RNA–Protein interactions for RNA: ENST00000524292.5

CTNNA1-242, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-242ENST00000524292 CREBZFQ9NS37 354 aa12.71□□□□□ -0.37
CTNNA1-242ENST00000524292 FBXO3Q9UK99 471 aa12.71□□□□□ -0.37
CTNNA1-242ENST00000524292 NEXMIFQ5QGS0 1516 aa12.71□□□□□ -0.38
CTNNA1-242ENST00000524292 PTPRUQ92729 1446 aa12.71□□□□□ -0.38
CTNNA1-242ENST00000524292 DCCP43146 1447 aa12.7□□□□□ -0.38
CTNNA1-242ENST00000524292 PHLPP1O60346 1717 aa12.69□□□□□ -0.38
CTNNA1-242ENST00000524292 XRN1Q8IZH2 1706 aaKnown RBP12.69□□□□□ -0.38
CTNNA1-242ENST00000524292 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.69□□□□□ -0.38
CTNNA1-242ENST00000524292 VGFO15240 615 aaPredicted RBP12.69□□□□□ -0.38
CTNNA1-242ENST00000524292 RPGRIP1LQ68CZ1 1315 aa12.68□□□□□ -0.38
CTNNA1-242ENST00000524292 METP08581 1390 aa12.68□□□□□ -0.38
CTNNA1-242ENST00000524292 JCADQ9P266 1359 aa12.68□□□□□ -0.38
CTNNA1-242ENST00000524292 ACIN1Q9UKV3 1341 aaKnown RBP12.67□□□□□ -0.38
CTNNA1-242ENST00000524292 CCDC144AA2RUR9 1427 aa12.66□□□□□ -0.38
CTNNA1-242ENST00000524292 ADGRL3Q9HAR2 1447 aa12.64□□□□□ -0.39
CTNNA1-242ENST00000524292 COL16A1Q07092 1604 aaPredicted RBP12.64□□□□□ -0.39
CTNNA1-242ENST00000524292 AHDC1Q5TGY3 1603 aaPredicted RBP12.64□□□□□ -0.39
CTNNA1-242ENST00000524292 BRINP3Q76B58 766 aa12.63□□□□□ -0.39
CTNNA1-242ENST00000524292 MPHOSPH9Q99550 1183 aa12.63□□□□□ -0.39
CTNNA1-242ENST00000524292 FARP1Q9Y4F1 1045 aaPredicted RBP12.63□□□□□ -0.39
CTNNA1-242ENST00000524292 PTCH1Q13635 1447 aa12.62□□□□□ -0.39
CTNNA1-242ENST00000524292 ASXL1Q8IXJ9 1541 aa12.62□□□□□ -0.39
CTNNA1-242ENST00000524292 SPATA31A6Q5VVP1 1343 aa12.62□□□□□ -0.39
CTNNA1-242ENST00000524292 PPLO60437 1756 aa12.61□□□□□ -0.39
CTNNA1-242ENST00000524292 RGS17Q9UGC6 210 aaPredicted RBP12.61□□□□□ -0.39
CTNNA1-242ENST00000524292 MST1RQ04912 1400 aa12.61□□□□□ -0.39
CTNNA1-242ENST00000524292 ANKRD30BQ9BXX2 1392 aa12.6□□□□□ -0.39
CTNNA1-242ENST00000524292 PLEKHG5O94827 1062 aa12.6□□□□□ -0.39
CTNNA1-242ENST00000524292 MEX3CQ5U5Q3 659 aaKnown RBP12.6□□□□□ -0.39
CTNNA1-242ENST00000524292 PRAG1Q86YV5 1406 aa12.6□□□□□ -0.39
CTNNA1-242ENST00000524292 SETD5Q9C0A6 1442 aa12.6□□□□□ -0.39
CTNNA1-242ENST00000524292 SETD1AO15047 1707 aaKnown RBP12.59□□□□□ -0.39
CTNNA1-242ENST00000524292 NALCNQ8IZF0 1738 aa12.59□□□□□ -0.39
CTNNA1-242ENST00000524292 RGL3Q3MIN7 710 aa12.59□□□□□ -0.39
CTNNA1-242ENST00000524292 MIER1Q8N108 512 aa12.59□□□□□ -0.39
CTNNA1-242ENST00000524292 ROBO2Q9HCK4 1378 aa12.58□□□□□ -0.4
CTNNA1-242ENST00000524292 SHPRHQ149N8 1683 aa12.58□□□□□ -0.4
CTNNA1-242ENST00000524292 SPATA31E1Q6ZUB1 1445 aa12.58□□□□□ -0.4
CTNNA1-242ENST00000524292 PLCD3Q8N3E9 789 aa12.58□□□□□ -0.4
CTNNA1-242ENST00000524292 HAX1O00165 279 aa12.57□□□□□ -0.4
CTNNA1-242ENST00000524292 POTEAQ6S8J7 498 aa12.56□□□□□ -0.4
CTNNA1-242ENST00000524292 ADGRF5Q8IZF2 1346 aa12.56□□□□□ -0.4
CTNNA1-242ENST00000524292 LRP6O75581 1613 aa12.55□□□□□ -0.4
CTNNA1-242ENST00000524292 NHSL1Q5SYE7 1610 aa12.55□□□□□ -0.4
CTNNA1-242ENST00000524292 C1orf167Q5SNV9 1468 aa12.55□□□□□ -0.4
CTNNA1-242ENST00000524292 LRRC59Q96AG4 307 aaKnown RBP12.55□□□□□ -0.4
CTNNA1-242ENST00000524292 RAB3GAP2Q9H2M9 1393 aa12.55□□□□□ -0.4
CTNNA1-242ENST00000524292 MNX1P50219 401 aaPredicted RBP12.54□□□□□ -0.4
CTNNA1-242ENST00000524292 VASPP50552 380 aaPredicted RBP12.54□□□□□ -0.4
CTNNA1-242ENST00000524292 ZNF772Q68DY9 489 aaPredicted RBP12.54□□□□□ -0.4
CTNNA1-242ENST00000524292 IFT172Q9UG01 1749 aa12.54□□□□□ -0.4
CTNNA1-242ENST00000524292 PIK3C2GO75747 1445 aa12.54□□□□□ -0.4
CTNNA1-242ENST00000524292 NUTM2BA6NNL0 878 aaPredicted RBP12.53□□□□□ -0.4
CTNNA1-242ENST00000524292 NUTM2EB1AL46 878 aaPredicted RBP12.53□□□□□ -0.4
CTNNA1-242ENST00000524292 NUTM2AQ8IVF1 878 aaPredicted RBP12.53□□□□□ -0.4
CTNNA1-242ENST00000524292 LRPPRCP42704 1394 aaKnown RBP12.53□□□□□ -0.4
CTNNA1-242ENST00000524292 STK26Q9P289 416 aa12.52□□□□□ -0.41
CTNNA1-242ENST00000524292 TECPR2O15040 1411 aa12.52□□□□□ -0.41
CTNNA1-242ENST00000524292 CDC42BPGQ6DT37 1551 aa12.52□□□□□ -0.41
CTNNA1-242ENST00000524292 C19orf67A6NJJ6 358 aa12.51□□□□□ -0.41
CTNNA1-242ENST00000524292 DDX17Q92841 729 aaKnown RBP12.51□□□□□ -0.41
CTNNA1-242ENST00000524292 PNPLA6Q8IY17 1366 aa12.5□□□□□ -0.41
CTNNA1-242ENST00000524292 ABCC11Q96J66 1382 aa12.5□□□□□ -0.41
CTNNA1-242ENST00000524292 MYOM2P54296 1465 aa12.5□□□□□ -0.41
CTNNA1-242ENST00000524292 KNDC1Q76NI1 1749 aa12.49□□□□□ -0.41
CTNNA1-242ENST00000524292 LAMC1P11047 1609 aa12.49□□□□□ -0.41
CTNNA1-242ENST00000524292 TMEM132EQ6IEE7 984 aa12.49□□□□□ -0.41
CTNNA1-242ENST00000524292 ORAI2Q96SN7 254 aa12.49□□□□□ -0.41
CTNNA1-242ENST00000524292 YTHDC2Q9H6S0 1430 aaKnown RBP12.48□□□□□ -0.41
CTNNA1-242ENST00000524292 NPHP3Q7Z494 1330 aa12.48□□□□□ -0.41
CTNNA1-242ENST00000524292 ESCO1Q5FWF5 840 aa12.48□□□□□ -0.41
CTNNA1-242ENST00000524292 NRXN1Q9ULB1 1477 aa12.47□□□□□ -0.41
CTNNA1-242ENST00000524292 DHX57Q6P158 1386 aaKnown RBP12.47□□□□□ -0.41
CTNNA1-242ENST00000524292 AFF2P51816 1311 aa12.47□□□□□ -0.41
CTNNA1-242ENST00000524292 SOS2Q07890 1332 aaPredicted RBP12.47□□□□□ -0.41
CTNNA1-242ENST00000524292 WAPLQ7Z5K2 1190 aa12.47□□□□□ -0.41
CTNNA1-242ENST00000524292 ZBTB47Q9UFB7 747 aaPredicted RBP12.47□□□□□ -0.41
CTNNA1-242ENST00000524292 C8orf37Q96NL8 207 aa12.46□□□□□ -0.41
CTNNA1-242ENST00000524292 C14orf93Q9H972 538 aaKnown RBP12.46□□□□□ -0.41
CTNNA1-242ENST00000524292 HRCP23327 699 aa12.45□□□□□ -0.42
CTNNA1-242ENST00000524292 RXRBP28702 533 aa12.45□□□□□ -0.42
CTNNA1-242ENST00000524292 SIRT1Q96EB6 747 aa12.45□□□□□ -0.42
CTNNA1-242ENST00000524292 PLEKHH1Q9ULM0 1364 aa12.44□□□□□ -0.42
CTNNA1-242ENST00000524292 ADAMTS2O95450 1211 aa12.44□□□□□ -0.42
CTNNA1-242ENST00000524292 CD44P16070 742 aaKnown RBP12.44□□□□□ -0.42
CTNNA1-242ENST00000524292 CFAP70Q5T0N1 1121 aa12.44□□□□□ -0.42
CTNNA1-242ENST00000524292 NUTM2FA1L443 756 aa12.43□□□□□ -0.42
CTNNA1-242ENST00000524292 FOXO3O43524 673 aa12.43□□□□□ -0.42
CTNNA1-242ENST00000524292 NGLY1Q96IV0 654 aa12.43□□□□□ -0.42
CTNNA1-242ENST00000524292 PXDNQ92626 1479 aa12.42□□□□□ -0.42
CTNNA1-242ENST00000524292 CDK12Q9NYV4 1490 aaPredicted RBP12.42□□□□□ -0.42
CTNNA1-242ENST00000524292 STAC3Q96MF2 364 aa12.42□□□□□ -0.42
CTNNA1-242ENST00000524292 FMN2Q9NZ56 1722 aa12.42□□□□□ -0.42
CTNNA1-242ENST00000524292 KIF1AQ12756 1690 aa12.42□□□□□ -0.42
CTNNA1-242ENST00000524292 COL22A1Q8NFW1 1626 aaPredicted RBP12.41□□□□□ -0.42
CTNNA1-242ENST00000524292 XPCQ01831 940 aaPredicted RBP12.41□□□□□ -0.42
CTNNA1-242ENST00000524292 EVX2Q03828 476 aa12.41□□□□□ -0.42
CTNNA1-242ENST00000524292 DCAF11Q8TEB1 546 aa12.41□□□□□ -0.42
CTNNA1-242ENST00000524292 PRAM1Q96QH2 718 aa12.41□□□□□ -0.42
CTNNA1-242ENST00000524292 POGKQ9P215 609 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms