RNA–Protein interactions for RNA: ENST00000524429.2

NECTIN1-204, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 2

Gene NECTIN1, Length 777 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-204ENST00000524429 GSE1Q14687 1217 aa11.77□□□□□ -0.53
NECTIN1-204ENST00000524429 GTF3C3Q9Y5Q9 886 aa11.77□□□□□ -0.53
NECTIN1-204ENST00000524429 CAMSAP1Q5T5Y3 1602 aa11.77□□□□□ -0.53
NECTIN1-204ENST00000524429 SPHKAPQ2M3C7 1700 aa11.77□□□□□ -0.53
NECTIN1-204ENST00000524429 STRCQ7RTU9 1775 aa11.77□□□□□ -0.53
NECTIN1-204ENST00000524429 EFCAB6Q5THR3 1501 aa11.76□□□□□ -0.53
NECTIN1-204ENST00000524429 MROH2AA6NES4 1674 aa11.76□□□□□ -0.53
NECTIN1-204ENST00000524429 CEBPAP49715 358 aaPredicted RBP11.76□□□□□ -0.53
NECTIN1-204ENST00000524429 FER1L4A9Z1Z3 1794 aa11.76□□□□□ -0.53
NECTIN1-204ENST00000524429 CHGAP10645 457 aaKnown RBP11.75□□□□□ -0.53
NECTIN1-204ENST00000524429 ZNF467Q7Z7K2 595 aaPredicted RBP11.75□□□□□ -0.53
NECTIN1-204ENST00000524429 MYT1LQ9UL68 1186 aa11.75□□□□□ -0.53
NECTIN1-204ENST00000524429 NUP155O75694 1391 aa11.75□□□□□ -0.53
NECTIN1-204ENST00000524429 RPRD2Q5VT52 1461 aaKnown RBP11.75□□□□□ -0.53
NECTIN1-204ENST00000524429 PREX1Q8TCU6 1659 aa11.75□□□□□ -0.53
NECTIN1-204ENST00000524429 GOLGA2Q08379 1002 aa11.74□□□□□ -0.53
NECTIN1-204ENST00000524429 KANK1Q14678 1352 aa11.74□□□□□ -0.53
NECTIN1-204ENST00000524429 ABCC3O15438 1527 aa11.74□□□□□ -0.53
NECTIN1-204ENST00000524429 MPHOSPH9Q99550 1183 aa11.72□□□□□ -0.53
NECTIN1-204ENST00000524429 DAXXQ9UER7 740 aaPredicted RBP11.72□□□□□ -0.53
NECTIN1-204ENST00000524429 CLTCQ00610 1675 aaKnown RBP11.71□□□□□ -0.53
NECTIN1-204ENST00000524429 KIF3BO15066 747 aa11.71□□□□□ -0.53
NECTIN1-204ENST00000524429 CCER1Q8TC90 406 aaPredicted RBP11.71□□□□□ -0.53
NECTIN1-204ENST00000524429 LTBP4Q8N2S1 1624 aa11.71□□□□□ -0.54
NECTIN1-204ENST00000524429 ARHGAP31Q2M1Z3 1444 aa11.7□□□□□ -0.54
NECTIN1-204ENST00000524429 TRIM52Q96A61 297 aa11.7□□□□□ -0.54
NECTIN1-204ENST00000524429 NEURL4Q96JN8 1562 aa11.7□□□□□ -0.54
NECTIN1-204ENST00000524429 TRPM2O94759 1503 aa11.7□□□□□ -0.54
NECTIN1-204ENST00000524429 PTPRTO14522 1441 aa11.69□□□□□ -0.54
NECTIN1-204ENST00000524429 CFAP65Q6ZU64 1925 aaKnown RBP11.69□□□□□ -0.54
NECTIN1-204ENST00000524429 MKRN3Q13064 507 aaKnown RBP11.69□□□□□ -0.54
NECTIN1-204ENST00000524429 UHRF1BP1Q6BDS2 1440 aa11.69□□□□□ -0.54
NECTIN1-204ENST00000524429 ANKRD30BQ9BXX2 1392 aa11.68□□□□□ -0.54
NECTIN1-204ENST00000524429 KIF1BO60333 1816 aa11.68□□□□□ -0.54
NECTIN1-204ENST00000524429 PIK3C2BO00750 1634 aa11.68□□□□□ -0.54
NECTIN1-204ENST00000524429 C3orf67Q6ZVT6 689 aa11.67□□□□□ -0.54
NECTIN1-204ENST00000524429 IQSEC2Q5JU85 1478 aa11.67□□□□□ -0.54
NECTIN1-204ENST00000524429 CNTLNQ9NXG0 1405 aa11.67□□□□□ -0.54
NECTIN1-204ENST00000524429 ZEB1P37275 1124 aaPredicted RBP11.66□□□□□ -0.54
NECTIN1-204ENST00000524429 EMP3P54852 163 aa11.66□□□□□ -0.54
NECTIN1-204ENST00000524429 NPATQ14207 1427 aa11.65□□□□□ -0.54
NECTIN1-204ENST00000524429 KDM5AP29375 1690 aaKnown RBP11.65□□□□□ -0.55
NECTIN1-204ENST00000524429 CHRM1P11229 460 aaPredicted RBP11.64□□□□□ -0.55
NECTIN1-204ENST00000524429 PDCD7Q8N8D1 485 aaKnown RBP11.64□□□□□ -0.55
NECTIN1-204ENST00000524429 L3MBTL3Q96JM7 780 aaPredicted RBP11.64□□□□□ -0.55
NECTIN1-204ENST00000524429 C3P01024 1663 aa11.64□□□□□ -0.55
NECTIN1-204ENST00000524429 CLTCL1P53675 1640 aa11.64□□□□□ -0.55
NECTIN1-204ENST00000524429 PLA2R1Q13018 1463 aa11.63□□□□□ -0.55
NECTIN1-204ENST00000524429 CIZ1Q9ULV3 898 aaPredicted RBP11.63□□□□□ -0.55
NECTIN1-204ENST00000524429 SYNMO15061 1565 aa11.62□□□□□ -0.55
NECTIN1-204ENST00000524429 WASHC2CQ9Y4E1 1318 aa11.62□□□□□ -0.55
NECTIN1-204ENST00000524429 NOS1P29475 1434 aa11.62□□□□□ -0.55
NECTIN1-204ENST00000524429 UBAP1LF5GYI3 381 aa11.62□□□□□ -0.55
NECTIN1-204ENST00000524429 GGT6Q6P531 493 aa11.62□□□□□ -0.55
NECTIN1-204ENST00000524429 IFT172Q9UG01 1749 aa11.62□□□□□ -0.55
NECTIN1-204ENST00000524429 SETD1BQ9UPS6 1966 aaKnown RBP11.61□□□□□ -0.55
NECTIN1-204ENST00000524429 CCDC144AA2RUR9 1427 aa11.6□□□□□ -0.55
NECTIN1-204ENST00000524429 FAM205CA6NFA0 338 aa11.6□□□□□ -0.55
NECTIN1-204ENST00000524429 PSEN1P49768 467 aa11.6□□□□□ -0.55
NECTIN1-204ENST00000524429 TMEM132AQ24JP5 1023 aa11.6□□□□□ -0.55
NECTIN1-204ENST00000524429 HS6ST3Q8IZP7 471 aa11.6□□□□□ -0.55
NECTIN1-204ENST00000524429 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.6□□□□□ -0.55
NECTIN1-204ENST00000524429 ERVK-7P63135 1459 aa11.59□□□□□ -0.55
NECTIN1-204ENST00000524429 MYO5BQ9ULV0 1848 aa11.59□□□□□ -0.55
NECTIN1-204ENST00000524429 POTEB3A0JP26 581 aa11.59□□□□□ -0.55
NECTIN1-204ENST00000524429 POTEBQ6S5H4 581 aa11.59□□□□□ -0.55
NECTIN1-204ENST00000524429 HS3ST6Q96QI5 342 aa11.59□□□□□ -0.55
NECTIN1-204ENST00000524429 ZNF335Q9H4Z2 1342 aaPredicted RBP11.59□□□□□ -0.55
NECTIN1-204ENST00000524429 ADGRB3O60242 1522 aa11.58□□□□□ -0.56
NECTIN1-204ENST00000524429 PPLO60437 1756 aa11.57□□□□□ -0.56
NECTIN1-204ENST00000524429 MED1Q15648 1581 aaPredicted RBP11.57□□□□□ -0.56
NECTIN1-204ENST00000524429 PDAP1Q13442 181 aaKnown RBP11.56□□□□□ -0.56
NECTIN1-204ENST00000524429 SPATA31E1Q6ZUB1 1445 aa11.56□□□□□ -0.56
NECTIN1-204ENST00000524429 KRTAP3-3Q9BYR6 98 aa11.56□□□□□ -0.56
NECTIN1-204ENST00000524429 KRTAP3-2Q9BYR7 98 aa11.56□□□□□ -0.56
NECTIN1-204ENST00000524429 TMEM131LA2VDJ0 1609 aa11.56□□□□□ -0.56
NECTIN1-204ENST00000524429 ZNF142P52746 1687 aaPredicted RBP11.55□□□□□ -0.56
NECTIN1-204ENST00000524429 NCKAP5LQ9HCH0 1330 aa11.55□□□□□ -0.56
NECTIN1-204ENST00000524429 ZMYM3Q14202 1370 aa11.54□□□□□ -0.56
NECTIN1-204ENST00000524429 UGGT1Q9NYU2 1555 aa11.54□□□□□ -0.56
NECTIN1-204ENST00000524429 HSPA1LP34931 641 aa11.54□□□□□ -0.56
NECTIN1-204ENST00000524429 UBR1Q8IWV7 1749 aa11.54□□□□□ -0.56
NECTIN1-204ENST00000524429 TONSLQ96HA7 1378 aa11.54□□□□□ -0.56
NECTIN1-204ENST00000524429 MYO3AQ8NEV4 1616 aa11.53□□□□□ -0.56
NECTIN1-204ENST00000524429 KIAA1210Q9ULL0 1709 aa11.53□□□□□ -0.56
NECTIN1-204ENST00000524429 SIN3AQ96ST3 1273 aa11.53□□□□□ -0.56
NECTIN1-204ENST00000524429 ESF1Q9H501 851 aaKnown RBP11.53□□□□□ -0.56
NECTIN1-204ENST00000524429 NLRP1Q9C000 1473 aa11.52□□□□□ -0.56
NECTIN1-204ENST00000524429 G3V3G9 751 aa11.52□□□□□ -0.57
NECTIN1-204ENST00000524429 HOMEZQ8IX15 550 aa11.52□□□□□ -0.57
NECTIN1-204ENST00000524429 SLC52A1Q9NWF4 448 aa11.52□□□□□ -0.57
NECTIN1-204ENST00000524429 MYOM2P54296 1465 aa11.51□□□□□ -0.57
NECTIN1-204ENST00000524429 PIP4K2BP78356 416 aa11.5□□□□□ -0.57
NECTIN1-204ENST00000524429 DPY19L2Q6NUT2 758 aa11.5□□□□□ -0.57
NECTIN1-204ENST00000524429 STAC3Q96MF2 364 aa11.5□□□□□ -0.57
NECTIN1-204ENST00000524429 LAMC1P11047 1609 aa11.49□□□□□ -0.57
NECTIN1-204ENST00000524429 TRPM1Q7Z4N2 1603 aa11.49□□□□□ -0.57
NECTIN1-204ENST00000524429 NEUROD1Q13562 356 aa11.48□□□□□ -0.57
NECTIN1-204ENST00000524429 TNRQ92752 1358 aa11.48□□□□□ -0.57
NECTIN1-204ENST00000524429 NEXMIFQ5QGS0 1516 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms