RNA–Protein interactions for RNA: ENST00000524516.1

PUM1-213, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 2

Gene PUM1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-213ENST00000524516 GIGYF1O75420 1035 aaPredicted RBP13.1□□□□□ -0.31
PUM1-213ENST00000524516 CHGAP10645 457 aaKnown RBP13.1□□□□□ -0.31
PUM1-213ENST00000524516 EZH2Q15910 746 aaKnown RBP13.1□□□□□ -0.31
PUM1-213ENST00000524516 SPON1Q9HCB6 807 aa13.1□□□□□ -0.31
PUM1-213ENST00000524516 SLIT2O94813 1529 aa13.09□□□□□ -0.31
PUM1-213ENST00000524516 TMEM131LA2VDJ0 1609 aa13.09□□□□□ -0.31
PUM1-213ENST00000524516 LMTK2Q8IWU2 1503 aa13.08□□□□□ -0.31
PUM1-213ENST00000524516 KIF15Q9NS87 1388 aa13.08□□□□□ -0.31
PUM1-213ENST00000524516 ADGRB2O60241 1585 aa13.08□□□□□ -0.32
PUM1-213ENST00000524516 DISP2A7MBM2 1401 aa13.08□□□□□ -0.32
PUM1-213ENST00000524516 ORAI2Q96SN7 254 aa13.08□□□□□ -0.32
PUM1-213ENST00000524516 TNS1Q9HBL0 1735 aaKnown RBP13.07□□□□□ -0.32
PUM1-213ENST00000524516 CEP350Q5VT06 3117 aa13.06□□□□□ -0.32
PUM1-213ENST00000524516 KCNQ2O43526 872 aa13.05□□□□□ -0.32
PUM1-213ENST00000524516 VPS72Q15906 364 aa13.05□□□□□ -0.32
PUM1-213ENST00000524516 PTPN23Q9H3S7 1636 aa13.05□□□□□ -0.32
PUM1-213ENST00000524516 NPHP3Q7Z494 1330 aa13.04□□□□□ -0.32
PUM1-213ENST00000524516 ONECUT3O60422 494 aaPredicted RBP13.03□□□□□ -0.32
PUM1-213ENST00000524516 NBPF8Q3BBV2 869 aa13.03□□□□□ -0.32
PUM1-213ENST00000524516 FAM182BQ5T319 152 aa13.03□□□□□ -0.32
PUM1-213ENST00000524516 NBPF14Q5TI25 921 aa13.03□□□□□ -0.32
PUM1-213ENST00000524516 RRP7BPQ9NSQ0 103 aa13.03□□□□□ -0.32
PUM1-213ENST00000524516 USP32Q8NFA0 1604 aa13.02□□□□□ -0.32
PUM1-213ENST00000524516 CHD4Q14839 1912 aa13.02□□□□□ -0.32
PUM1-213ENST00000524516 HAP1P54257 671 aaPredicted RBP13.02□□□□□ -0.33
PUM1-213ENST00000524516 XPCQ01831 940 aaPredicted RBP13.01□□□□□ -0.33
PUM1-213ENST00000524516 PLCH1Q4KWH8 1693 aa13□□□□□ -0.33
PUM1-213ENST00000524516 PARD3Q8TEW0 1356 aa13□□□□□ -0.33
PUM1-213ENST00000524516 FAM98CQ17RN3 349 aaKnown RBP13□□□□□ -0.33
PUM1-213ENST00000524516 CAMKK2Q96RR4 588 aa13□□□□□ -0.33
PUM1-213ENST00000524516 PXDNQ92626 1479 aa12.99□□□□□ -0.33
PUM1-213ENST00000524516 CAPN15O75808 1086 aa12.99□□□□□ -0.33
PUM1-213ENST00000524516 NUP188Q5SRE5 1749 aa12.99□□□□□ -0.33
PUM1-213ENST00000524516 RREB1Q92766 1687 aa12.99□□□□□ -0.33
PUM1-213ENST00000524516 ADGRL2O95490 1459 aa12.98□□□□□ -0.33
PUM1-213ENST00000524516 NWD2Q9ULI1 1742 aa12.98□□□□□ -0.33
PUM1-213ENST00000524516 NRKQ7Z2Y5 1582 aa12.98□□□□□ -0.33
PUM1-213ENST00000524516 TRIM37O94972 964 aa12.97□□□□□ -0.33
PUM1-213ENST00000524516 APBA3O96018 575 aa12.97□□□□□ -0.33
PUM1-213ENST00000524516 METP08581 1390 aa12.96□□□□□ -0.33
PUM1-213ENST00000524516 NRXN3Q9Y4C0 1643 aa12.96□□□□□ -0.33
PUM1-213ENST00000524516 ESCO1Q5FWF5 840 aa12.96□□□□□ -0.33
PUM1-213ENST00000524516 MYOM3Q5VTT5 1437 aa12.96□□□□□ -0.34
PUM1-213ENST00000524516 CROCC2H7BZ55 1655 aa12.96□□□□□ -0.34
PUM1-213ENST00000524516 FOXO3O43524 673 aa12.95□□□□□ -0.34
PUM1-213ENST00000524516 PLEKHG5O94827 1062 aa12.94□□□□□ -0.34
PUM1-213ENST00000524516 UTRNP46939 3433 aa12.94□□□□□ -0.34
PUM1-213ENST00000524516 LRPPRCP42704 1394 aaKnown RBP12.94□□□□□ -0.34
PUM1-213ENST00000524516 MYOM1P52179 1685 aa12.93□□□□□ -0.34
PUM1-213ENST00000524516 SLC34A2O95436 690 aa12.91□□□□□ -0.34
PUM1-213ENST00000524516 FAM196AQ6ZSG2 479 aa12.9□□□□□ -0.34
PUM1-213ENST00000524516 SPATA31A3Q5VYP0 1347 aa12.89□□□□□ -0.35
PUM1-213ENST00000524516 FAM83GA6ND36 823 aa12.88□□□□□ -0.35
PUM1-213ENST00000524516 CABLES1Q8TDN4 633 aa12.88□□□□□ -0.35
PUM1-213ENST00000524516 SYT17Q9BSW7 474 aa12.88□□□□□ -0.35
PUM1-213ENST00000524516 FHDC1Q9C0D6 1143 aaPredicted RBP12.88□□□□□ -0.35
PUM1-213ENST00000524516 NRAPQ86VF7 1730 aa12.88□□□□□ -0.35
PUM1-213ENST00000524516 IQGAP3Q86VI3 1631 aa12.88□□□□□ -0.35
PUM1-213ENST00000524516 DLC1Q96QB1 1528 aa12.88□□□□□ -0.35
PUM1-213ENST00000524516 THSD7AQ9UPZ6 1657 aa12.87□□□□□ -0.35
PUM1-213ENST00000524516 ZBTB7AO95365 584 aa12.86□□□□□ -0.35
PUM1-213ENST00000524516 HSPA6P17066 643 aa12.86□□□□□ -0.35
PUM1-213ENST00000524516 CASZ1Q86V15 1759 aa12.86□□□□□ -0.35
PUM1-213ENST00000524516 ABCC5O15440 1437 aa12.86□□□□□ -0.35
PUM1-213ENST00000524516 ANKRD30AQ9BXX3 1397 aa12.85□□□□□ -0.35
PUM1-213ENST00000524516 ROBO2Q9HCK4 1378 aa12.85□□□□□ -0.35
PUM1-213ENST00000524516 ZNF326Q5BKZ1 582 aaKnown RBP12.85□□□□□ -0.35
PUM1-213ENST00000524516 CCDC144AA2RUR9 1427 aa12.85□□□□□ -0.35
PUM1-213ENST00000524516 CDC42BPGQ6DT37 1551 aa12.85□□□□□ -0.35
PUM1-213ENST00000524516 ABCA3Q99758 1704 aa12.85□□□□□ -0.35
PUM1-213ENST00000524516 SHANK3Q9BYB0 1731 aa12.85□□□□□ -0.35
PUM1-213ENST00000524516 NEXMIFQ5QGS0 1516 aa12.84□□□□□ -0.35
PUM1-213ENST00000524516 GPR162Q16538 588 aa12.84□□□□□ -0.35
PUM1-213ENST00000524516 BTG4Q9NY30 223 aa12.84□□□□□ -0.35
PUM1-213ENST00000524516 ATF5Q9Y2D1 282 aaPredicted RBP12.84□□□□□ -0.35
PUM1-213ENST00000524516 DAPK1P53355 1430 aa12.83□□□□□ -0.36
PUM1-213ENST00000524516 TNS3Q68CZ2 1445 aa12.83□□□□□ -0.36
PUM1-213ENST00000524516 NUTM2FA1L443 756 aa12.83□□□□□ -0.36
PUM1-213ENST00000524516 LMOD2Q6P5Q4 547 aa12.83□□□□□ -0.36
PUM1-213ENST00000524516 CHIC2Q9UKJ5 165 aa12.83□□□□□ -0.36
PUM1-213ENST00000524516 PTGER2P43116 358 aa12.82□□□□□ -0.36
PUM1-213ENST00000524516 SPATA31A5Q5VU36 1347 aa12.82□□□□□ -0.36
PUM1-213ENST00000524516 SPATA31A7Q8IWB4 1347 aa12.82□□□□□ -0.36
PUM1-213ENST00000524516 HFM1A2PYH4 1435 aa12.81□□□□□ -0.36
PUM1-213ENST00000524516 E9PCH4 1651 aa12.81□□□□□ -0.36
PUM1-213ENST00000524516 KIF1AQ12756 1690 aa12.81□□□□□ -0.36
PUM1-213ENST00000524516 PRELPP51888 382 aa12.81□□□□□ -0.36
PUM1-213ENST00000524516 KRT28Q7Z3Y7 464 aa12.81□□□□□ -0.36
PUM1-213ENST00000524516 PELP1Q8IZL8 1130 aaKnown RBP12.8□□□□□ -0.36
PUM1-213ENST00000524516 TNS4Q8IZW8 715 aa12.79□□□□□ -0.36
PUM1-213ENST00000524516 PDGFDQ9GZP0 370 aaPredicted RBP12.79□□□□□ -0.36
PUM1-213ENST00000524516 PCDH10Q9P2E7 1040 aa12.79□□□□□ -0.36
PUM1-213ENST00000524516 COL14A1Q05707 1796 aaKnown RBP12.79□□□□□ -0.36
PUM1-213ENST00000524516 COL13A1Q5TAT6 717 aaPredicted RBP12.78□□□□□ -0.36
PUM1-213ENST00000524516 ANO8Q9HCE9 1232 aaPredicted RBP12.78□□□□□ -0.36
PUM1-213ENST00000524516 PSME1Q06323 249 aa12.77□□□□□ -0.37
PUM1-213ENST00000524516 PDE3BQ13370 1112 aa12.77□□□□□ -0.37
PUM1-213ENST00000524516 ARHGEF10O15013 1369 aa12.76□□□□□ -0.37
PUM1-213ENST00000524516 RRBP1Q9P2E9 1410 aaKnown RBP12.76□□□□□ -0.37
PUM1-213ENST00000524516 NAIPQ13075 1403 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms