RNA–Protein interactions for RNA: ENST00000522854.5

CSGALNACT1-211, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 1,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-211ENST00000522854 AMOTL2Q9Y2J4 779 aa20.71■□□□□ 0.91
CSGALNACT1-211ENST00000522854 TMC1Q8TDI8 760 aa20.7■□□□□ 0.9
CSGALNACT1-211ENST00000522854 CPS1P31327 1500 aa20.7■□□□□ 0.9
CSGALNACT1-211ENST00000522854 SRPK2P78362 688 aaKnown RBP20.7■□□□□ 0.9
CSGALNACT1-211ENST00000522854 SLC12A5Q9H2X9 1139 aa20.7■□□□□ 0.9
CSGALNACT1-211ENST00000522854 TECPR2O15040 1411 aa20.7■□□□□ 0.9
CSGALNACT1-211ENST00000522854 CCDC184Q52MB2 194 aa20.68■□□□□ 0.9
CSGALNACT1-211ENST00000522854 SLC24A1O60721 1099 aa20.67■□□□□ 0.9
CSGALNACT1-211ENST00000522854 CDK19Q9BWU1 502 aa20.67■□□□□ 0.9
CSGALNACT1-211ENST00000522854 DIP2AQ14689 1571 aa20.67■□□□□ 0.9
CSGALNACT1-211ENST00000522854 CC2D1BQ5T0F9 858 aaKnown RBP20.66■□□□□ 0.9
CSGALNACT1-211ENST00000522854 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.66■□□□□ 0.9
CSGALNACT1-211ENST00000522854 NPHP4O75161 1426 aaPredicted RBP20.66■□□□□ 0.9
CSGALNACT1-211ENST00000522854 KCNA6P17658 529 aa20.65■□□□□ 0.9
CSGALNACT1-211ENST00000522854 RBM33Q96EV2 1170 aaKnown RBP20.65■□□□□ 0.9
CSGALNACT1-211ENST00000522854 FAM135BQ49AJ0 1406 aa20.64■□□□□ 0.9
CSGALNACT1-211ENST00000522854 CARD14Q9BXL6 1004 aa20.64■□□□□ 0.89
CSGALNACT1-211ENST00000522854 XRN1Q8IZH2 1706 aaKnown RBP20.63■□□□□ 0.89
CSGALNACT1-211ENST00000522854 LMTK3Q96Q04 1460 aa20.61■□□□□ 0.89
CSGALNACT1-211ENST00000522854 CHD2O14647 1828 aaKnown RBP20.61■□□□□ 0.89
CSGALNACT1-211ENST00000522854 NUTM2FA1L443 756 aa20.61■□□□□ 0.89
CSGALNACT1-211ENST00000522854 CCER2I3L3R5 266 aa20.61■□□□□ 0.89
CSGALNACT1-211ENST00000522854 SIRT1Q96EB6 747 aa20.6■□□□□ 0.89
CSGALNACT1-211ENST00000522854 KNSTRNQ9Y448 316 aa20.6■□□□□ 0.89
CSGALNACT1-211ENST00000522854 WASLO00401 505 aaPredicted RBP20.59■□□□□ 0.89
CSGALNACT1-211ENST00000522854 PTCH1Q13635 1447 aa20.57■□□□□ 0.88
CSGALNACT1-211ENST00000522854 AMER1Q5JTC6 1135 aaPredicted RBP20.57■□□□□ 0.88
CSGALNACT1-211ENST00000522854 KTN1Q86UP2 1357 aaKnown RBP20.57■□□□□ 0.88
CSGALNACT1-211ENST00000522854 CABP1Q9NZU7 370 aa20.57■□□□□ 0.88
CSGALNACT1-211ENST00000522854 NSD3Q9BZ95 1437 aa20.56■□□□□ 0.88
CSGALNACT1-211ENST00000522854 ATAD2Q6PL18 1390 aa20.55■□□□□ 0.88
CSGALNACT1-211ENST00000522854 PIK3R4Q99570 1358 aa20.55■□□□□ 0.88
CSGALNACT1-211ENST00000522854 PUS7Q96PZ0 661 aaKnown RBP20.55■□□□□ 0.88
CSGALNACT1-211ENST00000522854 A0A1W2PP64 1363 aa20.54■□□□□ 0.88
CSGALNACT1-211ENST00000522854 PARD3Q8TEW0 1356 aa20.54■□□□□ 0.88
CSGALNACT1-211ENST00000522854 PRR36Q9H6K5 1346 aa20.54■□□□□ 0.88
CSGALNACT1-211ENST00000522854 CD163L1Q9NR16 1453 aa20.54■□□□□ 0.88
CSGALNACT1-211ENST00000522854 MRS2Q9HD23 443 aa20.54■□□□□ 0.88
CSGALNACT1-211ENST00000522854 NUDT16Q96DE0 195 aaKnown RBP20.52■□□□□ 0.88
CSGALNACT1-211ENST00000522854 ANKRD36BQ8N2N9 1353 aa20.52■□□□□ 0.88
CSGALNACT1-211ENST00000522854 ADGRB2O60241 1585 aa20.52■□□□□ 0.88
CSGALNACT1-211ENST00000522854 STRCQ7RTU9 1775 aa20.51■□□□□ 0.87
CSGALNACT1-211ENST00000522854 RALBP1Q15311 655 aa20.51■□□□□ 0.87
CSGALNACT1-211ENST00000522854 ATP7BP35670 1465 aa20.5■□□□□ 0.87
CSGALNACT1-211ENST00000522854 PPIP5K1Q6PFW1 1433 aa20.5■□□□□ 0.87
CSGALNACT1-211ENST00000522854 RGPD8O14715 1765 aaPredicted RBP20.5■□□□□ 0.87
CSGALNACT1-211ENST00000522854 NALCNQ8IZF0 1738 aa20.49■□□□□ 0.87
CSGALNACT1-211ENST00000522854 MYBBP1AQ9BQG0 1328 aaKnown RBP20.49■□□□□ 0.87
CSGALNACT1-211ENST00000522854 STRCP1A6NGW2 1772 aa20.48■□□□□ 0.87
CSGALNACT1-211ENST00000522854 USP32Q8NFA0 1604 aa20.47■□□□□ 0.87
CSGALNACT1-211ENST00000522854 FAM9BQ8IZU0 186 aa20.47■□□□□ 0.87
CSGALNACT1-211ENST00000522854 NINLQ9Y2I6 1382 aa20.46■□□□□ 0.87
CSGALNACT1-211ENST00000522854 CCDC61Q9Y6R9 512 aa20.46■□□□□ 0.87
CSGALNACT1-211ENST00000522854 TNNT2P45379 298 aaPredicted RBP20.45■□□□□ 0.86
CSGALNACT1-211ENST00000522854 TERF2IPQ9NYB0 399 aa20.45■□□□□ 0.86
CSGALNACT1-211ENST00000522854 NWD1Q149M9 1564 aa20.44■□□□□ 0.86
CSGALNACT1-211ENST00000522854 NKTRP30414 1462 aaKnown RBP20.43■□□□□ 0.86
CSGALNACT1-211ENST00000522854 TOPAZ1Q8N9V7 1692 aa20.43■□□□□ 0.86
CSGALNACT1-211ENST00000522854 HDGFL2Q7Z4V5 671 aaPredicted RBP20.43■□□□□ 0.86
CSGALNACT1-211ENST00000522854 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.43■□□□□ 0.86
CSGALNACT1-211ENST00000522854 PPP2R1AP30153 589 aa20.42■□□□□ 0.86
CSGALNACT1-211ENST00000522854 C14orf37Q86TY3 774 aa20.42■□□□□ 0.86
CSGALNACT1-211ENST00000522854 PMFBP1Q8TBY8 1022 aa20.42■□□□□ 0.86
CSGALNACT1-211ENST00000522854 GGNBP2Q9H3C7 697 aa20.42■□□□□ 0.86
CSGALNACT1-211ENST00000522854 CGNL1Q0VF96 1302 aa20.42■□□□□ 0.86
CSGALNACT1-211ENST00000522854 NPC1L1Q9UHC9 1359 aa20.42■□□□□ 0.86
CSGALNACT1-211ENST00000522854 NLRP13Q86W25 1043 aa20.41■□□□□ 0.86
CSGALNACT1-211ENST00000522854 PROSER2Q86WR7 435 aaPredicted RBP20.41■□□□□ 0.86
CSGALNACT1-211ENST00000522854 CDC42BPGQ6DT37 1551 aa20.41■□□□□ 0.86
CSGALNACT1-211ENST00000522854 SENP3-EIF4A1A0A087X0R7 540 aa20.41■□□□□ 0.86
CSGALNACT1-211ENST00000522854 CPSF1Q10570 1443 aaKnown RBP20.4■□□□□ 0.86
CSGALNACT1-211ENST00000522854 FMN2Q9NZ56 1722 aa20.4■□□□□ 0.86
CSGALNACT1-211ENST00000522854 ITSN1Q15811 1721 aa20.39■□□□□ 0.85
CSGALNACT1-211ENST00000522854 BRD4O60885 1362 aaPredicted RBP20.38■□□□□ 0.85
CSGALNACT1-211ENST00000522854 ACEP12821 1306 aa20.38■□□□□ 0.85
CSGALNACT1-211ENST00000522854 FYB1O15117 783 aa20.38■□□□□ 0.85
CSGALNACT1-211ENST00000522854 MORC1Q86VD1 984 aa20.38■□□□□ 0.85
CSGALNACT1-211ENST00000522854 AKAP12Q02952 1782 aa20.38■□□□□ 0.85
CSGALNACT1-211ENST00000522854 ADGRL3Q9HAR2 1447 aa20.38■□□□□ 0.85
CSGALNACT1-211ENST00000522854 PNISRQ8TF01 805 aaKnown RBP20.37■□□□□ 0.85
CSGALNACT1-211ENST00000522854 MON2Q7Z3U7 1717 aa20.37■□□□□ 0.85
CSGALNACT1-211ENST00000522854 ZRANB1Q9UGI0 708 aa20.36■□□□□ 0.85
CSGALNACT1-211ENST00000522854 KIF20BQ96Q89 1820 aa20.36■□□□□ 0.85
CSGALNACT1-211ENST00000522854 ZNF335Q9H4Z2 1342 aaPredicted RBP20.35■□□□□ 0.85
CSGALNACT1-211ENST00000522854 NME9Q86XW9 330 aa20.35■□□□□ 0.85
CSGALNACT1-211ENST00000522854 FBLN1P23142 703 aa20.34■□□□□ 0.85
CSGALNACT1-211ENST00000522854 TMEM94Q12767 1356 aa20.34■□□□□ 0.85
CSGALNACT1-211ENST00000522854 PLEKHG3A1L390 1219 aa20.34■□□□□ 0.85
CSGALNACT1-211ENST00000522854 HNRNPUQ00839 825 aaKnown RBP eCLIP20.32■□□□□ 0.84
CSGALNACT1-211ENST00000522854 EDC4Q6P2E9 1401 aaKnown RBP20.31■□□□□ 0.84
CSGALNACT1-211ENST00000522854 NGDNQ8NEJ9 315 aaKnown RBP20.31■□□□□ 0.84
CSGALNACT1-211ENST00000522854 ANKRD26Q9UPS8 1709 aa20.31■□□□□ 0.84
CSGALNACT1-211ENST00000522854 NRKQ7Z2Y5 1582 aa20.3■□□□□ 0.84
CSGALNACT1-211ENST00000522854 ANKARQ7Z5J8 1434 aa20.3■□□□□ 0.84
CSGALNACT1-211ENST00000522854 XIRP1Q702N8 1843 aaKnown RBP20.3■□□□□ 0.84
CSGALNACT1-211ENST00000522854 NSD2O96028 1365 aa20.29■□□□□ 0.84
CSGALNACT1-211ENST00000522854 USP6P35125 1406 aa20.29■□□□□ 0.84
CSGALNACT1-211ENST00000522854 CENPBP07199 599 aaPredicted RBP20.29■□□□□ 0.84
CSGALNACT1-211ENST00000522854 ESCO1Q5FWF5 840 aa20.28■□□□□ 0.84
CSGALNACT1-211ENST00000522854 ORAI2Q96SN7 254 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms