RNA–Protein interactions for RNA: ENST00000523851.1

SREK1-214, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 3

Gene SREK1, Length 458 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-214ENST00000523851 C8orf37Q96NL8 207 aa24.18■■□□□ 1.46
SREK1-214ENST00000523851 CDK12Q9NYV4 1490 aaPredicted RBP24.17■■□□□ 1.46
SREK1-214ENST00000523851 UPF1Q92900 1129 aaKnown RBP eCLIP24.16■■□□□ 1.46
SREK1-214ENST00000523851 STK26Q9P289 416 aa24.16■■□□□ 1.46
SREK1-214ENST00000523851 TECPR2O15040 1411 aa24.16■■□□□ 1.46
SREK1-214ENST00000523851 CDC42BPGQ6DT37 1551 aa24.16■■□□□ 1.46
SREK1-214ENST00000523851 WAPLQ7Z5K2 1190 aa24.15■■□□□ 1.46
SREK1-214ENST00000523851 TMEM132EQ6IEE7 984 aa24.14■■□□□ 1.45
SREK1-214ENST00000523851 QTRT2Q9H974 415 aaKnown RBP24.14■■□□□ 1.45
SREK1-214ENST00000523851 LRPPRCP42704 1394 aaKnown RBP24.14■■□□□ 1.45
SREK1-214ENST00000523851 PIK3C2GO75747 1445 aa24.13■■□□□ 1.45
SREK1-214ENST00000523851 ADAMTS2O95450 1211 aa24.13■■□□□ 1.45
SREK1-214ENST00000523851 ESCO1Q5FWF5 840 aa24.13■■□□□ 1.45
SREK1-214ENST00000523851 ABCC11Q96J66 1382 aa24.13■■□□□ 1.45
SREK1-214ENST00000523851 KNDC1Q76NI1 1749 aa24.12■■□□□ 1.45
SREK1-214ENST00000523851 NGLY1Q96IV0 654 aa24.11■■□□□ 1.45
SREK1-214ENST00000523851 COL22A1Q8NFW1 1626 aaPredicted RBP24.1■■□□□ 1.45
SREK1-214ENST00000523851 RBM6P78332 1123 aaKnown RBP24.1■■□□□ 1.45
SREK1-214ENST00000523851 PLEKHH1Q9ULM0 1364 aa24.09■■□□□ 1.45
SREK1-214ENST00000523851 NPHP3Q7Z494 1330 aa24.09■■□□□ 1.45
SREK1-214ENST00000523851 PXDNQ92626 1479 aa24.07■■□□□ 1.44
SREK1-214ENST00000523851 FOXO3O43524 673 aa24.07■■□□□ 1.44
SREK1-214ENST00000523851 C14orf93Q9H972 538 aaKnown RBP24.07■■□□□ 1.44
SREK1-214ENST00000523851 YTHDC2Q9H6S0 1430 aaKnown RBP24.07■■□□□ 1.44
SREK1-214ENST00000523851 NUTM2FA1L443 756 aa24.06■■□□□ 1.44
SREK1-214ENST00000523851 RGS12O14924 1447 aa24.05■■□□□ 1.44
SREK1-214ENST00000523851 SIRT1Q96EB6 747 aa24.05■■□□□ 1.44
SREK1-214ENST00000523851 FNBP4Q8N3X1 1017 aaPredicted RBP24.04■■□□□ 1.44
SREK1-214ENST00000523851 NRXN1Q9ULB1 1477 aa24.04■■□□□ 1.44
SREK1-214ENST00000523851 FMN2Q9NZ56 1722 aa24.04■■□□□ 1.44
SREK1-214ENST00000523851 XPCQ01831 940 aaPredicted RBP24.03■■□□□ 1.44
SREK1-214ENST00000523851 USP21Q9UK80 565 aa24.03■■□□□ 1.44
SREK1-214ENST00000523851 MYOM2P54296 1465 aa24.02■■□□□ 1.44
SREK1-214ENST00000523851 CFAP70Q5T0N1 1121 aa24.02■■□□□ 1.44
SREK1-214ENST00000523851 MARF1Q9Y4F3 1742 aaKnown RBP23.99■■□□□ 1.43
SREK1-214ENST00000523851 TRPC5Q9UL62 973 aaPredicted RBP23.99■■□□□ 1.43
SREK1-214ENST00000523851 DHX57Q6P158 1386 aaKnown RBP23.99■■□□□ 1.43
SREK1-214ENST00000523851 RGPD8O14715 1765 aaPredicted RBP23.97■■□□□ 1.43
SREK1-214ENST00000523851 KIF1AQ12756 1690 aa23.97■■□□□ 1.43
SREK1-214ENST00000523851 ATRNO75882 1429 aa23.96■■□□□ 1.43
SREK1-214ENST00000523851 BCL9LQ86UU0 1499 aa23.95■■□□□ 1.42
SREK1-214ENST00000523851 STAC3Q96MF2 364 aa23.95■■□□□ 1.42
SREK1-214ENST00000523851 SPATA31A3Q5VYP0 1347 aa23.94■■□□□ 1.42
SREK1-214ENST00000523851 KRT28Q7Z3Y7 464 aa23.93■■□□□ 1.42
SREK1-214ENST00000523851 PRAM1Q96QH2 718 aa23.93■■□□□ 1.42
SREK1-214ENST00000523851 PHF8Q9UPP1 1060 aa23.91■■□□□ 1.42
SREK1-214ENST00000523851 SAFB2Q14151 953 aaKnown RBP eCLIP23.9■■□□□ 1.42
SREK1-214ENST00000523851 DLC1Q96QB1 1528 aa23.89■■□□□ 1.42
SREK1-214ENST00000523851 ADGRB1O14514 1584 aa23.88■■□□□ 1.41
SREK1-214ENST00000523851 ATAD2Q6PL18 1390 aa23.87■■□□□ 1.41
SREK1-214ENST00000523851 PSME1Q06323 249 aa23.86■■□□□ 1.41
SREK1-214ENST00000523851 GJD4Q96KN9 370 aaPredicted RBP23.86■■□□□ 1.41
SREK1-214ENST00000523851 POGKQ9P215 609 aa23.86■■□□□ 1.41
SREK1-214ENST00000523851 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.86■■□□□ 1.41
SREK1-214ENST00000523851 USP32Q8NFA0 1604 aa23.85■■□□□ 1.41
SREK1-214ENST00000523851 KDM2AQ9Y2K7 1162 aa23.85■■□□□ 1.41
SREK1-214ENST00000523851 TNS3Q68CZ2 1445 aa23.84■■□□□ 1.41
SREK1-214ENST00000523851 SLIT2O94813 1529 aa23.84■■□□□ 1.41
SREK1-214ENST00000523851 DCAF11Q8TEB1 546 aa23.84■■□□□ 1.41
SREK1-214ENST00000523851 ADGRB2O60241 1585 aa23.83■■□□□ 1.41
SREK1-214ENST00000523851 UNC5CLQ8IV45 518 aa23.83■■□□□ 1.41
SREK1-214ENST00000523851 TRAK1Q9UPV9 953 aa23.83■■□□□ 1.41
SREK1-214ENST00000523851 SBNO1A3KN83 1393 aa23.82■■□□□ 1.4
SREK1-214ENST00000523851 ANKARQ7Z5J8 1434 aa23.82■■□□□ 1.4
SREK1-214ENST00000523851 PMFBP1Q8TBY8 1022 aa23.81■■□□□ 1.4
SREK1-214ENST00000523851 CABLES1Q8TDN4 633 aa23.81■■□□□ 1.4
SREK1-214ENST00000523851 HIRIP3Q9BW71 556 aaPredicted RBP23.79■■□□□ 1.4
SREK1-214ENST00000523851 GLI3P10071 1580 aa23.78■■□□□ 1.4
SREK1-214ENST00000523851 RALGAPBQ86X10 1494 aa23.77■■□□□ 1.4
SREK1-214ENST00000523851 ABCA3Q99758 1704 aa23.77■■□□□ 1.4
SREK1-214ENST00000523851 MINK1Q8N4C8 1332 aaPredicted RBP23.77■■□□□ 1.4
SREK1-214ENST00000523851 EP400Q96L91 3159 aa23.76■■□□□ 1.39
SREK1-214ENST00000523851 HAP1P54257 671 aaPredicted RBP23.76■■□□□ 1.39
SREK1-214ENST00000523851 LMOD2Q6P5Q4 547 aa23.76■■□□□ 1.39
SREK1-214ENST00000523851 ARHGEF10O15013 1369 aa23.76■■□□□ 1.39
SREK1-214ENST00000523851 PLEKHG5O94827 1062 aa23.75■■□□□ 1.39
SREK1-214ENST00000523851 PRR36Q9H6K5 1346 aa23.75■■□□□ 1.39
SREK1-214ENST00000523851 TRPM3Q9HCF6 1732 aaPredicted RBP23.75■■□□□ 1.39
SREK1-214ENST00000523851 WASLO00401 505 aaPredicted RBP23.74■■□□□ 1.39
SREK1-214ENST00000523851 PLCH1Q4KWH8 1693 aa23.73■■□□□ 1.39
SREK1-214ENST00000523851 NWD2Q9ULI1 1742 aa23.73■■□□□ 1.39
SREK1-214ENST00000523851 CCDC125Q86Z20 511 aa23.73■■□□□ 1.39
SREK1-214ENST00000523851 TULP4Q9NRJ4 1543 aa23.73■■□□□ 1.39
SREK1-214ENST00000523851 BRWD3Q6RI45 1802 aa23.71■■□□□ 1.39
SREK1-214ENST00000523851 EIF3AQ14152 1382 aaKnown RBP23.71■■□□□ 1.39
SREK1-214ENST00000523851 FAM83GA6ND36 823 aa23.71■■□□□ 1.39
SREK1-214ENST00000523851 VPS72Q15906 364 aa23.71■■□□□ 1.39
SREK1-214ENST00000523851 ALS2Q96Q42 1657 aa23.7■■□□□ 1.39
SREK1-214ENST00000523851 ARHGEF28Q8N1W1 1705 aaKnown RBP23.7■■□□□ 1.38
SREK1-214ENST00000523851 GPRASP1Q5JY77 1395 aa23.68■■□□□ 1.38
SREK1-214ENST00000523851 ONECUT3O60422 494 aaPredicted RBP23.68■■□□□ 1.38
SREK1-214ENST00000523851 TRIM26Q12899 539 aaPredicted RBP23.68■■□□□ 1.38
SREK1-214ENST00000523851 SEPT12Q8IYM1 358 aa23.67■■□□□ 1.38
SREK1-214ENST00000523851 NGDNQ8NEJ9 315 aaKnown RBP23.64■■□□□ 1.37
SREK1-214ENST00000523851 CCDC9Q9Y3X0 531 aaKnown RBP23.64■■□□□ 1.37
SREK1-214ENST00000523851 NRAPQ86VF7 1730 aa23.63■■□□□ 1.37
SREK1-214ENST00000523851 NUDT16Q96DE0 195 aaKnown RBP23.63■■□□□ 1.37
SREK1-214ENST00000523851 CRYBG1Q9Y4K1 1723 aa23.62■■□□□ 1.37
SREK1-214ENST00000523851 ATP7BP35670 1465 aa23.62■■□□□ 1.37
SREK1-214ENST00000523851 ITSN1Q15811 1721 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms