RNA–Protein interactions for RNA: ENST00000523190.5

PVT1-217, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 443 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-217ENST00000523190 SLC26A8Q96RN1 970 aa9.29□□□□□ -0.92
PVT1-217ENST00000523190 RTN4Q9NQC3 1192 aaKnown RBP9.29□□□□□ -0.92
PVT1-217ENST00000523190 CPS1P31327 1500 aa9.29□□□□□ -0.92
PVT1-217ENST00000523190 TULP4Q9NRJ4 1543 aa9.29□□□□□ -0.92
PVT1-217ENST00000523190 MYOM1P52179 1685 aa9.29□□□□□ -0.92
PVT1-217ENST00000523190 ABCC11Q96J66 1382 aa9.28□□□□□ -0.92
PVT1-217ENST00000523190 PLEKHH1Q9ULM0 1364 aa9.28□□□□□ -0.92
PVT1-217ENST00000523190 CDCA8Q53HL2 280 aa9.28□□□□□ -0.92
PVT1-217ENST00000523190 POGKQ9P215 609 aa9.28□□□□□ -0.92
PVT1-217ENST00000523190 PTPRUQ92729 1446 aa9.28□□□□□ -0.92
PVT1-217ENST00000523190 ANKLE2Q86XL3 938 aa9.27□□□□□ -0.93
PVT1-217ENST00000523190 TECPR2O15040 1411 aa9.27□□□□□ -0.93
PVT1-217ENST00000523190 MINK1Q8N4C8 1332 aaPredicted RBP9.27□□□□□ -0.93
PVT1-217ENST00000523190 WAPLQ7Z5K2 1190 aa9.26□□□□□ -0.93
PVT1-217ENST00000523190 TBX22Q9Y458 520 aa9.26□□□□□ -0.93
PVT1-217ENST00000523190 NPHP4O75161 1426 aaPredicted RBP9.25□□□□□ -0.93
PVT1-217ENST00000523190 FAM135BQ49AJ0 1406 aa9.25□□□□□ -0.93
PVT1-217ENST00000523190 SLC4A2P04920 1241 aa9.25□□□□□ -0.93
PVT1-217ENST00000523190 EVC2Q86UK5 1308 aa9.25□□□□□ -0.93
PVT1-217ENST00000523190 XRN1Q8IZH2 1706 aaKnown RBP9.25□□□□□ -0.93
PVT1-217ENST00000523190 ROBO2Q9HCK4 1378 aa9.24□□□□□ -0.93
PVT1-217ENST00000523190 CNGB1Q14028 1251 aaPredicted RBP9.24□□□□□ -0.93
PVT1-217ENST00000523190 PANK3Q9H999 370 aa9.24□□□□□ -0.93
PVT1-217ENST00000523190 NCKAP5LQ9HCH0 1330 aa9.24□□□□□ -0.93
PVT1-217ENST00000523190 FKBP8Q14318 412 aa9.23□□□□□ -0.93
PVT1-217ENST00000523190 SIRT1Q96EB6 747 aa9.23□□□□□ -0.93
PVT1-217ENST00000523190 CABP2Q9NPB3 220 aa9.23□□□□□ -0.93
PVT1-217ENST00000523190 AMOTL2Q9Y2J4 779 aa9.23□□□□□ -0.93
PVT1-217ENST00000523190 PTCH1Q13635 1447 aa9.22□□□□□ -0.93
PVT1-217ENST00000523190 HSPA2P54652 639 aa9.22□□□□□ -0.93
PVT1-217ENST00000523190 SRPK2P78362 688 aaKnown RBP9.22□□□□□ -0.93
PVT1-217ENST00000523190 PRKRIP1Q9H875 184 aaPredicted RBP9.22□□□□□ -0.93
PVT1-217ENST00000523190 PIK3R4Q99570 1358 aa9.22□□□□□ -0.93
PVT1-217ENST00000523190 LMTK3Q96Q04 1460 aa9.21□□□□□ -0.93
PVT1-217ENST00000523190 PER1O15534 1290 aaPredicted RBP9.21□□□□□ -0.94
PVT1-217ENST00000523190 TMC1Q8TDI8 760 aa9.21□□□□□ -0.94
PVT1-217ENST00000523190 PUS7Q96PZ0 661 aaKnown RBP9.21□□□□□ -0.94
PVT1-217ENST00000523190 CDK19Q9BWU1 502 aa9.21□□□□□ -0.94
PVT1-217ENST00000523190 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.21□□□□□ -0.94
PVT1-217ENST00000523190 ADGRB2O60241 1585 aa9.2□□□□□ -0.94
PVT1-217ENST00000523190 CCER2I3L3R5 266 aa9.2□□□□□ -0.94
PVT1-217ENST00000523190 SLC12A5Q9H2X9 1139 aa9.2□□□□□ -0.94
PVT1-217ENST00000523190 ATAD2Q6PL18 1390 aa9.2□□□□□ -0.94
PVT1-217ENST00000523190 CHD2O14647 1828 aaKnown RBP9.19□□□□□ -0.94
PVT1-217ENST00000523190 WASLO00401 505 aaPredicted RBP9.19□□□□□ -0.94
PVT1-217ENST00000523190 KCNA6P17658 529 aa9.19□□□□□ -0.94
PVT1-217ENST00000523190 KTN1Q86UP2 1357 aaKnown RBP9.19□□□□□ -0.94
PVT1-217ENST00000523190 NWD1Q149M9 1564 aa9.19□□□□□ -0.94
PVT1-217ENST00000523190 CC2D1BQ5T0F9 858 aaKnown RBP9.18□□□□□ -0.94
PVT1-217ENST00000523190 YTHDC1Q96MU7 727 aaKnown RBP9.18□□□□□ -0.94
PVT1-217ENST00000523190 NSD3Q9BZ95 1437 aa9.18□□□□□ -0.94
PVT1-217ENST00000523190 KNSTRNQ9Y448 316 aa9.18□□□□□ -0.94
PVT1-217ENST00000523190 ANKRD36BQ8N2N9 1353 aa9.17□□□□□ -0.94
PVT1-217ENST00000523190 PARD3Q8TEW0 1356 aa9.17□□□□□ -0.94
PVT1-217ENST00000523190 NINLQ9Y2I6 1382 aa9.17□□□□□ -0.94
PVT1-217ENST00000523190 CCDC184Q52MB2 194 aa9.17□□□□□ -0.94
PVT1-217ENST00000523190 CARD14Q9BXL6 1004 aa9.17□□□□□ -0.94
PVT1-217ENST00000523190 ATP7BP35670 1465 aa9.16□□□□□ -0.94
PVT1-217ENST00000523190 CD163L1Q9NR16 1453 aa9.16□□□□□ -0.94
PVT1-217ENST00000523190 A0A1W2PP64 1363 aa9.16□□□□□ -0.94
PVT1-217ENST00000523190 PRR36Q9H6K5 1346 aa9.16□□□□□ -0.94
PVT1-217ENST00000523190 RALBP1Q15311 655 aa9.16□□□□□ -0.94
PVT1-217ENST00000523190 NALCNQ8IZF0 1738 aa9.16□□□□□ -0.94
PVT1-217ENST00000523190 USP32Q8NFA0 1604 aa9.16□□□□□ -0.94
PVT1-217ENST00000523190 PPIP5K1Q6PFW1 1433 aa9.15□□□□□ -0.94
PVT1-217ENST00000523190 STRCQ7RTU9 1775 aa9.15□□□□□ -0.94
PVT1-217ENST00000523190 NUDT16Q96DE0 195 aaKnown RBP9.15□□□□□ -0.94
PVT1-217ENST00000523190 CABP1Q9NZU7 370 aa9.15□□□□□ -0.94
PVT1-217ENST00000523190 TOPAZ1Q8N9V7 1692 aa9.15□□□□□ -0.94
PVT1-217ENST00000523190 NPC1L1Q9UHC9 1359 aa9.14□□□□□ -0.95
PVT1-217ENST00000523190 MYBBP1AQ9BQG0 1328 aaKnown RBP9.14□□□□□ -0.95
PVT1-217ENST00000523190 NUTM2FA1L443 756 aa9.14□□□□□ -0.95
PVT1-217ENST00000523190 RBM33Q96EV2 1170 aaKnown RBP9.14□□□□□ -0.95
PVT1-217ENST00000523190 MRS2Q9HD23 443 aa9.14□□□□□ -0.95
PVT1-217ENST00000523190 CDC42BPGQ6DT37 1551 aa9.14□□□□□ -0.95
PVT1-217ENST00000523190 NKTRP30414 1462 aaKnown RBP9.14□□□□□ -0.95
PVT1-217ENST00000523190 ADGRL3Q9HAR2 1447 aa9.14□□□□□ -0.95
PVT1-217ENST00000523190 HDGFL2Q7Z4V5 671 aaPredicted RBP9.13□□□□□ -0.95
PVT1-217ENST00000523190 TERF2IPQ9NYB0 399 aa9.13□□□□□ -0.95
PVT1-217ENST00000523190 FMN2Q9NZ56 1722 aa9.13□□□□□ -0.95
PVT1-217ENST00000523190 STRCP1A6NGW2 1772 aa9.12□□□□□ -0.95
PVT1-217ENST00000523190 ITSN1Q15811 1721 aa9.12□□□□□ -0.95
PVT1-217ENST00000523190 CCDC61Q9Y6R9 512 aa9.12□□□□□ -0.95
PVT1-217ENST00000523190 BRD4O60885 1362 aaPredicted RBP9.12□□□□□ -0.95
PVT1-217ENST00000523190 CGNL1Q0VF96 1302 aa9.11□□□□□ -0.95
PVT1-217ENST00000523190 NLRP13Q86W25 1043 aa9.11□□□□□ -0.95
PVT1-217ENST00000523190 PROSER2Q86WR7 435 aaPredicted RBP9.11□□□□□ -0.95
PVT1-217ENST00000523190 CPSF1Q10570 1443 aaKnown RBP9.11□□□□□ -0.95
PVT1-217ENST00000523190 AKAP12Q02952 1782 aa9.11□□□□□ -0.95
PVT1-217ENST00000523190 MON2Q7Z3U7 1717 aa9.11□□□□□ -0.95
PVT1-217ENST00000523190 PPP2R1AP30153 589 aa9.1□□□□□ -0.95
PVT1-217ENST00000523190 C14orf37Q86TY3 774 aa9.1□□□□□ -0.95
PVT1-217ENST00000523190 ANKARQ7Z5J8 1434 aa9.1□□□□□ -0.95
PVT1-217ENST00000523190 NSD2O96028 1365 aa9.1□□□□□ -0.95
PVT1-217ENST00000523190 KIF20BQ96Q89 1820 aa9.1□□□□□ -0.95
PVT1-217ENST00000523190 RGPD8O14715 1765 aaPredicted RBP9.09□□□□□ -0.95
PVT1-217ENST00000523190 ANKRD26Q9UPS8 1709 aa9.09□□□□□ -0.95
PVT1-217ENST00000523190 NRKQ7Z2Y5 1582 aa9.09□□□□□ -0.95
PVT1-217ENST00000523190 EDC4Q6P2E9 1401 aaKnown RBP9.09□□□□□ -0.95
PVT1-217ENST00000523190 SAMD1Q6SPF0 538 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms