RNA–Protein interactions for RNA: ENST00000523765.1

LAMA4-220, Transcript of laminin subunit alpha 4, humanhuman

TSL 5

Gene LAMA4, Length 1,054 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-220ENST00000523765 TRPC5Q9UL62 973 aaPredicted RBP15.21■□□□□ 0.03
LAMA4-220ENST00000523765 BRWD3Q6RI45 1802 aa15.21■□□□□ 0.03
LAMA4-220ENST00000523765 C1orf167Q5SNV9 1468 aa15.2■□□□□ 0.02
LAMA4-220ENST00000523765 BCL9LQ86UU0 1499 aa15.2■□□□□ 0.02
LAMA4-220ENST00000523765 ORAI2Q96SN7 254 aa15.2■□□□□ 0.02
LAMA4-220ENST00000523765 LRP5O75197 1615 aa15.2■□□□□ 0.02
LAMA4-220ENST00000523765 LOC105371045A0A1W2PR82 267 aa15.19■□□□□ 0.02
LAMA4-220ENST00000523765 SOS2Q07890 1332 aaPredicted RBP15.18■□□□□ 0.02
LAMA4-220ENST00000523765 PTCH1Q13635 1447 aa15.18■□□□□ 0.02
LAMA4-220ENST00000523765 IQGAP3Q86VI3 1631 aa15.18■□□□□ 0.02
LAMA4-220ENST00000523765 DEFB132Q7Z7B7 95 aa15.18■□□□□ 0.02
LAMA4-220ENST00000523765 GLI3P10071 1580 aa15.18■□□□□ 0.02
LAMA4-220ENST00000523765 MYOM2P54296 1465 aa15.16■□□□□ 0.02
LAMA4-220ENST00000523765 SPINK5Q9NQ38 1064 aaPredicted RBP15.15■□□□□ 0.02
LAMA4-220ENST00000523765 CCDC125Q86Z20 511 aa15.14■□□□□ 0.01
LAMA4-220ENST00000523765 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.13■□□□□ 0.01
LAMA4-220ENST00000523765 SPHKAPQ2M3C7 1700 aa15.12■□□□□ 0.01
LAMA4-220ENST00000523765 BLMP54132 1417 aaPredicted RBP15.12■□□□□ 0.01
LAMA4-220ENST00000523765 GJD4Q96KN9 370 aaPredicted RBP15.12■□□□□ 0.01
LAMA4-220ENST00000523765 NEXMIFQ5QGS0 1516 aa15.12■□□□□ 0.01
LAMA4-220ENST00000523765 FAM50AQ14320 339 aaKnown RBP15.11■□□□□ 0.01
LAMA4-220ENST00000523765 RALGAPBQ86X10 1494 aa15.11■□□□□ 0.01
LAMA4-220ENST00000523765 PXDNQ92626 1479 aa15.11■□□□□ 0.01
LAMA4-220ENST00000523765 ROBO2Q9HCK4 1378 aa15.11■□□□□ 0.01
LAMA4-220ENST00000523765 PSDA5PKW4 1024 aaPredicted RBP15.1■□□□□ 0.01
LAMA4-220ENST00000523765 XPCQ01831 940 aaPredicted RBP15.09■□□□□ 0.01
LAMA4-220ENST00000523765 CLTCL1P53675 1640 aa15.08■□□□□ 0
LAMA4-220ENST00000523765 ZNF326Q5BKZ1 582 aaKnown RBP15.07■□□□□ 0
LAMA4-220ENST00000523765 SLIT2O94813 1529 aa15.06■□□□□ 0
LAMA4-220ENST00000523765 NUP155O75694 1391 aa15.05■□□□□ -0
LAMA4-220ENST00000523765 HRCP23327 699 aa15.04■□□□□ -0
LAMA4-220ENST00000523765 UNC5CLQ8IV45 518 aa15.03■□□□□ -0
LAMA4-220ENST00000523765 PLCH1Q4KWH8 1693 aa15.03■□□□□ -0
LAMA4-220ENST00000523765 USP32Q8NFA0 1604 aa15.03■□□□□ -0
LAMA4-220ENST00000523765 FOXO3O43524 673 aa15.01□□□□□ -0.01
LAMA4-220ENST00000523765 ESCO1Q5FWF5 840 aa15.01□□□□□ -0.01
LAMA4-220ENST00000523765 SEPT12Q8IYM1 358 aa15.01□□□□□ -0.01
LAMA4-220ENST00000523765 CDC42BPGQ6DT37 1551 aa15□□□□□ -0.01
LAMA4-220ENST00000523765 APLP2Q06481 763 aa15□□□□□ -0.01
LAMA4-220ENST00000523765 KIF1BO60333 1816 aa15□□□□□ -0.01
LAMA4-220ENST00000523765 NPHP3Q7Z494 1330 aa14.99□□□□□ -0.01
LAMA4-220ENST00000523765 NUTM2FA1L443 756 aa14.99□□□□□ -0.01
LAMA4-220ENST00000523765 PRAG1Q86YV5 1406 aa14.99□□□□□ -0.01
LAMA4-220ENST00000523765 ABCA3Q99758 1704 aa14.98□□□□□ -0.01
LAMA4-220ENST00000523765 DSG3P32926 999 aa14.97□□□□□ -0.01
LAMA4-220ENST00000523765 SF3B2Q13435 895 aaKnown RBP14.97□□□□□ -0.01
LAMA4-220ENST00000523765 CAPN15O75808 1086 aa14.96□□□□□ -0.01
LAMA4-220ENST00000523765 ROCK1Q13464 1354 aa14.96□□□□□ -0.02
LAMA4-220ENST00000523765 RGPD8O14715 1765 aaPredicted RBP14.96□□□□□ -0.02
LAMA4-220ENST00000523765 TNS1Q9HBL0 1735 aaKnown RBP14.95□□□□□ -0.02
LAMA4-220ENST00000523765 NWD2Q9ULI1 1742 aa14.95□□□□□ -0.02
LAMA4-220ENST00000523765 HFM1A2PYH4 1435 aa14.95□□□□□ -0.02
LAMA4-220ENST00000523765 PLEKHG5O94827 1062 aa14.95□□□□□ -0.02
LAMA4-220ENST00000523765 R3HDM1Q15032 1099 aaKnown RBP14.95□□□□□ -0.02
LAMA4-220ENST00000523765 KRT27Q7Z3Y8 459 aa14.95□□□□□ -0.02
LAMA4-220ENST00000523765 CABLES1Q8TDN4 633 aa14.95□□□□□ -0.02
LAMA4-220ENST00000523765 PPLO60437 1756 aa14.95□□□□□ -0.02
LAMA4-220ENST00000523765 NRAPQ86VF7 1730 aa14.95□□□□□ -0.02
LAMA4-220ENST00000523765 FMN2Q9NZ56 1722 aa14.95□□□□□ -0.02
LAMA4-220ENST00000523765 SPATA31A3Q5VYP0 1347 aa14.94□□□□□ -0.02
LAMA4-220ENST00000523765 NAIPQ13075 1403 aa14.94□□□□□ -0.02
LAMA4-220ENST00000523765 ONECUT3O60422 494 aaPredicted RBP14.94□□□□□ -0.02
LAMA4-220ENST00000523765 EN1Q05925 392 aaPredicted RBP14.94□□□□□ -0.02
LAMA4-220ENST00000523765 FAM182BQ5T319 152 aa14.94□□□□□ -0.02
LAMA4-220ENST00000523765 FOXD4L1Q9NU39 408 aa14.94□□□□□ -0.02
LAMA4-220ENST00000523765 RGPD1P0DJD0 1748 aa14.94□□□□□ -0.02
LAMA4-220ENST00000523765 VPS72Q15906 364 aa14.93□□□□□ -0.02
LAMA4-220ENST00000523765 PLEKHH1Q9ULM0 1364 aa14.91□□□□□ -0.02
LAMA4-220ENST00000523765 ITGAEP38570 1179 aa14.91□□□□□ -0.02
LAMA4-220ENST00000523765 BAG6P46379 1132 aa14.91□□□□□ -0.02
LAMA4-220ENST00000523765 WAPLQ7Z5K2 1190 aa14.91□□□□□ -0.02
LAMA4-220ENST00000523765 CCDC9Q9Y3X0 531 aaKnown RBP14.9□□□□□ -0.02
LAMA4-220ENST00000523765 KIF1AQ12756 1690 aa14.9□□□□□ -0.02
LAMA4-220ENST00000523765 YY1P25490 414 aa14.89□□□□□ -0.03
LAMA4-220ENST00000523765 FAM98CQ17RN3 349 aaKnown RBP14.88□□□□□ -0.03
LAMA4-220ENST00000523765 KRT28Q7Z3Y7 464 aa14.88□□□□□ -0.03
LAMA4-220ENST00000523765 IFT172Q9UG01 1749 aa14.87□□□□□ -0.03
LAMA4-220ENST00000523765 VGFO15240 615 aaPredicted RBP14.87□□□□□ -0.03
LAMA4-220ENST00000523765 EZH2Q15910 746 aaKnown RBP14.87□□□□□ -0.03
LAMA4-220ENST00000523765 LRPPRCP42704 1394 aaKnown RBP14.86□□□□□ -0.03
LAMA4-220ENST00000523765 CCDC144AA2RUR9 1427 aa14.86□□□□□ -0.03
LAMA4-220ENST00000523765 TNS3Q68CZ2 1445 aa14.86□□□□□ -0.03
LAMA4-220ENST00000523765 A0A0G2JS52 829 aa14.86□□□□□ -0.03
LAMA4-220ENST00000523765 FAM83GA6ND36 823 aa14.86□□□□□ -0.03
LAMA4-220ENST00000523765 MYT1Q01538 1121 aa14.86□□□□□ -0.03
LAMA4-220ENST00000523765 STK26Q9P289 416 aa14.86□□□□□ -0.03
LAMA4-220ENST00000523765 KNDC1Q76NI1 1749 aa14.86□□□□□ -0.03
LAMA4-220ENST00000523765 THSD7AQ9UPZ6 1657 aa14.85□□□□□ -0.03
LAMA4-220ENST00000523765 CAMTA1Q9Y6Y1 1673 aa14.85□□□□□ -0.03
LAMA4-220ENST00000523765 RREB1Q92766 1687 aa14.84□□□□□ -0.03
LAMA4-220ENST00000523765 HAP1P54257 671 aaPredicted RBP14.83□□□□□ -0.04
LAMA4-220ENST00000523765 ADGRF5Q8IZF2 1346 aa14.83□□□□□ -0.04
LAMA4-220ENST00000523765 NUP188Q5SRE5 1749 aa14.83□□□□□ -0.04
LAMA4-220ENST00000523765 DISP2A7MBM2 1401 aa14.83□□□□□ -0.04
LAMA4-220ENST00000523765 TECPR2O15040 1411 aa14.83□□□□□ -0.04
LAMA4-220ENST00000523765 UTRNP46939 3433 aa14.82□□□□□ -0.04
LAMA4-220ENST00000523765 TRPM3Q9HCF6 1732 aaPredicted RBP14.81□□□□□ -0.04
LAMA4-220ENST00000523765 CRYBG1Q9Y4K1 1723 aa14.81□□□□□ -0.04
LAMA4-220ENST00000523765 TMEM132EQ6IEE7 984 aa14.81□□□□□ -0.04
LAMA4-220ENST00000523765 CAMKK2Q96RR4 588 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms