RNA–Protein interactions for RNA: ENST00000523613.5

HMBOX1-210, Transcript of homeobox containing 1, humanhuman

TSL 1 (best) BASIC

Gene HMBOX1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-210ENST00000523613 ROBO2Q9HCK4 1378 aa20.77■□□□□ 0.92
HMBOX1-210ENST00000523613 TULP4Q9NRJ4 1543 aa20.77■□□□□ 0.92
HMBOX1-210ENST00000523613 ANP32CO43423 234 aa20.75■□□□□ 0.91
HMBOX1-210ENST00000523613 PUS7Q96PZ0 661 aaKnown RBP20.75■□□□□ 0.91
HMBOX1-210ENST00000523613 XRN1Q8IZH2 1706 aaKnown RBP20.75■□□□□ 0.91
HMBOX1-210ENST00000523613 PTCH1Q13635 1447 aa20.75■□□□□ 0.91
HMBOX1-210ENST00000523613 SRPK2P78362 688 aaKnown RBP20.72■□□□□ 0.91
HMBOX1-210ENST00000523613 MYOM1P52179 1685 aa20.72■□□□□ 0.91
HMBOX1-210ENST00000523613 CHD2O14647 1828 aaKnown RBP20.71■□□□□ 0.91
HMBOX1-210ENST00000523613 KCNA6P17658 529 aa20.7■□□□□ 0.9
HMBOX1-210ENST00000523613 PANK3Q9H999 370 aa20.7■□□□□ 0.9
HMBOX1-210ENST00000523613 CABP2Q9NPB3 220 aa20.7■□□□□ 0.9
HMBOX1-210ENST00000523613 CDK19Q9BWU1 502 aa20.7■□□□□ 0.9
HMBOX1-210ENST00000523613 ATAD2Q6PL18 1390 aa20.68■□□□□ 0.9
HMBOX1-210ENST00000523613 TMC1Q8TDI8 760 aa20.67■□□□□ 0.9
HMBOX1-210ENST00000523613 ADGRB2O60241 1585 aa20.67■□□□□ 0.9
HMBOX1-210ENST00000523613 WASLO00401 505 aaPredicted RBP20.67■□□□□ 0.9
HMBOX1-210ENST00000523613 NINLQ9Y2I6 1382 aa20.66■□□□□ 0.9
HMBOX1-210ENST00000523613 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.66■□□□□ 0.9
HMBOX1-210ENST00000523613 NWD1Q149M9 1564 aa20.65■□□□□ 0.9
HMBOX1-210ENST00000523613 STRCQ7RTU9 1775 aa20.64■□□□□ 0.89
HMBOX1-210ENST00000523613 SLC12A5Q9H2X9 1139 aa20.63■□□□□ 0.89
HMBOX1-210ENST00000523613 PER1O15534 1290 aaPredicted RBP20.62■□□□□ 0.89
HMBOX1-210ENST00000523613 KNSTRNQ9Y448 316 aa20.61■□□□□ 0.89
HMBOX1-210ENST00000523613 PRKRIP1Q9H875 184 aaPredicted RBP20.61■□□□□ 0.89
HMBOX1-210ENST00000523613 NKTRP30414 1462 aaKnown RBP20.59■□□□□ 0.89
HMBOX1-210ENST00000523613 ANKRD36BQ8N2N9 1353 aa20.58■□□□□ 0.89
HMBOX1-210ENST00000523613 CNGB1Q14028 1251 aaPredicted RBP20.58■□□□□ 0.88
HMBOX1-210ENST00000523613 KTN1Q86UP2 1357 aaKnown RBP20.58■□□□□ 0.88
HMBOX1-210ENST00000523613 NUDT16Q96DE0 195 aaKnown RBP20.57■□□□□ 0.88
HMBOX1-210ENST00000523613 TERF2IPQ9NYB0 399 aa20.57■□□□□ 0.88
HMBOX1-210ENST00000523613 CCER2I3L3R5 266 aa20.56■□□□□ 0.88
HMBOX1-210ENST00000523613 PROSER2Q86WR7 435 aaPredicted RBP20.56■□□□□ 0.88
HMBOX1-210ENST00000523613 CABP1Q9NZU7 370 aa20.56■□□□□ 0.88
HMBOX1-210ENST00000523613 HDGFL2Q7Z4V5 671 aaPredicted RBP20.55■□□□□ 0.88
HMBOX1-210ENST00000523613 CARD14Q9BXL6 1004 aa20.55■□□□□ 0.88
HMBOX1-210ENST00000523613 DMRT2Q9Y5R5 561 aa20.55■□□□□ 0.88
HMBOX1-210ENST00000523613 CCDC61Q9Y6R9 512 aa20.55■□□□□ 0.88
HMBOX1-210ENST00000523613 ATP7BP35670 1465 aa20.55■□□□□ 0.88
HMBOX1-210ENST00000523613 NALCNQ8IZF0 1738 aa20.54■□□□□ 0.88
HMBOX1-210ENST00000523613 PPIP5K1Q6PFW1 1433 aa20.54■□□□□ 0.88
HMBOX1-210ENST00000523613 ADGRL3Q9HAR2 1447 aa20.54■□□□□ 0.88
HMBOX1-210ENST00000523613 RALBP1Q15311 655 aa20.54■□□□□ 0.88
HMBOX1-210ENST00000523613 C14orf37Q86TY3 774 aa20.54■□□□□ 0.88
HMBOX1-210ENST00000523613 NSD3Q9BZ95 1437 aa20.53■□□□□ 0.88
HMBOX1-210ENST00000523613 CC2D1BQ5T0F9 858 aaKnown RBP20.53■□□□□ 0.88
HMBOX1-210ENST00000523613 CDC42BPGQ6DT37 1551 aa20.53■□□□□ 0.88
HMBOX1-210ENST00000523613 A0A1W2PP64 1363 aa20.53■□□□□ 0.88
HMBOX1-210ENST00000523613 PRR36Q9H6K5 1346 aa20.53■□□□□ 0.88
HMBOX1-210ENST00000523613 RBM33Q96EV2 1170 aaKnown RBP20.53■□□□□ 0.88
HMBOX1-210ENST00000523613 NPC1L1Q9UHC9 1359 aa20.52■□□□□ 0.88
HMBOX1-210ENST00000523613 AMER1Q5JTC6 1135 aaPredicted RBP20.52■□□□□ 0.88
HMBOX1-210ENST00000523613 STRCP1A6NGW2 1772 aa20.5■□□□□ 0.87
HMBOX1-210ENST00000523613 NUTM2FA1L443 756 aa20.5■□□□□ 0.87
HMBOX1-210ENST00000523613 CD163L1Q9NR16 1453 aa20.5■□□□□ 0.87
HMBOX1-210ENST00000523613 ANKARQ7Z5J8 1434 aa20.5■□□□□ 0.87
HMBOX1-210ENST00000523613 PARD3Q8TEW0 1356 aa20.5■□□□□ 0.87
HMBOX1-210ENST00000523613 FMN2Q9NZ56 1722 aa20.5■□□□□ 0.87
HMBOX1-210ENST00000523613 TOPAZ1Q8N9V7 1692 aa20.5■□□□□ 0.87
HMBOX1-210ENST00000523613 USP32Q8NFA0 1604 aa20.49■□□□□ 0.87
HMBOX1-210ENST00000523613 CGNL1Q0VF96 1302 aa20.48■□□□□ 0.87
HMBOX1-210ENST00000523613 ITSN1Q15811 1721 aa20.48■□□□□ 0.87
HMBOX1-210ENST00000523613 NCOA3Q9Y6Q9 1424 aa20.47■□□□□ 0.87
HMBOX1-210ENST00000523613 MYBBP1AQ9BQG0 1328 aaKnown RBP20.47■□□□□ 0.87
HMBOX1-210ENST00000523613 TMEM94Q12767 1356 aa20.47■□□□□ 0.87
HMBOX1-210ENST00000523613 CPSF1Q10570 1443 aaKnown RBP20.46■□□□□ 0.87
HMBOX1-210ENST00000523613 PLEKHG3A1L390 1219 aa20.46■□□□□ 0.87
HMBOX1-210ENST00000523613 ZNF335Q9H4Z2 1342 aaPredicted RBP20.45■□□□□ 0.86
HMBOX1-210ENST00000523613 C19orf44Q9H6X5 657 aa20.44■□□□□ 0.86
HMBOX1-210ENST00000523613 NSD2O96028 1365 aa20.44■□□□□ 0.86
HMBOX1-210ENST00000523613 ZNF692Q9BU19 519 aaPredicted RBP20.44■□□□□ 0.86
HMBOX1-210ENST00000523613 EDC4Q6P2E9 1401 aaKnown RBP20.42■□□□□ 0.86
HMBOX1-210ENST00000523613 AKAP12Q02952 1782 aa20.42■□□□□ 0.86
HMBOX1-210ENST00000523613 MRS2Q9HD23 443 aa20.41■□□□□ 0.86
HMBOX1-210ENST00000523613 RGPD8O14715 1765 aaPredicted RBP20.41■□□□□ 0.86
HMBOX1-210ENST00000523613 ACEP12821 1306 aa20.41■□□□□ 0.86
HMBOX1-210ENST00000523613 MON2Q7Z3U7 1717 aa20.4■□□□□ 0.86
HMBOX1-210ENST00000523613 DCCP43146 1447 aa20.4■□□□□ 0.86
HMBOX1-210ENST00000523613 NLRP13Q86W25 1043 aa20.4■□□□□ 0.86
HMBOX1-210ENST00000523613 LRRC7Q96NW7 1537 aa20.39■□□□□ 0.86
HMBOX1-210ENST00000523613 ATF3P18847 181 aa20.39■□□□□ 0.86
HMBOX1-210ENST00000523613 MORC1Q86VD1 984 aa20.39■□□□□ 0.86
HMBOX1-210ENST00000523613 NGDNQ8NEJ9 315 aaKnown RBP20.39■□□□□ 0.86
HMBOX1-210ENST00000523613 PMFBP1Q8TBY8 1022 aa20.39■□□□□ 0.86
HMBOX1-210ENST00000523613 POLR3AO14802 1390 aaPredicted RBP20.38■□□□□ 0.85
HMBOX1-210ENST00000523613 BRD4O60885 1362 aaPredicted RBP20.38■□□□□ 0.85
HMBOX1-210ENST00000523613 MSH6P52701 1360 aa20.38■□□□□ 0.85
HMBOX1-210ENST00000523613 CCDC184Q52MB2 194 aa20.38■□□□□ 0.85
HMBOX1-210ENST00000523613 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.38■□□□□ 0.853e-6■□□□□ 9.3
HMBOX1-210ENST00000523613 AEBP2Q6ZN18 517 aaPredicted RBP20.37■□□□□ 0.85
HMBOX1-210ENST00000523613 KIF20BQ96Q89 1820 aa20.37■□□□□ 0.85
HMBOX1-210ENST00000523613 FYB1O15117 783 aa20.36■□□□□ 0.85
HMBOX1-210ENST00000523613 PHF8Q9UPP1 1060 aa20.36■□□□□ 0.85
HMBOX1-210ENST00000523613 USP6P35125 1406 aa20.36■□□□□ 0.85
HMBOX1-210ENST00000523613 PPP2R1AP30153 589 aa20.36■□□□□ 0.85
HMBOX1-210ENST00000523613 ESCO1Q5FWF5 840 aa20.35■□□□□ 0.85
HMBOX1-210ENST00000523613 CADPS2Q86UW7 1296 aa20.35■□□□□ 0.85
HMBOX1-210ENST00000523613 GGNBP2Q9H3C7 697 aa20.35■□□□□ 0.85
HMBOX1-210ENST00000523613 XIRP1Q702N8 1843 aaKnown RBP20.35■□□□□ 0.85
HMBOX1-210ENST00000523613 YTHDC1Q96MU7 727 aaKnown RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms