RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 TMEM131LA2VDJ0 1609 aa11.67□□□□□ -0.54
PKP3-202ENST00000524646 E9PSI1 815 aa11.66□□□□□ -0.54
PKP3-202ENST00000524646 CCDC146Q8IYE0 955 aa11.66□□□□□ -0.54
PKP3-202ENST00000524646 DEKP35659 375 aaKnown RBP11.65□□□□□ -0.54
PKP3-202ENST00000524646 RTL5Q5HYW3 569 aaPredicted RBP11.65□□□□□ -0.54
PKP3-202ENST00000524646 NPM2Q86SE8 214 aaKnown RBP11.65□□□□□ -0.54
PKP3-202ENST00000524646 DDRGK1Q96HY6 314 aa11.65□□□□□ -0.54
PKP3-202ENST00000524646 CARD14Q9BXL6 1004 aa11.65□□□□□ -0.54
PKP3-202ENST00000524646 ZFYVE9O95405 1425 aa11.64□□□□□ -0.55
PKP3-202ENST00000524646 NBR1Q14596 966 aa11.64□□□□□ -0.55
PKP3-202ENST00000524646 C14orf93Q9H972 538 aaKnown RBP11.64□□□□□ -0.55
PKP3-202ENST00000524646 APAF1O14727 1248 aa11.63□□□□□ -0.55
PKP3-202ENST00000524646 ANKRD36BQ8N2N9 1353 aa11.63□□□□□ -0.55
PKP3-202ENST00000524646 SETD1AO15047 1707 aaKnown RBP11.63□□□□□ -0.55
PKP3-202ENST00000524646 REREQ9P2R6 1566 aa11.62□□□□□ -0.55
PKP3-202ENST00000524646 PUS7Q96PZ0 661 aaKnown RBP11.61□□□□□ -0.55
PKP3-202ENST00000524646 COL3A1P02461 1466 aaPredicted RBP11.61□□□□□ -0.55
PKP3-202ENST00000524646 CDC42BPGQ6DT37 1551 aa11.61□□□□□ -0.55
PKP3-202ENST00000524646 CGNL1Q0VF96 1302 aa11.6□□□□□ -0.55
PKP3-202ENST00000524646 MED14O60244 1454 aa11.6□□□□□ -0.55
PKP3-202ENST00000524646 PTPRMP28827 1452 aa11.6□□□□□ -0.55
PKP3-202ENST00000524646 NPM1P06748 294 aaKnown RBP eCLIP11.6□□□□□ -0.55
PKP3-202ENST00000524646 CHGAP10645 457 aaKnown RBP11.6□□□□□ -0.55
PKP3-202ENST00000524646 RIMBP3CA6NJZ7 1639 aa11.6□□□□□ -0.55
PKP3-202ENST00000524646 RIMBP3BA6NNM3 1639 aa11.6□□□□□ -0.55
PKP3-202ENST00000524646 RIMBP3Q9UFD9 1639 aa11.6□□□□□ -0.55
PKP3-202ENST00000524646 FAM161AQ3B820 660 aa11.59□□□□□ -0.55
PKP3-202ENST00000524646 MORC1Q86VD1 984 aa11.59□□□□□ -0.55
PKP3-202ENST00000524646 SPINK5Q9NQ38 1064 aaPredicted RBP11.59□□□□□ -0.55
PKP3-202ENST00000524646 TRAK1Q9UPV9 953 aa11.59□□□□□ -0.55
PKP3-202ENST00000524646 PPM1GO15355 546 aaPredicted RBP11.58□□□□□ -0.56
PKP3-202ENST00000524646 SKAP1Q86WV1 359 aa11.58□□□□□ -0.56
PKP3-202ENST00000524646 EVC2Q86UK5 1308 aa11.58□□□□□ -0.56
PKP3-202ENST00000524646 KNDC1Q76NI1 1749 aa11.57□□□□□ -0.56
PKP3-202ENST00000524646 ZMYM3Q14202 1370 aa11.57□□□□□ -0.56
PKP3-202ENST00000524646 ABCC11Q96J66 1382 aa11.57□□□□□ -0.56
PKP3-202ENST00000524646 PDE3AQ14432 1141 aa11.57□□□□□ -0.56
PKP3-202ENST00000524646 RUNDC1Q96C34 613 aa11.57□□□□□ -0.56
PKP3-202ENST00000524646 CFAP53Q96M91 514 aa11.57□□□□□ -0.56
PKP3-202ENST00000524646 DMRT2Q9Y5R5 561 aa11.57□□□□□ -0.56
PKP3-202ENST00000524646 DLC1Q96QB1 1528 aa11.56□□□□□ -0.56
PKP3-202ENST00000524646 C8orf34Q49A92 452 aa11.56□□□□□ -0.56
PKP3-202ENST00000524646 NCBP3Q53F19 620 aaKnown RBP11.56□□□□□ -0.56
PKP3-202ENST00000524646 WWC1Q8IX03 1113 aa11.56□□□□□ -0.56
PKP3-202ENST00000524646 PHF23Q9BUL5 403 aaPredicted RBP11.56□□□□□ -0.56
PKP3-202ENST00000524646 USP35Q9P2H5 1018 aa11.56□□□□□ -0.56
PKP3-202ENST00000524646 ALKQ9UM73 1620 aa11.56□□□□□ -0.56
PKP3-202ENST00000524646 YEATS2Q9ULM3 1422 aa11.55□□□□□ -0.56
PKP3-202ENST00000524646 BCAR3O75815 825 aa11.55□□□□□ -0.56
PKP3-202ENST00000524646 CCDC27Q2M243 656 aa11.55□□□□□ -0.56
PKP3-202ENST00000524646 GGT6Q6P531 493 aa11.55□□□□□ -0.56
PKP3-202ENST00000524646 NLRP1Q9C000 1473 aa11.55□□□□□ -0.56
PKP3-202ENST00000524646 ITSN1Q15811 1721 aa11.55□□□□□ -0.56
PKP3-202ENST00000524646 ATAD2Q6PL18 1390 aa11.54□□□□□ -0.56
PKP3-202ENST00000524646 DIP2BQ9P265 1576 aa11.54□□□□□ -0.56
PKP3-202ENST00000524646 CANXP27824 592 aaKnown RBP11.54□□□□□ -0.56
PKP3-202ENST00000524646 AAMPQ13685 434 aa11.54□□□□□ -0.56
PKP3-202ENST00000524646 SLC12A5Q9H2X9 1139 aa11.54□□□□□ -0.56
PKP3-202ENST00000524646 LAS1LQ9Y4W2 734 aaKnown RBP11.54□□□□□ -0.56
PKP3-202ENST00000524646 MON2Q7Z3U7 1717 aa11.54□□□□□ -0.56
PKP3-202ENST00000524646 MAPK8IP3Q9UPT6 1336 aa11.54□□□□□ -0.56
PKP3-202ENST00000524646 A0A1W2PP64 1363 aa11.54□□□□□ -0.56
PKP3-202ENST00000524646 CD163L1Q9NR16 1453 aa11.53□□□□□ -0.56
PKP3-202ENST00000524646 VGFO15240 615 aaPredicted RBP11.53□□□□□ -0.56
PKP3-202ENST00000524646 TMEM132EQ6IEE7 984 aa11.53□□□□□ -0.56
PKP3-202ENST00000524646 WDR63Q8IWG1 891 aa11.53□□□□□ -0.56
PKP3-202ENST00000524646 CLUAP1Q96AJ1 413 aa11.53□□□□□ -0.56
PKP3-202ENST00000524646 AGLP35573 1532 aa11.53□□□□□ -0.56
PKP3-202ENST00000524646 LRRC7Q96NW7 1537 aa11.53□□□□□ -0.56
PKP3-202ENST00000524646 SPATA31D1Q6ZQQ2 1576 aa11.53□□□□□ -0.56
PKP3-202ENST00000524646 YTHDC2Q9H6S0 1430 aaKnown RBP11.52□□□□□ -0.56
PKP3-202ENST00000524646 AKAP12Q02952 1782 aa11.52□□□□□ -0.57
PKP3-202ENST00000524646 NRXN3Q9Y4C0 1643 aa11.51□□□□□ -0.57
PKP3-202ENST00000524646 NEFMP07197 916 aa11.51□□□□□ -0.57
PKP3-202ENST00000524646 RGS3P49796 1198 aa11.51□□□□□ -0.57
PKP3-202ENST00000524646 TCP11L2Q8N4U5 519 aa11.51□□□□□ -0.57
PKP3-202ENST00000524646 TSPOAP1O95153 1857 aa11.51□□□□□ -0.57
PKP3-202ENST00000524646 ATP7BP35670 1465 aa11.51□□□□□ -0.57
PKP3-202ENST00000524646 ARHGEF40Q8TER5 1519 aa11.5□□□□□ -0.57
PKP3-202ENST00000524646 MTHFSP49914 203 aa11.5□□□□□ -0.57
PKP3-202ENST00000524646 RARSP54136 660 aaKnown RBP11.5□□□□□ -0.57
PKP3-202ENST00000524646 OSCARQ8IYS5 282 aa11.5□□□□□ -0.57
PKP3-202ENST00000524646 MAP2P11137 1827 aaKnown RBP11.5□□□□□ -0.57
PKP3-202ENST00000524646 DLG5Q8TDM6 1919 aa11.49□□□□□ -0.57
PKP3-202ENST00000524646 TNNT2P45379 298 aaPredicted RBP11.49□□□□□ -0.57
PKP3-202ENST00000524646 PANK1Q8TE04 598 aa11.49□□□□□ -0.57
PKP3-202ENST00000524646 MYH16Q9H6N6 1097 aa11.49□□□□□ -0.57
PKP3-202ENST00000524646 SLC52A1Q9NWF4 448 aa11.49□□□□□ -0.57
PKP3-202ENST00000524646 RRP7AQ9Y3A4 280 aaKnown RBP11.49□□□□□ -0.57
PKP3-202ENST00000524646 PMFBP1Q8TBY8 1022 aa11.48□□□□□ -0.57
PKP3-202ENST00000524646 COG6Q9Y2V7 657 aa11.48□□□□□ -0.57
PKP3-202ENST00000524646 NRKQ7Z2Y5 1582 aa11.48□□□□□ -0.57
PKP3-202ENST00000524646 RAPGEF3O95398 923 aa11.47□□□□□ -0.57
PKP3-202ENST00000524646 CT47B1P0C2W7 299 aaPredicted RBP11.47□□□□□ -0.57
PKP3-202ENST00000524646 DAXXQ9UER7 740 aaPredicted RBP11.47□□□□□ -0.57
PKP3-202ENST00000524646 C3P01024 1663 aa11.46□□□□□ -0.57
PKP3-202ENST00000524646 IGHDP01880 384 aa11.46□□□□□ -0.57
PKP3-202ENST00000524646 CABP2Q9NPB3 220 aa11.46□□□□□ -0.57
PKP3-202ENST00000524646 CPS1P31327 1500 aa11.45□□□□□ -0.58
PKP3-202ENST00000524646 U2AF1L5P0DN76 240 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms