RNA–Protein interactions for RNA: ENST00000524784.1

PACS1-202, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-202ENST00000524784 KNDC1Q76NI1 1749 aa14.59□□□□□ -0.07
PACS1-202ENST00000524784 SRPK2P78362 688 aaKnown RBP14.59□□□□□ -0.07
PACS1-202ENST00000524784 CPS1P31327 1500 aa14.58□□□□□ -0.08
PACS1-202ENST00000524784 CDK19Q9BWU1 502 aa14.57□□□□□ -0.08
PACS1-202ENST00000524784 DMRT2Q9Y5R5 561 aa14.57□□□□□ -0.08
PACS1-202ENST00000524784 PTCH1Q13635 1447 aa14.57□□□□□ -0.08
PACS1-202ENST00000524784 ANP32CO43423 234 aa14.56□□□□□ -0.08
PACS1-202ENST00000524784 TMC1Q8TDI8 760 aa14.56□□□□□ -0.08
PACS1-202ENST00000524784 CABP2Q9NPB3 220 aa14.56□□□□□ -0.08
PACS1-202ENST00000524784 WASLO00401 505 aaPredicted RBP14.55□□□□□ -0.08
PACS1-202ENST00000524784 PANK3Q9H999 370 aa14.55□□□□□ -0.08
PACS1-202ENST00000524784 ATAD2Q6PL18 1390 aa14.54□□□□□ -0.08
PACS1-202ENST00000524784 XRN1Q8IZH2 1706 aaKnown RBP14.53□□□□□ -0.08
PACS1-202ENST00000524784 PROSER2Q86WR7 435 aaPredicted RBP14.53□□□□□ -0.08
PACS1-202ENST00000524784 CHD2O14647 1828 aaKnown RBP14.52□□□□□ -0.08
PACS1-202ENST00000524784 TULP4Q9NRJ4 1543 aa14.52□□□□□ -0.08
PACS1-202ENST00000524784 C14orf37Q86TY3 774 aa14.52□□□□□ -0.09
PACS1-202ENST00000524784 NINLQ9Y2I6 1382 aa14.51□□□□□ -0.09
PACS1-202ENST00000524784 AEBP2Q6ZN18 517 aaPredicted RBP14.51□□□□□ -0.09
PACS1-202ENST00000524784 MIER1Q8N108 512 aa14.51□□□□□ -0.09
PACS1-202ENST00000524784 SLC12A5Q9H2X9 1139 aa14.51□□□□□ -0.09
PACS1-202ENST00000524784 STRCQ7RTU9 1775 aa14.5□□□□□ -0.09
PACS1-202ENST00000524784 NUDT16Q96DE0 195 aaKnown RBP14.49□□□□□ -0.09
PACS1-202ENST00000524784 KNSTRNQ9Y448 316 aa14.49□□□□□ -0.09
PACS1-202ENST00000524784 RBM33Q96EV2 1170 aaKnown RBP14.48□□□□□ -0.09
PACS1-202ENST00000524784 TERF2IPQ9NYB0 399 aa14.48□□□□□ -0.09
PACS1-202ENST00000524784 CCDC61Q9Y6R9 512 aa14.48□□□□□ -0.09
PACS1-202ENST00000524784 NWD1Q149M9 1564 aa14.47□□□□□ -0.09
PACS1-202ENST00000524784 NKTRP30414 1462 aaKnown RBP14.47□□□□□ -0.09
PACS1-202ENST00000524784 PER1O15534 1290 aaPredicted RBP14.47□□□□□ -0.09
PACS1-202ENST00000524784 HDGFL2Q7Z4V5 671 aaPredicted RBP14.47□□□□□ -0.09
PACS1-202ENST00000524784 CABP1Q9NZU7 370 aa14.47□□□□□ -0.09
PACS1-202ENST00000524784 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.46□□□□□ -0.09
PACS1-202ENST00000524784 ADGRB2O60241 1585 aa14.46□□□□□ -0.09
PACS1-202ENST00000524784 NUTM2FA1L443 756 aa14.45□□□□□ -0.1
PACS1-202ENST00000524784 CNGB1Q14028 1251 aaPredicted RBP14.45□□□□□ -0.1
PACS1-202ENST00000524784 ANKRD36BQ8N2N9 1353 aa14.45□□□□□ -0.1
PACS1-202ENST00000524784 ADGRL3Q9HAR2 1447 aa14.44□□□□□ -0.1
PACS1-202ENST00000524784 NCOA3Q9Y6Q9 1424 aa14.44□□□□□ -0.1
PACS1-202ENST00000524784 C19orf44Q9H6X5 657 aa14.44□□□□□ -0.1
PACS1-202ENST00000524784 ZNF335Q9H4Z2 1342 aaPredicted RBP14.43□□□□□ -0.1
PACS1-202ENST00000524784 CARD14Q9BXL6 1004 aa14.43□□□□□ -0.1
PACS1-202ENST00000524784 PRKRIP1Q9H875 184 aaPredicted RBP14.43□□□□□ -0.1
PACS1-202ENST00000524784 TMEM94Q12767 1356 aa14.43□□□□□ -0.1
PACS1-202ENST00000524784 PRR36Q9H6K5 1346 aa14.42□□□□□ -0.1
PACS1-202ENST00000524784 PPIP5K1Q6PFW1 1433 aa14.42□□□□□ -0.1
PACS1-202ENST00000524784 RALBP1Q15311 655 aa14.42□□□□□ -0.1
PACS1-202ENST00000524784 CC2D1BQ5T0F9 858 aaKnown RBP14.42□□□□□ -0.1
PACS1-202ENST00000524784 ZNF692Q9BU19 519 aaPredicted RBP14.42□□□□□ -0.1
PACS1-202ENST00000524784 KTN1Q86UP2 1357 aaKnown RBP14.42□□□□□ -0.1
PACS1-202ENST00000524784 MYOM1P52179 1685 aa14.42□□□□□ -0.1
PACS1-202ENST00000524784 ANKARQ7Z5J8 1434 aa14.41□□□□□ -0.1
PACS1-202ENST00000524784 PLEKHG3A1L390 1219 aa14.41□□□□□ -0.1
PACS1-202ENST00000524784 ATF3P18847 181 aa14.41□□□□□ -0.1
PACS1-202ENST00000524784 CCER2I3L3R5 266 aa14.4□□□□□ -0.1
PACS1-202ENST00000524784 NSD3Q9BZ95 1437 aa14.4□□□□□ -0.1
PACS1-202ENST00000524784 CGNL1Q0VF96 1302 aa14.4□□□□□ -0.1
PACS1-202ENST00000524784 CDC42BPGQ6DT37 1551 aa14.39□□□□□ -0.11
PACS1-202ENST00000524784 ATP7BP35670 1465 aa14.39□□□□□ -0.11
PACS1-202ENST00000524784 A0A1W2PP64 1363 aa14.39□□□□□ -0.11
PACS1-202ENST00000524784 MSH6P52701 1360 aa14.39□□□□□ -0.11
PACS1-202ENST00000524784 NPC1L1Q9UHC9 1359 aa14.39□□□□□ -0.11
PACS1-202ENST00000524784 AMER1Q5JTC6 1135 aaPredicted RBP14.39□□□□□ -0.11
PACS1-202ENST00000524784 NGDNQ8NEJ9 315 aaKnown RBP14.39□□□□□ -0.11
PACS1-202ENST00000524784 CADPS2Q86UW7 1296 aa14.38□□□□□ -0.11
PACS1-202ENST00000524784 PMFBP1Q8TBY8 1022 aa14.37□□□□□ -0.11
PACS1-202ENST00000524784 NALCNQ8IZF0 1738 aa14.37□□□□□ -0.11
PACS1-202ENST00000524784 ACEP12821 1306 aa14.37□□□□□ -0.11
PACS1-202ENST00000524784 STRCP1A6NGW2 1772 aa14.37□□□□□ -0.11
PACS1-202ENST00000524784 CPSF1Q10570 1443 aaKnown RBP14.36□□□□□ -0.11
PACS1-202ENST00000524784 ESCO1Q5FWF5 840 aa14.36□□□□□ -0.11
PACS1-202ENST00000524784 PHF8Q9UPP1 1060 aa14.36□□□□□ -0.11
PACS1-202ENST00000524784 CD163L1Q9NR16 1453 aa14.36□□□□□ -0.11
PACS1-202ENST00000524784 LRRC7Q96NW7 1537 aa14.36□□□□□ -0.11
PACS1-202ENST00000524784 FMN2Q9NZ56 1722 aa14.35□□□□□ -0.11
PACS1-202ENST00000524784 DCCP43146 1447 aa14.35□□□□□ -0.11
PACS1-202ENST00000524784 MORC1Q86VD1 984 aa14.35□□□□□ -0.11
PACS1-202ENST00000524784 MYBBP1AQ9BQG0 1328 aaKnown RBP14.35□□□□□ -0.11
PACS1-202ENST00000524784 NSD2O96028 1365 aa14.34□□□□□ -0.11
PACS1-202ENST00000524784 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.34□□□□□ -0.11
PACS1-202ENST00000524784 PARD3Q8TEW0 1356 aa14.34□□□□□ -0.11
PACS1-202ENST00000524784 EDC4Q6P2E9 1401 aaKnown RBP14.32□□□□□ -0.12
PACS1-202ENST00000524784 ITSN1Q15811 1721 aa14.32□□□□□ -0.12
PACS1-202ENST00000524784 FYB1O15117 783 aa14.32□□□□□ -0.12
PACS1-202ENST00000524784 USP32Q8NFA0 1604 aa14.32□□□□□ -0.12
PACS1-202ENST00000524784 POLR3AO14802 1390 aaPredicted RBP14.32□□□□□ -0.12
PACS1-202ENST00000524784 TOPAZ1Q8N9V7 1692 aa14.31□□□□□ -0.12
PACS1-202ENST00000524784 PSME1Q06323 249 aa14.31□□□□□ -0.12
PACS1-202ENST00000524784 NLRP13Q86W25 1043 aa14.31□□□□□ -0.12
PACS1-202ENST00000524784 ORAI2Q96SN7 254 aa14.31□□□□□ -0.12
PACS1-202ENST00000524784 MRS2Q9HD23 443 aa14.31□□□□□ -0.12
PACS1-202ENST00000524784 C1orf167Q5SNV9 1468 aa14.31□□□□□ -0.12
PACS1-202ENST00000524784 GGNBP2Q9H3C7 697 aa14.3□□□□□ -0.12
PACS1-202ENST00000524784 TTC21BQ7Z4L5 1316 aa14.3□□□□□ -0.12
PACS1-202ENST00000524784 USP6P35125 1406 aa14.3□□□□□ -0.12
PACS1-202ENST00000524784 PPP2R1AP30153 589 aa14.29□□□□□ -0.12
PACS1-202ENST00000524784 TTC21AQ8NDW8 1320 aa14.29□□□□□ -0.12
PACS1-202ENST00000524784 MST1RQ04912 1400 aa14.29□□□□□ -0.12
PACS1-202ENST00000524784 RGPD8O14715 1765 aaPredicted RBP14.28□□□□□ -0.12
PACS1-202ENST00000524784 BRD4O60885 1362 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms