
VAV3-208ENST00000525231 HFM1A2PYH4 1435 aa6.25□□□□□ -1.41
VAV3-208ENST00000525231 FGD6Q6ZV73 1430 aa6.25□□□□□ -1.41
VAV3-208ENST00000525231 FGD5Q6ZNL6 1462 aa6.24□□□□□ -1.41
VAV3-208ENST00000525231 NR1I2O75469 434 aa6.24□□□□□ -1.41
VAV3-208ENST00000525231 CD2BP2O95400 341 aaKnown RBP6.24□□□□□ -1.41
VAV3-208ENST00000525231 LORP23490 312 aaPredicted RBP6.24□□□□□ -1.41
VAV3-208ENST00000525231 CNTLNQ9NXG0 1405 aa6.24□□□□□ -1.41
VAV3-208ENST00000525231 WASHC2AQ641Q2 1341 aa6.24□□□□□ -1.41
VAV3-208ENST00000525231 ACTN4O43707 911 aaKnown RBP6.23□□□□□ -1.41
VAV3-208ENST00000525231 TTC13Q8NBP0 860 aa6.23□□□□□ -1.41
VAV3-208ENST00000525231 EFCAB5A4FU69 1503 aa6.23□□□□□ -1.41
VAV3-208ENST00000525231 CADPSQ9ULU8 1353 aa6.22□□□□□ -1.41
VAV3-208ENST00000525231 PPM1GO15355 546 aaPredicted RBP6.22□□□□□ -1.41
VAV3-208ENST00000525231 GMPRP36959 345 aa6.22□□□□□ -1.41
VAV3-208ENST00000525231 MPHOSPH9Q99550 1183 aa6.22□□□□□ -1.41
VAV3-208ENST00000525231 RRP7BPQ9NSQ0 103 aa6.22□□□□□ -1.41
VAV3-208ENST00000525231 USP35Q9P2H5 1018 aa6.22□□□□□ -1.41
VAV3-208ENST00000525231 NXF1Q9UBU9 619 aaKnown RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms