RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 ANKRD23Q86SG2 305 aa8.3□□□□□ -1.08
SDC2-208ENST00000523877 GOLGA6AQ9NYA3 693 aa8.3□□□□□ -1.08
SDC2-208ENST00000523877 RPS6KL1Q9Y6S9 549 aa8.3□□□□□ -1.08
SDC2-208ENST00000523877 EIF4G1Q04637 1599 aaKnown RBP8.3□□□□□ -1.08
SDC2-208ENST00000523877 MYO15BQ96JP2 1530 aa8.29□□□□□ -1.08
SDC2-208ENST00000523877 RGL2O15211 777 aa8.29□□□□□ -1.08
SDC2-208ENST00000523877 SH3BP5O60239 455 aa8.29□□□□□ -1.08
SDC2-208ENST00000523877 ZRSR2Q15696 482 aaKnown RBP8.29□□□□□ -1.08
SDC2-208ENST00000523877 CACTIN-AS1Q8N1I8 211 aa8.29□□□□□ -1.08
SDC2-208ENST00000523877 HELBQ8NG08 1087 aaPredicted RBP8.29□□□□□ -1.08
SDC2-208ENST00000523877 SNRNP27Q8WVK2 155 aaKnown RBP8.29□□□□□ -1.08
SDC2-208ENST00000523877 DRC1Q96MC2 740 aa8.29□□□□□ -1.08
SDC2-208ENST00000523877 MRVI1Q9Y6F6 885 aa8.29□□□□□ -1.08
SDC2-208ENST00000523877 DHX16O60231 1041 aaKnown RBP8.28□□□□□ -1.08
SDC2-208ENST00000523877 ZNF500O60304 480 aaPredicted RBP8.28□□□□□ -1.08
SDC2-208ENST00000523877 SSFA2P28290 1259 aa8.28□□□□□ -1.08
SDC2-208ENST00000523877 SATB1Q01826 763 aa8.28□□□□□ -1.08
SDC2-208ENST00000523877 MKRN3Q13064 507 aaKnown RBP8.28□□□□□ -1.08
SDC2-208ENST00000523877 SMC5Q8IY18 1101 aa8.28□□□□□ -1.08
SDC2-208ENST00000523877 ARHGEF1Q92888 912 aaKnown RBP8.28□□□□□ -1.08
SDC2-208ENST00000523877 CCDC85AQ96PX6 553 aaPredicted RBP8.28□□□□□ -1.08
SDC2-208ENST00000523877 JADE2Q9NQC1 790 aa8.28□□□□□ -1.08
SDC2-208ENST00000523877 CEP126Q9P2H0 1117 aa8.28□□□□□ -1.08
SDC2-208ENST00000523877 POTEB3A0JP26 581 aa8.27□□□□□ -1.09
SDC2-208ENST00000523877 GOLGA6L3A6NEY3 463 aa8.27□□□□□ -1.09
SDC2-208ENST00000523877 SCP2P22307 547 aa8.27□□□□□ -1.09
SDC2-208ENST00000523877 IRF5Q13568 498 aa8.27□□□□□ -1.09
SDC2-208ENST00000523877 DIEXFQ68CQ4 756 aaKnown RBP8.27□□□□□ -1.09
SDC2-208ENST00000523877 POTEBQ6S5H4 581 aa8.27□□□□□ -1.09
SDC2-208ENST00000523877 C3orf67Q6ZVT6 689 aa8.27□□□□□ -1.09
SDC2-208ENST00000523877 DDX46Q7L014 1031 aaKnown RBP8.27□□□□□ -1.09
SDC2-208ENST00000523877 ILDR1Q86SU0 546 aaPredicted RBP8.27□□□□□ -1.09
SDC2-208ENST00000523877 GPBP1L1Q9HC44 474 aaPredicted RBP8.27□□□□□ -1.09
SDC2-208ENST00000523877 METTL14Q9HCE5 456 aaKnown RBP8.27□□□□□ -1.09
SDC2-208ENST00000523877 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.27□□□□□ -1.092e-6■■□□□ 11.9
SDC2-208ENST00000523877 IGF1RP08069 1367 aa8.26□□□□□ -1.09
SDC2-208ENST00000523877 IRF6O14896 467 aa8.26□□□□□ -1.09
SDC2-208ENST00000523877 TRAK2O60296 914 aa8.26□□□□□ -1.09
SDC2-208ENST00000523877 KIF20AO95235 890 aa8.26□□□□□ -1.09
SDC2-208ENST00000523877 GOLGA2Q08379 1002 aa8.26□□□□□ -1.09
SDC2-208ENST00000523877 ZKSCAN2Q63HK3 967 aa8.26□□□□□ -1.09
SDC2-208ENST00000523877 RETREG2Q8NC44 543 aa8.26□□□□□ -1.09
SDC2-208ENST00000523877 IGSF5Q9NSI5 407 aa8.26□□□□□ -1.09
SDC2-208ENST00000523877 PPFIA4O75335 1185 aa8.25□□□□□ -1.09
SDC2-208ENST00000523877 PPP4R3BQ5MIZ7 849 aa8.25□□□□□ -1.09
SDC2-208ENST00000523877 DPY19L2Q6NUT2 758 aa8.25□□□□□ -1.09
SDC2-208ENST00000523877 ZNF513Q8N8E2 541 aaPredicted RBP8.25□□□□□ -1.09
SDC2-208ENST00000523877 ZC3H15Q8WU90 426 aaKnown RBP8.25□□□□□ -1.09
SDC2-208ENST00000523877 L3MBTL3Q96JM7 780 aaPredicted RBP8.25□□□□□ -1.09
SDC2-208ENST00000523877 EPB41L2O43491 1005 aaKnown RBP8.24□□□□□ -1.09
SDC2-208ENST00000523877 CREB3O43889 395 aa8.24□□□□□ -1.09
SDC2-208ENST00000523877 PEX14O75381 377 aa8.24□□□□□ -1.09
SDC2-208ENST00000523877 TPM2P07951 284 aa8.24□□□□□ -1.09
SDC2-208ENST00000523877 FLIIQ13045 1269 aa8.24□□□□□ -1.09
SDC2-208ENST00000523877 ZCRB1Q8TBF4 217 aaKnown RBP8.24□□□□□ -1.09
SDC2-208ENST00000523877 PAIP2Q9BPZ3 127 aaKnown RBP8.24□□□□□ -1.09
SDC2-208ENST00000523877 PNMA2Q9UL42 364 aa8.24□□□□□ -1.09
SDC2-208ENST00000523877 WASHC2AQ641Q2 1341 aa8.24□□□□□ -1.09
SDC2-208ENST00000523877 VGLL3A8MV65 326 aa8.23□□□□□ -1.09
SDC2-208ENST00000523877 KIF4AO95239 1232 aa8.23□□□□□ -1.09
SDC2-208ENST00000523877 EMP3P54852 163 aa8.23□□□□□ -1.09
SDC2-208ENST00000523877 PDAP1Q13442 181 aaKnown RBP8.23□□□□□ -1.09
SDC2-208ENST00000523877 GET4Q7L5D6 327 aaPredicted RBP8.23□□□□□ -1.09
SDC2-208ENST00000523877 BANK1Q8NDB2 785 aa8.23□□□□□ -1.09
SDC2-208ENST00000523877 ZCCHC6Q5VYS8 1495 aaKnown RBP8.22□□□□□ -1.09
SDC2-208ENST00000523877 CHGAP10645 457 aaKnown RBP8.22□□□□□ -1.09
SDC2-208ENST00000523877 COPB2P35606 906 aa8.22□□□□□ -1.09
SDC2-208ENST00000523877 TSR1Q2NL82 804 aaKnown RBP8.22□□□□□ -1.09
SDC2-208ENST00000523877 CLEC4GQ6UXB4 293 aa8.22□□□□□ -1.09
SDC2-208ENST00000523877 CREBRFQ8IUR6 639 aa8.22□□□□□ -1.09
SDC2-208ENST00000523877 MPNDQ8N594 471 aa8.22□□□□□ -1.09
SDC2-208ENST00000523877 EVI5LQ96CN4 794 aa8.22□□□□□ -1.09
SDC2-208ENST00000523877 SIRT1Q96EB6 747 aa8.22□□□□□ -1.09
SDC2-208ENST00000523877 FAM210AQ96ND0 272 aa8.22□□□□□ -1.09
SDC2-208ENST00000523877 KRTAP3-3Q9BYR6 98 aa8.22□□□□□ -1.09
SDC2-208ENST00000523877 KRTAP3-2Q9BYR7 98 aa8.22□□□□□ -1.09
SDC2-208ENST00000523877 UNCXA6NJT0 531 aa8.21□□□□□ -1.1
SDC2-208ENST00000523877 RAB11FIP3O75154 756 aa8.21□□□□□ -1.1
SDC2-208ENST00000523877 EIF3JO75822 258 aaKnown RBP8.21□□□□□ -1.1
SDC2-208ENST00000523877 MAP4K4O95819 1239 aaPredicted RBP8.21□□□□□ -1.1
SDC2-208ENST00000523877 KCNA1Q09470 495 aa8.21□□□□□ -1.1
SDC2-208ENST00000523877 CCDC97Q96F63 343 aaPredicted RBP8.21□□□□□ -1.1
SDC2-208ENST00000523877 HS3ST6Q96QI5 342 aa8.21□□□□□ -1.1
SDC2-208ENST00000523877 COMMD10Q9Y6G5 202 aa8.21□□□□□ -1.1
SDC2-208ENST00000523877 A6NJR5 290 aa8.2□□□□□ -1.1
SDC2-208ENST00000523877 RHBDL3P58872 404 aa8.2□□□□□ -1.1
SDC2-208ENST00000523877 LMOD3Q0VAK6 560 aa8.2□□□□□ -1.1
SDC2-208ENST00000523877 PUS10Q3MIT2 529 aaKnown RBP8.2□□□□□ -1.1
SDC2-208ENST00000523877 MTERF4Q7Z6M4 381 aaKnown RBP8.2□□□□□ -1.1
SDC2-208ENST00000523877 SREK1Q8WXA9 508 aaKnown RBP8.2□□□□□ -1.1
SDC2-208ENST00000523877 SERPINA10Q9UK55 444 aa8.2□□□□□ -1.1
SDC2-208ENST00000523877 SYNPO2Q9UMS6 1093 aa8.2□□□□□ -1.1
SDC2-208ENST00000523877 FAM205CA6NFA0 338 aa8.19□□□□□ -1.1
SDC2-208ENST00000523877 FOSBP53539 338 aa8.19□□□□□ -1.1
SDC2-208ENST00000523877 MAF1Q9H063 256 aa8.19□□□□□ -1.1
SDC2-208ENST00000523877 TMX4Q9H1E5 349 aaPredicted RBP8.19□□□□□ -1.1
SDC2-208ENST00000523877 ARHGEF10LQ9HCE6 1279 aa8.19□□□□□ -1.1
SDC2-208ENST00000523877 CABP2Q9NPB3 220 aa8.19□□□□□ -1.1
SDC2-208ENST00000523877 ABCF2Q9UG63 623 aa8.19□□□□□ -1.1
SDC2-208ENST00000523877 PAX3P23760 479 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms