RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 MMP16P51512 607 aa7.28□□□□□ -1.24
CSDE1-208ENST00000524652 TTLL12Q14166 644 aaPredicted RBP7.28□□□□□ -1.24
CSDE1-208ENST00000524652 USB1Q9BQ65 265 aaKnown RBP7.28□□□□□ -1.24
CSDE1-208ENST00000524652 REPIN1Q9BWE0 567 aaKnown RBP7.28□□□□□ -1.24
CSDE1-208ENST00000524652 NUTM1Q86Y26 1132 aa7.27□□□□□ -1.25
CSDE1-208ENST00000524652 HLA-CQ95604 372 aa7.27□□□□□ -1.25
CSDE1-208ENST00000524652 DXOO77932 396 aaKnown RBP7.26□□□□□ -1.25
CSDE1-208ENST00000524652 CD2BP2O95400 341 aaKnown RBP7.26□□□□□ -1.25
CSDE1-208ENST00000524652 SSTR3P32745 418 aaPredicted RBP7.26□□□□□ -1.25
CSDE1-208ENST00000524652 TNFRSF10AO00220 468 aa7.25□□□□□ -1.25
CSDE1-208ENST00000524652 ZBTB24O43167 697 aaPredicted RBP7.25□□□□□ -1.25
CSDE1-208ENST00000524652 PKDCCQ504Y2 493 aa7.25□□□□□ -1.25
CSDE1-208ENST00000524652 GIGYF2Q6Y7W6 1299 aaKnown RBP7.25□□□□□ -1.25
CSDE1-208ENST00000524652 DGAT1O75907 488 aa7.24□□□□□ -1.25
CSDE1-208ENST00000524652 GUCA2AQ02747 115 aa7.24□□□□□ -1.25
CSDE1-208ENST00000524652 PKD2L1Q9P0L9 805 aa7.24□□□□□ -1.25
CSDE1-208ENST00000524652 RETREG3Q86VR2 466 aa7.23□□□□□ -1.25
CSDE1-208ENST00000524652 FDX1P10109 184 aa7.22□□□□□ -1.25
CSDE1-208ENST00000524652 SPIRE2Q8WWL2 714 aa7.22□□□□□ -1.25
CSDE1-208ENST00000524652 AK7Q96M32 723 aa7.22□□□□□ -1.25
CSDE1-208ENST00000524652 FAM187AA6NFU0 413 aa7.21□□□□□ -1.26
CSDE1-208ENST00000524652 TRIM66O15016 1216 aa7.21□□□□□ -1.26
CSDE1-208ENST00000524652 FOXC1Q12948 553 aa7.21□□□□□ -1.26
CSDE1-208ENST00000524652 TRIM32Q13049 653 aa7.21□□□□□ -1.26
CSDE1-208ENST00000524652 PARP9Q8IXQ6 854 aa7.21□□□□□ -1.26
CSDE1-208ENST00000524652 JUNDP17535 347 aa7.2□□□□□ -1.26
CSDE1-208ENST00000524652 MYT1Q01538 1121 aa7.2□□□□□ -1.26
CSDE1-208ENST00000524652 DIXDC1Q155Q3 683 aa7.2□□□□□ -1.26
CSDE1-208ENST00000524652 PCDHGC3Q9UN70 934 aa7.2□□□□□ -1.26
CSDE1-208ENST00000524652 GJA5P36382 358 aa7.19□□□□□ -1.26
CSDE1-208ENST00000524652 SYMPKQ92797 1274 aaKnown RBP7.19□□□□□ -1.26
CSDE1-208ENST00000524652 BEGAINQ9BUH8 593 aa7.19□□□□□ -1.26
CSDE1-208ENST00000524652 TOR4AQ9NXH8 423 aa7.19□□□□□ -1.26
CSDE1-208ENST00000524652 MOXD2PA6NHM9 499 aa7.18□□□□□ -1.26
CSDE1-208ENST00000524652 C6orf229H3BNL8 230 aa7.18□□□□□ -1.26
CSDE1-208ENST00000524652 WNT7AO00755 349 aa7.18□□□□□ -1.26
CSDE1-208ENST00000524652 SPDYE5A6NIY4 337 aa7.17□□□□□ -1.26
CSDE1-208ENST00000524652 CYP4X1Q8N118 509 aa7.17□□□□□ -1.26
CSDE1-208ENST00000524652 CCDC24Q8N4L8 307 aa7.17□□□□□ -1.26
CSDE1-208ENST00000524652 NUDT12Q9BQG2 462 aa7.17□□□□□ -1.26
CSDE1-208ENST00000524652 AVPP01185 164 aa7.16□□□□□ -1.26
CSDE1-208ENST00000524652 MS4A1P11836 297 aa7.16□□□□□ -1.26
CSDE1-208ENST00000524652 NDUFV2P19404 249 aa7.16□□□□□ -1.26
CSDE1-208ENST00000524652 WNT7BP56706 349 aa7.16□□□□□ -1.26
CSDE1-208ENST00000524652 MTMR2Q13614 643 aa7.16□□□□□ -1.26
CSDE1-208ENST00000524652 CRIPAKQ8N1N5 446 aa7.16□□□□□ -1.26
CSDE1-208ENST00000524652 ZNF787Q6DD87 383 aa7.15□□□□□ -1.26
CSDE1-208ENST00000524652 DESI1Q6ICB0 168 aa7.15□□□□□ -1.26
CSDE1-208ENST00000524652 TBC1D2Q9BYX2 928 aa7.15□□□□□ -1.26
CSDE1-208ENST00000524652 CCNYL3P0C7X3 344 aa7.14□□□□□ -1.27
CSDE1-208ENST00000524652 PDE4DQ08499 809 aa7.14□□□□□ -1.27
CSDE1-208ENST00000524652 PTPRNQ16849 979 aa7.14□□□□□ -1.27
CSDE1-208ENST00000524652 RSBN1LQ6PCB5 846 aaPredicted RBP7.14□□□□□ -1.27
CSDE1-208ENST00000524652 TTC24A2A3L6 582 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-208ENST00000524652 CTC1Q2NKJ3 1217 aa7.13□□□□□ -1.27
CSDE1-208ENST00000524652 SNIP1Q8TAD8 396 aaKnown RBP7.13□□□□□ -1.27
CSDE1-208ENST00000524652 MRGPRX2Q96LB1 330 aa7.13□□□□□ -1.27
CSDE1-208ENST00000524652 SLC24A3Q9HC58 644 aa7.13□□□□□ -1.27
CSDE1-208ENST00000524652 AAASQ9NRG9 546 aa7.13□□□□□ -1.27
CSDE1-208ENST00000524652 SPTLC1O15269 473 aa7.12□□□□□ -1.27
CSDE1-208ENST00000524652 PRR7Q8TB68 274 aa7.12□□□□□ -1.27
CSDE1-208ENST00000524652 ST8SIA5O15466 376 aa7.11□□□□□ -1.27
CSDE1-208ENST00000524652 SMCPP49901 116 aaPredicted RBP7.11□□□□□ -1.27
CSDE1-208ENST00000524652 SKOR1P84550 965 aa7.11□□□□□ -1.27
CSDE1-208ENST00000524652 RC3H1Q5TC82 1133 aaKnown RBP7.11□□□□□ -1.27
CSDE1-208ENST00000524652 PRPF38BQ5VTL8 546 aaKnown RBP7.11□□□□□ -1.27
CSDE1-208ENST00000524652 EVA1BQ9NVM1 165 aa7.11□□□□□ -1.27
CSDE1-208ENST00000524652 PTCRAQ6ISU1 281 aaPredicted RBP7.1□□□□□ -1.27
CSDE1-208ENST00000524652 ZBTB3Q9H5J0 574 aa7.1□□□□□ -1.27
CSDE1-208ENST00000524652 AXIN1O15169 862 aa7.09□□□□□ -1.27
CSDE1-208ENST00000524652 SMPD1P17405 629 aa7.09□□□□□ -1.27
CSDE1-208ENST00000524652 RIC3Q7Z5B4 369 aa7.09□□□□□ -1.27
CSDE1-208ENST00000524652 BCANQ96GW7 911 aa7.09□□□□□ -1.27
CSDE1-208ENST00000524652 HRCP23327 699 aa7.08□□□□□ -1.28
CSDE1-208ENST00000524652 KCNH2Q12809 1159 aa7.08□□□□□ -1.28
CSDE1-208ENST00000524652 TUSC1Q2TAM9 212 aa7.08□□□□□ -1.28
CSDE1-208ENST00000524652 MYSM1Q5VVJ2 828 aa7.08□□□□□ -1.28
CSDE1-208ENST00000524652 UNC93B1Q9H1C4 597 aa7.08□□□□□ -1.28
CSDE1-208ENST00000524652 PCDHB15Q9Y5E8 787 aa7.08□□□□□ -1.28
CSDE1-208ENST00000524652 CFAP99D6REC4 459 aa7.07□□□□□ -1.28
CSDE1-208ENST00000524652 J3QL48 77 aa7.07□□□□□ -1.28
CSDE1-208ENST00000524652 LYPD8Q6UX82 237 aa7.07□□□□□ -1.28
CSDE1-208ENST00000524652 EHBP1Q8NDI1 1231 aa7.07□□□□□ -1.28
CSDE1-208ENST00000524652 SLC24A1O60721 1099 aa7.06□□□□□ -1.28
CSDE1-208ENST00000524652 SH3BP2P78314 561 aa7.06□□□□□ -1.28
CSDE1-208ENST00000524652 POTECB2RU33 542 aa7.05□□□□□ -1.28
CSDE1-208ENST00000524652 SIAH2O43255 324 aa7.05□□□□□ -1.28
CSDE1-208ENST00000524652 LIMD1Q9UGP4 676 aa7.05□□□□□ -1.28
CSDE1-208ENST00000524652 ZNF511Q8NB15 262 aa7.04□□□□□ -1.28
CSDE1-208ENST00000524652 ZNF775Q96BV0 537 aaPredicted RBP7.04□□□□□ -1.28
CSDE1-208ENST00000524652 RSPH6AQ9H0K4 717 aa7.04□□□□□ -1.28
CSDE1-208ENST00000524652 DACH1Q9UI36 760 aa7.04□□□□□ -1.28
CSDE1-208ENST00000524652 LILRB3O75022 631 aa7.03□□□□□ -1.28
CSDE1-208ENST00000524652 ALDH1A1P00352 501 aa7.03□□□□□ -1.28
CSDE1-208ENST00000524652 F12P00748 615 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-208ENST00000524652 CLK2P49760 499 aaKnown RBP7.03□□□□□ -1.28
CSDE1-208ENST00000524652 CSPP1Q1MSJ5 1256 aa7.03□□□□□ -1.28
CSDE1-208ENST00000524652 CABLES1Q8TDN4 633 aa7.03□□□□□ -1.28
CSDE1-208ENST00000524652 BAP1Q92560 729 aa7.03□□□□□ -1.28
CSDE1-208ENST00000524652 HPS1Q92902 700 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms