RNA–Protein interactions for RNA: ENST00000523013.1

CLK4-213, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-213ENST00000523013 MMP16P51512 607 aa10.07□□□□□ -0.8
CLK4-213ENST00000523013 PARP9Q8IXQ6 854 aa10.07□□□□□ -0.8
CLK4-213ENST00000523013 AK7Q96M32 723 aa10.07□□□□□ -0.8
CLK4-213ENST00000523013 USB1Q9BQ65 265 aaKnown RBP10.07□□□□□ -0.8
CLK4-213ENST00000523013 SPIRE2Q8WWL2 714 aa10.06□□□□□ -0.8
CLK4-213ENST00000523013 GDF9O60383 454 aa10.05□□□□□ -0.8
CLK4-213ENST00000523013 RPIAP49247 311 aa10.05□□□□□ -0.8
CLK4-213ENST00000523013 PRR20EP86478 221 aa10.05□□□□□ -0.8
CLK4-213ENST00000523013 PRR20CP86479 221 aa10.05□□□□□ -0.8
CLK4-213ENST00000523013 PRR20DP86480 221 aa10.05□□□□□ -0.8
CLK4-213ENST00000523013 PRR20BP86481 221 aa10.05□□□□□ -0.8
CLK4-213ENST00000523013 PRR20AP86496 221 aa10.05□□□□□ -0.8
CLK4-213ENST00000523013 DXOO77932 396 aaKnown RBP10.04□□□□□ -0.8
CLK4-213ENST00000523013 SYMPKQ92797 1274 aaKnown RBP10.04□□□□□ -0.8
CLK4-213ENST00000523013 PCDHGC3Q9UN70 934 aa10.04□□□□□ -0.8
CLK4-213ENST00000523013 SLC24A1O60721 1099 aa10.03□□□□□ -0.8
CLK4-213ENST00000523013 TRAF7Q6Q0C0 670 aa10.03□□□□□ -0.8
CLK4-213ENST00000523013 FDX1P10109 184 aa10.02□□□□□ -0.81
CLK4-213ENST00000523013 MS4A1P11836 297 aa10.02□□□□□ -0.81
CLK4-213ENST00000523013 BEGAINQ9BUH8 593 aa10.02□□□□□ -0.81
CLK4-213ENST00000523013 SLC24A3Q9HC58 644 aa10.02□□□□□ -0.81
CLK4-213ENST00000523013 MOXD2PA6NHM9 499 aa10.01□□□□□ -0.81
CLK4-213ENST00000523013 TNFRSF10AO00220 468 aa10.01□□□□□ -0.81
CLK4-213ENST00000523013 NDUFV2P19404 249 aa10.01□□□□□ -0.81
CLK4-213ENST00000523013 PKD2L1Q9P0L9 805 aa10.01□□□□□ -0.81
CLK4-213ENST00000523013 PDE4DQ08499 809 aa9.99□□□□□ -0.81
CLK4-213ENST00000523013 RETREG3Q86VR2 466 aa9.99□□□□□ -0.81
CLK4-213ENST00000523013 CD2BP2O95400 341 aaKnown RBP9.98□□□□□ -0.81
CLK4-213ENST00000523013 JUNDP17535 347 aa9.98□□□□□ -0.81
CLK4-213ENST00000523013 FOXC1Q12948 553 aa9.97□□□□□ -0.81
CLK4-213ENST00000523013 BCANQ96GW7 911 aa9.97□□□□□ -0.81
CLK4-213ENST00000523013 TBC1D2Q9BYX2 928 aa9.97□□□□□ -0.81
CLK4-213ENST00000523013 C6orf229H3BNL8 230 aa9.96□□□□□ -0.82
CLK4-213ENST00000523013 ZBTB24O43167 697 aaPredicted RBP9.96□□□□□ -0.82
CLK4-213ENST00000523013 TRIM32Q13049 653 aa9.95□□□□□ -0.82
CLK4-213ENST00000523013 DGAT1O75907 488 aa9.94□□□□□ -0.82
CLK4-213ENST00000523013 RSBN1LQ6PCB5 846 aaPredicted RBP9.94□□□□□ -0.82
CLK4-213ENST00000523013 GJA5P36382 358 aa9.93□□□□□ -0.82
CLK4-213ENST00000523013 PKDCCQ504Y2 493 aa9.93□□□□□ -0.82
CLK4-213ENST00000523013 CCDC24Q8N4L8 307 aa9.93□□□□□ -0.82
CLK4-213ENST00000523013 FAM187AA6NFU0 413 aa9.92□□□□□ -0.82
CLK4-213ENST00000523013 DIXDC1Q155Q3 683 aa9.92□□□□□ -0.82
CLK4-213ENST00000523013 TOR4AQ9NXH8 423 aa9.92□□□□□ -0.82
CLK4-213ENST00000523013 PCDHB15Q9Y5E8 787 aa9.92□□□□□ -0.82
CLK4-213ENST00000523013 SPTLC1O15269 473 aa9.91□□□□□ -0.82
CLK4-213ENST00000523013 MYT1Q01538 1121 aa9.91□□□□□ -0.82
CLK4-213ENST00000523013 MTMR2Q13614 643 aa9.91□□□□□ -0.82
CLK4-213ENST00000523013 PTCRAQ6ISU1 281 aaPredicted RBP9.9□□□□□ -0.82
CLK4-213ENST00000523013 PRR7Q8TB68 274 aa9.9□□□□□ -0.82
CLK4-213ENST00000523013 NUDT12Q9BQG2 462 aa9.9□□□□□ -0.82
CLK4-213ENST00000523013 SPDYE5A6NIY4 337 aa9.89□□□□□ -0.83
CLK4-213ENST00000523013 WNT7AO00755 349 aa9.89□□□□□ -0.83
CLK4-213ENST00000523013 SKOR1P84550 965 aa9.88□□□□□ -0.83
CLK4-213ENST00000523013 RIC3Q7Z5B4 369 aa9.88□□□□□ -0.83
CLK4-213ENST00000523013 PTPRNQ16849 979 aa9.87□□□□□ -0.83
CLK4-213ENST00000523013 MYSM1Q5VVJ2 828 aa9.87□□□□□ -0.83
CLK4-213ENST00000523013 DESI1Q6ICB0 168 aa9.87□□□□□ -0.83
CLK4-213ENST00000523013 CYP4X1Q8N118 509 aa9.87□□□□□ -0.83
CLK4-213ENST00000523013 CCNYL3P0C7X3 344 aa9.86□□□□□ -0.83
CLK4-213ENST00000523013 MRGPRX2Q96LB1 330 aa9.86□□□□□ -0.83
CLK4-213ENST00000523013 LIMD1Q9UGP4 676 aa9.86□□□□□ -0.83
CLK4-213ENST00000523013 CFAP99D6REC4 459 aa9.85□□□□□ -0.83
CLK4-213ENST00000523013 HRCP23327 699 aa9.85□□□□□ -0.83
CLK4-213ENST00000523013 WNT7BP56706 349 aa9.85□□□□□ -0.83
CLK4-213ENST00000523013 PRPF38BQ5VTL8 546 aaKnown RBP9.84□□□□□ -0.83
CLK4-213ENST00000523013 CABLES1Q8TDN4 633 aa9.84□□□□□ -0.83
CLK4-213ENST00000523013 ZBTB3Q9H5J0 574 aa9.84□□□□□ -0.83
CLK4-213ENST00000523013 EVA1BQ9NVM1 165 aa9.84□□□□□ -0.83
CLK4-213ENST00000523013 AVPP01185 164 aa9.83□□□□□ -0.84
CLK4-213ENST00000523013 RC3H1Q5TC82 1133 aaKnown RBP9.83□□□□□ -0.84
CLK4-213ENST00000523013 TTC24A2A3L6 582 aaPredicted RBP9.82□□□□□ -0.84
CLK4-213ENST00000523013 ST8SIA5O15466 376 aa9.82□□□□□ -0.84
CLK4-213ENST00000523013 QPCTQ16769 361 aa9.82□□□□□ -0.84
CLK4-213ENST00000523013 CSPP1Q1MSJ5 1256 aa9.82□□□□□ -0.84
CLK4-213ENST00000523013 TUSC1Q2TAM9 212 aa9.82□□□□□ -0.84
CLK4-213ENST00000523013 SNIP1Q8TAD8 396 aaKnown RBP9.82□□□□□ -0.84
CLK4-213ENST00000523013 AAASQ9NRG9 546 aa9.82□□□□□ -0.84
CLK4-213ENST00000523013 SMPD1P17405 629 aa9.81□□□□□ -0.84
CLK4-213ENST00000523013 KCNH2Q12809 1159 aa9.81□□□□□ -0.84
CLK4-213ENST00000523013 LYPD8Q6UX82 237 aa9.81□□□□□ -0.84
CLK4-213ENST00000523013 UNC93B1Q9H1C4 597 aa9.81□□□□□ -0.84
CLK4-213ENST00000523013 GPBP1L1Q9HC44 474 aaPredicted RBP9.81□□□□□ -0.84
CLK4-213ENST00000523013 J3QL48 77 aa9.8□□□□□ -0.84
CLK4-213ENST00000523013 LILRB3O75022 631 aa9.8□□□□□ -0.84
CLK4-213ENST00000523013 ZNF787Q6DD87 383 aa9.8□□□□□ -0.84
CLK4-213ENST00000523013 CRIPAKQ8N1N5 446 aa9.8□□□□□ -0.84
CLK4-213ENST00000523013 SH3BP2P78314 561 aa9.79□□□□□ -0.84
CLK4-213ENST00000523013 KDM4CQ9H3R0 1056 aa9.79□□□□□ -0.84
CLK4-213ENST00000523013 POTECB2RU33 542 aa9.78□□□□□ -0.84
CLK4-213ENST00000523013 CLK2P49760 499 aaKnown RBP9.78□□□□□ -0.84
CLK4-213ENST00000523013 PER1O15534 1290 aaPredicted RBP9.76□□□□□ -0.85
CLK4-213ENST00000523013 SIAH2O43255 324 aa9.76□□□□□ -0.85
CLK4-213ENST00000523013 F12P00748 615 aaPredicted RBP9.76□□□□□ -0.85
CLK4-213ENST00000523013 SMCPP49901 116 aaPredicted RBP9.76□□□□□ -0.85
CLK4-213ENST00000523013 LINC01559Q495D7 138 aa9.76□□□□□ -0.85
CLK4-213ENST00000523013 BAP1Q92560 729 aa9.76□□□□□ -0.85
CLK4-213ENST00000523013 RSPH6AQ9H0K4 717 aa9.76□□□□□ -0.85
CLK4-213ENST00000523013 POLR3EQ9NVU0 708 aa9.76□□□□□ -0.85
CLK4-213ENST00000523013 DACH1Q9UI36 760 aa9.76□□□□□ -0.85
CLK4-213ENST00000523013 NUTM2BA6NNL0 878 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms