RNA–Protein interactions for RNA: ENST00000524528.1

FGFR1-225, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 3

Gene FGFR1, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-225ENST00000524528 PTCH1Q13635 1447 aa15.25■□□□□ 0.03
FGFR1-225ENST00000524528 ESCO1Q5FWF5 840 aa15.24■□□□□ 0.03
FGFR1-225ENST00000524528 FNBP4Q8N3X1 1017 aaPredicted RBP15.24■□□□□ 0.03
FGFR1-225ENST00000524528 PLEKHH1Q9ULM0 1364 aa15.24■□□□□ 0.03
FGFR1-225ENST00000524528 KIF1BO60333 1816 aa15.23■□□□□ 0.03
FGFR1-225ENST00000524528 FOXO3O43524 673 aa15.23■□□□□ 0.03
FGFR1-225ENST00000524528 MPHOSPH9Q99550 1183 aa15.23■□□□□ 0.03
FGFR1-225ENST00000524528 USP21Q9UK80 565 aa15.22■□□□□ 0.03
FGFR1-225ENST00000524528 PRAG1Q86YV5 1406 aa15.22■□□□□ 0.03
FGFR1-225ENST00000524528 LAMC1P11047 1609 aa15.21■□□□□ 0.02
FGFR1-225ENST00000524528 SPATA31E1Q6ZUB1 1445 aa15.2■□□□□ 0.02
FGFR1-225ENST00000524528 BCL9LQ86UU0 1499 aa15.18■□□□□ 0.02
FGFR1-225ENST00000524528 PPLO60437 1756 aa15.18■□□□□ 0.02
FGFR1-225ENST00000524528 PXDNQ92626 1479 aa15.17■□□□□ 0.02
FGFR1-225ENST00000524528 LRPPRCP42704 1394 aaKnown RBP15.17■□□□□ 0.02
FGFR1-225ENST00000524528 TRPC5Q9UL62 973 aaPredicted RBP15.17■□□□□ 0.02
FGFR1-225ENST00000524528 ATRNO75882 1429 aa15.17■□□□□ 0.02
FGFR1-225ENST00000524528 MYOM2P54296 1465 aa15.16■□□□□ 0.02
FGFR1-225ENST00000524528 ABCC11Q96J66 1382 aa15.16■□□□□ 0.02
FGFR1-225ENST00000524528 CFAP70Q5T0N1 1121 aa15.15■□□□□ 0.02
FGFR1-225ENST00000524528 NPHP3Q7Z494 1330 aa15.15■□□□□ 0.02
FGFR1-225ENST00000524528 C14orf93Q9H972 538 aaKnown RBP15.14■□□□□ 0.01
FGFR1-225ENST00000524528 TECPR2O15040 1411 aa15.13■□□□□ 0.01
FGFR1-225ENST00000524528 SPATA31A3Q5VYP0 1347 aa15.13■□□□□ 0.01
FGFR1-225ENST00000524528 CCDC144AA2RUR9 1427 aa15.12■□□□□ 0.01
FGFR1-225ENST00000524528 KRT28Q7Z3Y7 464 aa15.12■□□□□ 0.01
FGFR1-225ENST00000524528 CABLES1Q8TDN4 633 aa15.12■□□□□ 0.01
FGFR1-225ENST00000524528 GJD4Q96KN9 370 aaPredicted RBP15.12■□□□□ 0.01
FGFR1-225ENST00000524528 COL22A1Q8NFW1 1626 aaPredicted RBP15.11■□□□□ 0.01
FGFR1-225ENST00000524528 SIRT1Q96EB6 747 aa15.11■□□□□ 0.01
FGFR1-225ENST00000524528 SRCAPQ6ZRS2 3230 aa15.11■□□□□ 0.01
FGFR1-225ENST00000524528 ANKRD30BQ9BXX2 1392 aa15.11■□□□□ 0.01
FGFR1-225ENST00000524528 PIK3C2GO75747 1445 aa15.1■□□□□ 0.01
FGFR1-225ENST00000524528 YTHDC2Q9H6S0 1430 aaKnown RBP15.1■□□□□ 0.01
FGFR1-225ENST00000524528 CDC42BPGQ6DT37 1551 aa15.1■□□□□ 0.01
FGFR1-225ENST00000524528 PLEKHG5O94827 1062 aa15.09■□□□□ 0.01
FGFR1-225ENST00000524528 SAFB2Q14151 953 aaKnown RBP eCLIP15.09■□□□□ 0.01
FGFR1-225ENST00000524528 UNC5CLQ8IV45 518 aa15.08■□□□□ 0
FGFR1-225ENST00000524528 ATAD2Q6PL18 1390 aa15.08■□□□□ 0
FGFR1-225ENST00000524528 PHF8Q9UPP1 1060 aa15.07■□□□□ 0
FGFR1-225ENST00000524528 PRAM1Q96QH2 718 aa15.06■□□□□ 0
FGFR1-225ENST00000524528 SLIT2O94813 1529 aa15.06■□□□□ 0
FGFR1-225ENST00000524528 IFT172Q9UG01 1749 aa15.06■□□□□ 0
FGFR1-225ENST00000524528 FAM83GA6ND36 823 aa15.05■□□□□ -0
FGFR1-225ENST00000524528 PMFBP1Q8TBY8 1022 aa15.05■□□□□ -0
FGFR1-225ENST00000524528 RALGAPBQ86X10 1494 aa15.04■□□□□ -0
FGFR1-225ENST00000524528 EP400Q96L91 3159 aa15.04■□□□□ -0
FGFR1-225ENST00000524528 NRXN1Q9ULB1 1477 aa15.03■□□□□ -0
FGFR1-225ENST00000524528 DEFB132Q7Z7B7 95 aa15.03■□□□□ -0
FGFR1-225ENST00000524528 RGPD8O14715 1765 aaPredicted RBP15.03■□□□□ -0
FGFR1-225ENST00000524528 FMN2Q9NZ56 1722 aa15.03■□□□□ -0
FGFR1-225ENST00000524528 GLI3P10071 1580 aa15.02■□□□□ -0
FGFR1-225ENST00000524528 ONECUT3O60422 494 aaPredicted RBP15.02■□□□□ -0
FGFR1-225ENST00000524528 SEPT12Q8IYM1 358 aa15.02■□□□□ -0
FGFR1-225ENST00000524528 HIRIP3Q9BW71 556 aaPredicted RBP15.02■□□□□ -0
FGFR1-225ENST00000524528 DHX57Q6P158 1386 aaKnown RBP15.01□□□□□ -0.01
FGFR1-225ENST00000524528 PRR36Q9H6K5 1346 aa15.01□□□□□ -0.01
FGFR1-225ENST00000524528 PSME1Q06323 249 aa15.01□□□□□ -0.01
FGFR1-225ENST00000524528 TRAK1Q9UPV9 953 aa15.01□□□□□ -0.01
FGFR1-225ENST00000524528 VPS72Q15906 364 aa15□□□□□ -0.01
FGFR1-225ENST00000524528 LMOD2Q6P5Q4 547 aa15□□□□□ -0.01
FGFR1-225ENST00000524528 CCDC125Q86Z20 511 aa15□□□□□ -0.01
FGFR1-225ENST00000524528 ZRANB1Q9UGI0 708 aa15□□□□□ -0.01
FGFR1-225ENST00000524528 KDM2AQ9Y2K7 1162 aa15□□□□□ -0.01
FGFR1-225ENST00000524528 KNDC1Q76NI1 1749 aa15□□□□□ -0.01
FGFR1-225ENST00000524528 MARF1Q9Y4F3 1742 aaKnown RBP14.99□□□□□ -0.01
FGFR1-225ENST00000524528 POGKQ9P215 609 aa14.98□□□□□ -0.01
FGFR1-225ENST00000524528 TNS3Q68CZ2 1445 aa14.98□□□□□ -0.01
FGFR1-225ENST00000524528 SBNO1A3KN83 1393 aa14.98□□□□□ -0.01
FGFR1-225ENST00000524528 RAB3GAP2Q9H2M9 1393 aa14.98□□□□□ -0.01
FGFR1-225ENST00000524528 MINK1Q8N4C8 1332 aaPredicted RBP14.97□□□□□ -0.01
FGFR1-225ENST00000524528 USP32Q8NFA0 1604 aa14.96□□□□□ -0.01
FGFR1-225ENST00000524528 DCAF11Q8TEB1 546 aa14.96□□□□□ -0.01
FGFR1-225ENST00000524528 ADGRB1O14514 1584 aa14.95□□□□□ -0.02
FGFR1-225ENST00000524528 BRWD3Q6RI45 1802 aa14.95□□□□□ -0.02
FGFR1-225ENST00000524528 FAM182BQ5T319 152 aa14.95□□□□□ -0.02
FGFR1-225ENST00000524528 HAP1P54257 671 aaPredicted RBP14.94□□□□□ -0.02
FGFR1-225ENST00000524528 CCDC9Q9Y3X0 531 aaKnown RBP14.94□□□□□ -0.02
FGFR1-225ENST00000524528 BLMP54132 1417 aaPredicted RBP14.93□□□□□ -0.02
FGFR1-225ENST00000524528 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.93□□□□□ -0.02
FGFR1-225ENST00000524528 WASLO00401 505 aaPredicted RBP14.93□□□□□ -0.02
FGFR1-225ENST00000524528 KRT27Q7Z3Y8 459 aa14.93□□□□□ -0.02
FGFR1-225ENST00000524528 BTG4Q9NY30 223 aa14.93□□□□□ -0.02
FGFR1-225ENST00000524528 KIF1AQ12756 1690 aa14.93□□□□□ -0.02
FGFR1-225ENST00000524528 ACIN1Q9UKV3 1341 aaKnown RBP14.92□□□□□ -0.02
FGFR1-225ENST00000524528 FAM98CQ17RN3 349 aaKnown RBP14.92□□□□□ -0.02
FGFR1-225ENST00000524528 DLC1Q96QB1 1528 aa14.91□□□□□ -0.02
FGFR1-225ENST00000524528 ANKARQ7Z5J8 1434 aa14.91□□□□□ -0.02
FGFR1-225ENST00000524528 ARHGEF10O15013 1369 aa14.9□□□□□ -0.02
FGFR1-225ENST00000524528 NUDT16Q96DE0 195 aaKnown RBP14.88□□□□□ -0.03
FGFR1-225ENST00000524528 TRPM3Q9HCF6 1732 aaPredicted RBP14.88□□□□□ -0.03
FGFR1-225ENST00000524528 PSDA5PKW4 1024 aaPredicted RBP14.87□□□□□ -0.03
FGFR1-225ENST00000524528 PAK3O75914 559 aaPredicted RBP14.87□□□□□ -0.03
FGFR1-225ENST00000524528 CHRNA2Q15822 529 aa14.87□□□□□ -0.03
FGFR1-225ENST00000524528 NUTM2GQ5VZR2 741 aa14.87□□□□□ -0.03
FGFR1-225ENST00000524528 NGDNQ8NEJ9 315 aaKnown RBP14.87□□□□□ -0.03
FGFR1-225ENST00000524528 SPATA31A5Q5VU36 1347 aa14.87□□□□□ -0.03
FGFR1-225ENST00000524528 SPATA31A7Q8IWB4 1347 aa14.87□□□□□ -0.03
FGFR1-225ENST00000524528 PLCH1Q4KWH8 1693 aa14.87□□□□□ -0.03
FGFR1-225ENST00000524528 ABCA3Q99758 1704 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms