RNA–Protein interactions for RNA: ENST00000524775.1

CSTF3-205, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 4

Gene CSTF3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-205ENST00000524775 YTHDC1Q96MU7 727 aaKnown RBP16.12■□□□□ 0.17
CSTF3-205ENST00000524775 TBX22Q9Y458 520 aa16.12■□□□□ 0.17
CSTF3-205ENST00000524775 AMER1Q5JTC6 1135 aaPredicted RBP16.11■□□□□ 0.17
CSTF3-205ENST00000524775 WAPLQ7Z5K2 1190 aa16.11■□□□□ 0.17
CSTF3-205ENST00000524775 CARD14Q9BXL6 1004 aa16.11■□□□□ 0.17
CSTF3-205ENST00000524775 NPC1L1Q9UHC9 1359 aa16.11■□□□□ 0.17
CSTF3-205ENST00000524775 USP32Q8NFA0 1604 aa16.1■□□□□ 0.17
CSTF3-205ENST00000524775 SAFB2Q14151 953 aaKnown RBP eCLIP16.1■□□□□ 0.17
CSTF3-205ENST00000524775 RALBP1Q15311 655 aa16.1■□□□□ 0.17
CSTF3-205ENST00000524775 POGKQ9P215 609 aa16.09■□□□□ 0.17
CSTF3-205ENST00000524775 MINK1Q8N4C8 1332 aaPredicted RBP16.09■□□□□ 0.17
CSTF3-205ENST00000524775 SLC26A8Q96RN1 970 aa16.08■□□□□ 0.16
CSTF3-205ENST00000524775 SLC12A5Q9H2X9 1139 aa16.08■□□□□ 0.16
CSTF3-205ENST00000524775 ROBO2Q9HCK4 1378 aa16.08■□□□□ 0.16
CSTF3-205ENST00000524775 ADGRB2O60241 1585 aa16.08■□□□□ 0.16
CSTF3-205ENST00000524775 CABP2Q9NPB3 220 aa16.07■□□□□ 0.16
CSTF3-205ENST00000524775 CD163L1Q9NR16 1453 aa16.06■□□□□ 0.16
CSTF3-205ENST00000524775 MYBBP1AQ9BQG0 1328 aaKnown RBP16.06■□□□□ 0.16
CSTF3-205ENST00000524775 BCANQ96GW7 911 aa16.05■□□□□ 0.16
CSTF3-205ENST00000524775 CDK19Q9BWU1 502 aa16.05■□□□□ 0.16
CSTF3-205ENST00000524775 PIK3R4Q99570 1358 aa16.04■□□□□ 0.16
CSTF3-205ENST00000524775 ANKLE2Q86XL3 938 aa16.04■□□□□ 0.16
CSTF3-205ENST00000524775 KNSTRNQ9Y448 316 aa16.04■□□□□ 0.16
CSTF3-205ENST00000524775 PTCH1Q13635 1447 aa16.03■□□□□ 0.16
CSTF3-205ENST00000524775 BRD4O60885 1362 aaPredicted RBP16.03■□□□□ 0.16
CSTF3-205ENST00000524775 ATAD2Q6PL18 1390 aa16.03■□□□□ 0.16
CSTF3-205ENST00000524775 NINLQ9Y2I6 1382 aa16.03■□□□□ 0.16
CSTF3-205ENST00000524775 CC2D1BQ5T0F9 858 aaKnown RBP16.03■□□□□ 0.16
CSTF3-205ENST00000524775 MRS2Q9HD23 443 aa16.03■□□□□ 0.16
CSTF3-205ENST00000524775 AKAP12Q02952 1782 aa16.03■□□□□ 0.16
CSTF3-205ENST00000524775 ANKRD26Q9UPS8 1709 aa16.02■□□□□ 0.16
CSTF3-205ENST00000524775 ANKRD36BQ8N2N9 1353 aa16.02■□□□□ 0.16
CSTF3-205ENST00000524775 TOPAZ1Q8N9V7 1692 aa16.02■□□□□ 0.16
CSTF3-205ENST00000524775 KDM4FA0A1W2PPD8 638 aa16.02■□□□□ 0.16
CSTF3-205ENST00000524775 CENPBP07199 599 aaPredicted RBP16.02■□□□□ 0.16
CSTF3-205ENST00000524775 CNGB1Q14028 1251 aaPredicted RBP16.02■□□□□ 0.16
CSTF3-205ENST00000524775 RGPD8O14715 1765 aaPredicted RBP16.01■□□□□ 0.15
CSTF3-205ENST00000524775 WASLO00401 505 aaPredicted RBP16.01■□□□□ 0.15
CSTF3-205ENST00000524775 AMOTL2Q9Y2J4 779 aa16.01■□□□□ 0.15
CSTF3-205ENST00000524775 NSD3Q9BZ95 1437 aa16.01■□□□□ 0.15
CSTF3-205ENST00000524775 SRPK2P78362 688 aaKnown RBP16■□□□□ 0.15
CSTF3-205ENST00000524775 TMC1Q8TDI8 760 aa16■□□□□ 0.15
CSTF3-205ENST00000524775 PNISRQ8TF01 805 aaKnown RBP16■□□□□ 0.15
CSTF3-205ENST00000524775 KIF20BQ96Q89 1820 aa15.99■□□□□ 0.15
CSTF3-205ENST00000524775 NPHP4O75161 1426 aaPredicted RBP15.99■□□□□ 0.15
CSTF3-205ENST00000524775 MON2Q7Z3U7 1717 aa15.99■□□□□ 0.15
CSTF3-205ENST00000524775 NLRP13Q86W25 1043 aa15.98■□□□□ 0.15
CSTF3-205ENST00000524775 A0A1W2PP64 1363 aa15.98■□□□□ 0.15
CSTF3-205ENST00000524775 ITSN1Q15811 1721 aa15.97■□□□□ 0.15
CSTF3-205ENST00000524775 PPP2R1AP30153 589 aa15.97■□□□□ 0.15
CSTF3-205ENST00000524775 ATP7BP35670 1465 aa15.97■□□□□ 0.15
CSTF3-205ENST00000524775 NWD1Q149M9 1564 aa15.96■□□□□ 0.14
CSTF3-205ENST00000524775 CDC42BPGQ6DT37 1551 aa15.96■□□□□ 0.14
CSTF3-205ENST00000524775 PRR36Q9H6K5 1346 aa15.95■□□□□ 0.14
CSTF3-205ENST00000524775 NCKAP5LQ9HCH0 1330 aa15.95■□□□□ 0.14
CSTF3-205ENST00000524775 CPSF1Q10570 1443 aaKnown RBP15.95■□□□□ 0.14
CSTF3-205ENST00000524775 NALCNQ8IZF0 1738 aa15.95■□□□□ 0.14
CSTF3-205ENST00000524775 FMN2Q9NZ56 1722 aa15.95■□□□□ 0.14
CSTF3-205ENST00000524775 KCNA6P17658 529 aa15.95■□□□□ 0.14
CSTF3-205ENST00000524775 CABP1Q9NZU7 370 aa15.95■□□□□ 0.14
CSTF3-205ENST00000524775 NUDT16Q96DE0 195 aaKnown RBP15.94■□□□□ 0.14
CSTF3-205ENST00000524775 STRCQ7RTU9 1775 aa15.94■□□□□ 0.14
CSTF3-205ENST00000524775 STRCP1A6NGW2 1772 aa15.93■□□□□ 0.14
CSTF3-205ENST00000524775 FAM9BQ8IZU0 186 aa15.93■□□□□ 0.14
CSTF3-205ENST00000524775 PPIP5K1Q6PFW1 1433 aa15.92■□□□□ 0.14
CSTF3-205ENST00000524775 NSD2O96028 1365 aa15.91■□□□□ 0.14
CSTF3-205ENST00000524775 TERF2IPQ9NYB0 399 aa15.91■□□□□ 0.14
CSTF3-205ENST00000524775 NRKQ7Z2Y5 1582 aa15.91■□□□□ 0.14
CSTF3-205ENST00000524775 CGNL1Q0VF96 1302 aa15.91■□□□□ 0.14
CSTF3-205ENST00000524775 CCDC61Q9Y6R9 512 aa15.9■□□□□ 0.14
CSTF3-205ENST00000524775 LMTK3Q96Q04 1460 aa15.9■□□□□ 0.14
CSTF3-205ENST00000524775 INSRP06213 1382 aa15.89■□□□□ 0.13
CSTF3-205ENST00000524775 SHPRHQ149N8 1683 aa15.89■□□□□ 0.13
CSTF3-205ENST00000524775 PLEKHG3A1L390 1219 aa15.88■□□□□ 0.13
CSTF3-205ENST00000524775 FYB1O15117 783 aa15.88■□□□□ 0.13
CSTF3-205ENST00000524775 HDGFL2Q7Z4V5 671 aaPredicted RBP15.88■□□□□ 0.13
CSTF3-205ENST00000524775 MAP2P11137 1827 aaKnown RBP15.88■□□□□ 0.13
CSTF3-205ENST00000524775 NKTRP30414 1462 aaKnown RBP15.88■□□□□ 0.13
CSTF3-205ENST00000524775 HNRNPUQ00839 825 aaKnown RBP eCLIP15.87■□□□□ 0.13
CSTF3-205ENST00000524775 MORC1Q86VD1 984 aa15.86■□□□□ 0.13
CSTF3-205ENST00000524775 EDC4Q6P2E9 1401 aaKnown RBP15.85■□□□□ 0.13
CSTF3-205ENST00000524775 POLR3AO14802 1390 aaPredicted RBP15.85■□□□□ 0.13
CSTF3-205ENST00000524775 BLMP54132 1417 aaPredicted RBP15.85■□□□□ 0.13
CSTF3-205ENST00000524775 ANKARQ7Z5J8 1434 aa15.85■□□□□ 0.13
CSTF3-205ENST00000524775 XIRP1Q702N8 1843 aaKnown RBP15.84■□□□□ 0.13
CSTF3-205ENST00000524775 SSH2Q76I76 1423 aa15.84■□□□□ 0.13
CSTF3-205ENST00000524775 HSPA2P54652 639 aa15.83■□□□□ 0.12
CSTF3-205ENST00000524775 ADGRL3Q9HAR2 1447 aa15.83■□□□□ 0.12
CSTF3-205ENST00000524775 ZNF692Q9BU19 519 aaPredicted RBP15.82■□□□□ 0.12
CSTF3-205ENST00000524775 GGNBP2Q9H3C7 697 aa15.82■□□□□ 0.12
CSTF3-205ENST00000524775 ZBED9Q6R2W3 1325 aa15.82■□□□□ 0.12
CSTF3-205ENST00000524775 ACEP12821 1306 aa15.81■□□□□ 0.12
CSTF3-205ENST00000524775 MARF1Q9Y4F3 1742 aaKnown RBP15.81■□□□□ 0.12
CSTF3-205ENST00000524775 USP54Q70EL1 1684 aa15.79■□□□□ 0.12
CSTF3-205ENST00000524775 COL3A1P02461 1466 aaPredicted RBP15.79■□□□□ 0.12
CSTF3-205ENST00000524775 USP6P35125 1406 aa15.79■□□□□ 0.12
CSTF3-205ENST00000524775 NUTM2FA1L443 756 aa15.79■□□□□ 0.12
CSTF3-205ENST00000524775 ADAMTS8Q9UP79 889 aa15.79■□□□□ 0.12
CSTF3-205ENST00000524775 RBM33Q96EV2 1170 aaKnown RBP15.78■□□□□ 0.12
CSTF3-205ENST00000524775 SCAF1Q9H7N4 1312 aaKnown RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms