RNA–Protein interactions for RNA: ENST00000522855.5

SKP1-210, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SKP1, Length 802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-210ENST00000522855 PRR20BP86481 221 aa8.88□□□□□ -0.99
SKP1-210ENST00000522855 PRR20AP86496 221 aa8.88□□□□□ -0.99
SKP1-210ENST00000522855 MSS51Q4VC12 460 aa8.88□□□□□ -0.99
SKP1-210ENST00000522855 PARP9Q8IXQ6 854 aa8.88□□□□□ -0.99
SKP1-210ENST00000522855 DDRGK1Q96HY6 314 aa8.88□□□□□ -0.99
SKP1-210ENST00000522855 FAM217BQ9NTX9 383 aaPredicted RBP8.87□□□□□ -0.99
SKP1-210ENST00000522855 GDF9O60383 454 aa8.86□□□□□ -0.99
SKP1-210ENST00000522855 ZNF697Q5TEC3 545 aa8.86□□□□□ -0.99
SKP1-210ENST00000522855 TRAF7Q6Q0C0 670 aa8.86□□□□□ -0.99
SKP1-210ENST00000522855 REPIN1Q9BWE0 567 aaKnown RBP8.86□□□□□ -0.99
SKP1-210ENST00000522855 GPCPD1Q9NPB8 672 aa8.86□□□□□ -0.99
SKP1-210ENST00000522855 KDM4AO75164 1064 aa8.85□□□□□ -0.99
SKP1-210ENST00000522855 CLCN1P35523 988 aa8.85□□□□□ -0.99
SKP1-210ENST00000522855 HLA-CQ95604 372 aa8.85□□□□□ -0.99
SKP1-210ENST00000522855 HOXA2O43364 376 aa8.84□□□□□ -0.99
SKP1-210ENST00000522855 IL27Q8NEV9 243 aa8.84□□□□□ -0.99
SKP1-210ENST00000522855 FCF1Q9Y324 198 aaKnown RBP8.84□□□□□ -0.99
SKP1-210ENST00000522855 GRIPAP1Q4V328 841 aa8.83□□□□□ -1
SKP1-210ENST00000522855 RPIAP49247 311 aa8.82□□□□□ -1
SKP1-210ENST00000522855 MMP16P51512 607 aa8.82□□□□□ -1
SKP1-210ENST00000522855 USP46P62068 366 aa8.82□□□□□ -1
SKP1-210ENST00000522855 GIGYF2Q6Y7W6 1299 aaKnown RBP8.82□□□□□ -1
SKP1-210ENST00000522855 PKD2L1Q9P0L9 805 aa8.82□□□□□ -1
SKP1-210ENST00000522855 FAM117AQ9C073 453 aa8.81□□□□□ -1
SKP1-210ENST00000522855 DXOO77932 396 aaKnown RBP8.8□□□□□ -1
SKP1-210ENST00000522855 Q3C1V9 767 aa8.8□□□□□ -1
SKP1-210ENST00000522855 TNFRSF10AO00220 468 aa8.78□□□□□ -1
SKP1-210ENST00000522855 GUCA2AQ02747 115 aa8.78□□□□□ -1
SKP1-210ENST00000522855 USB1Q9BQ65 265 aaKnown RBP8.77□□□□□ -1.01
SKP1-210ENST00000522855 PLEKHG3A1L390 1219 aa8.76□□□□□ -1.01
SKP1-210ENST00000522855 DGAT1O75907 488 aa8.76□□□□□ -1.01
SKP1-210ENST00000522855 MYT1Q01538 1121 aa8.76□□□□□ -1.01
SKP1-210ENST00000522855 TIMELESSQ9UNS1 1208 aa8.76□□□□□ -1.01
SKP1-210ENST00000522855 MS4A1P11836 297 aa8.74□□□□□ -1.01
SKP1-210ENST00000522855 C14orf37Q86TY3 774 aa8.74□□□□□ -1.01
SKP1-210ENST00000522855 GOPCQ9HD26 462 aa8.74□□□□□ -1.01
SKP1-210ENST00000522855 TOR4AQ9NXH8 423 aa8.74□□□□□ -1.01
SKP1-210ENST00000522855 PCDHGC3Q9UN70 934 aa8.74□□□□□ -1.01
SKP1-210ENST00000522855 SSTR3P32745 418 aaPredicted RBP8.73□□□□□ -1.01
SKP1-210ENST00000522855 PKDCCQ504Y2 493 aa8.73□□□□□ -1.01
SKP1-210ENST00000522855 SPIRE2Q8WWL2 714 aa8.73□□□□□ -1.01
SKP1-210ENST00000522855 SYMPKQ92797 1274 aaKnown RBP8.72□□□□□ -1.01
SKP1-210ENST00000522855 FAM187AA6NFU0 413 aa8.71□□□□□ -1.02
SKP1-210ENST00000522855 JUNDP17535 347 aa8.71□□□□□ -1.02
SKP1-210ENST00000522855 TRIM32Q13049 653 aa8.71□□□□□ -1.02
SKP1-210ENST00000522855 RSPH6AQ9H0K4 717 aa8.71□□□□□ -1.02
SKP1-210ENST00000522855 CD2BP2O95400 341 aaKnown RBP8.7□□□□□ -1.02
SKP1-210ENST00000522855 FOXC1Q12948 553 aa8.7□□□□□ -1.02
SKP1-210ENST00000522855 RETREG3Q86VR2 466 aa8.7□□□□□ -1.02
SKP1-210ENST00000522855 NUTM1Q86Y26 1132 aa8.7□□□□□ -1.02
SKP1-210ENST00000522855 AVPP01185 164 aa8.69□□□□□ -1.02
SKP1-210ENST00000522855 FDX1P10109 184 aa8.69□□□□□ -1.02
SKP1-210ENST00000522855 SH3D19Q5HYK7 790 aa8.69□□□□□ -1.02
SKP1-210ENST00000522855 CRIPAKQ8N1N5 446 aa8.69□□□□□ -1.02
SKP1-210ENST00000522855 PCMTD1Q96MG8 357 aaPredicted RBP8.69□□□□□ -1.02
SKP1-210ENST00000522855 BEGAINQ9BUH8 593 aa8.69□□□□□ -1.02
SKP1-210ENST00000522855 MOXD2PA6NHM9 499 aa8.68□□□□□ -1.02
SKP1-210ENST00000522855 WNT7AO00755 349 aa8.68□□□□□ -1.02
SKP1-210ENST00000522855 DIXDC1Q155Q3 683 aa8.68□□□□□ -1.02
SKP1-210ENST00000522855 AAASQ9NRG9 546 aa8.67□□□□□ -1.02
SKP1-210ENST00000522855 ST8SIA5O15466 376 aa8.66□□□□□ -1.02
SKP1-210ENST00000522855 ZBTB24O43167 697 aaPredicted RBP8.66□□□□□ -1.02
SKP1-210ENST00000522855 NDUFV2P19404 249 aa8.66□□□□□ -1.02
SKP1-210ENST00000522855 SKOR1P84550 965 aa8.66□□□□□ -1.02
SKP1-210ENST00000522855 POTECB2RU33 542 aa8.64□□□□□ -1.03
SKP1-210ENST00000522855 GJA5P36382 358 aa8.64□□□□□ -1.03
SKP1-210ENST00000522855 ZNF787Q6DD87 383 aa8.64□□□□□ -1.03
SKP1-210ENST00000522855 CYP4X1Q8N118 509 aa8.64□□□□□ -1.03
SKP1-210ENST00000522855 SKIV2LQ15477 1246 aaKnown RBP8.63□□□□□ -1.03
SKP1-210ENST00000522855 PTCRAQ6ISU1 281 aaPredicted RBP8.63□□□□□ -1.03
SKP1-210ENST00000522855 MRGPRX2Q96LB1 330 aa8.63□□□□□ -1.03
SKP1-210ENST00000522855 NUDT12Q9BQG2 462 aa8.63□□□□□ -1.03
SKP1-210ENST00000522855 TBC1D2Q9BYX2 928 aa8.63□□□□□ -1.03
SKP1-210ENST00000522855 SMPD1P17405 629 aa8.62□□□□□ -1.03
SKP1-210ENST00000522855 SMCPP49901 116 aaPredicted RBP8.62□□□□□ -1.03
SKP1-210ENST00000522855 WNT7BP56706 349 aa8.62□□□□□ -1.03
SKP1-210ENST00000522855 RSBN1LQ6PCB5 846 aaPredicted RBP8.62□□□□□ -1.03
SKP1-210ENST00000522855 ATP1B4Q9UN42 357 aaPredicted RBP8.62□□□□□ -1.03
SKP1-210ENST00000522855 C6orf229H3BNL8 230 aa8.61□□□□□ -1.03
SKP1-210ENST00000522855 PTPRNQ16849 979 aa8.61□□□□□ -1.03
SKP1-210ENST00000522855 CCDC24Q8N4L8 307 aa8.61□□□□□ -1.03
SKP1-210ENST00000522855 SPTLC1O15269 473 aa8.6□□□□□ -1.03
SKP1-210ENST00000522855 CCNYL3P0C7X3 344 aa8.6□□□□□ -1.03
SKP1-210ENST00000522855 CLK2P49760 499 aaKnown RBP8.6□□□□□ -1.03
SKP1-210ENST00000522855 FLIIQ13045 1269 aa8.6□□□□□ -1.03
SKP1-210ENST00000522855 CTC1Q2NKJ3 1217 aa8.6□□□□□ -1.03
SKP1-210ENST00000522855 MYSM1Q5VVJ2 828 aa8.6□□□□□ -1.03
SKP1-210ENST00000522855 DESI1Q6ICB0 168 aa8.6□□□□□ -1.03
SKP1-210ENST00000522855 SNIP1Q8TAD8 396 aaKnown RBP8.6□□□□□ -1.03
SKP1-210ENST00000522855 DACH1Q9UI36 760 aa8.6□□□□□ -1.03
SKP1-210ENST00000522855 MTMR2Q13614 643 aa8.59□□□□□ -1.03
SKP1-210ENST00000522855 RC3H1Q5TC82 1133 aaKnown RBP8.59□□□□□ -1.03
SKP1-210ENST00000522855 PRR7Q8TB68 274 aa8.59□□□□□ -1.03
SKP1-210ENST00000522855 SPDYE5A6NIY4 337 aa8.58□□□□□ -1.04
SKP1-210ENST00000522855 J3QL48 77 aa8.58□□□□□ -1.04
SKP1-210ENST00000522855 ZNF775Q96BV0 537 aaPredicted RBP8.58□□□□□ -1.04
SKP1-210ENST00000522855 TTC24A2A3L6 582 aaPredicted RBP8.57□□□□□ -1.04
SKP1-210ENST00000522855 PCDHB15Q9Y5E8 787 aa8.57□□□□□ -1.04
SKP1-210ENST00000522855 CFAP99D6REC4 459 aa8.56□□□□□ -1.04
SKP1-210ENST00000522855 SIAH2O43255 324 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms