RNA–Protein interactions for RNA: ENST00000522638.1

IGKV3D-34-201, Transcript of immunoglobulin kappa variable 3D-34 (pseudogene), humanhuman

BASIC

Gene IGKV3D-34, Length 302 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-34-201ENST00000522638 ABCA3Q99758 1704 aa9.6□□□□□ -0.87
IGKV3D-34-201ENST00000522638 MYOM3Q5VTT5 1437 aa9.6□□□□□ -0.87
IGKV3D-34-201ENST00000522638 DISP2A7MBM2 1401 aa9.59□□□□□ -0.87
IGKV3D-34-201ENST00000522638 ABCC5O15440 1437 aa9.59□□□□□ -0.87
IGKV3D-34-201ENST00000522638 SF3B2Q13435 895 aaKnown RBP9.59□□□□□ -0.87
IGKV3D-34-201ENST00000522638 NRAPQ86VF7 1730 aa9.59□□□□□ -0.87
IGKV3D-34-201ENST00000522638 R3HDM1Q15032 1099 aaKnown RBP9.58□□□□□ -0.88
IGKV3D-34-201ENST00000522638 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.58□□□□□ -0.88
IGKV3D-34-201ENST00000522638 UTRNP46939 3433 aa9.57□□□□□ -0.88
IGKV3D-34-201ENST00000522638 SENP3-EIF4A1A0A087X0R7 540 aa9.57□□□□□ -0.88
IGKV3D-34-201ENST00000522638 HDGFP51858 240 aaKnown RBP9.57□□□□□ -0.88
IGKV3D-34-201ENST00000522638 METP08581 1390 aa9.56□□□□□ -0.88
IGKV3D-34-201ENST00000522638 BAG6P46379 1132 aa9.56□□□□□ -0.88
IGKV3D-34-201ENST00000522638 UNC5CLQ8IV45 518 aa9.56□□□□□ -0.88
IGKV3D-34-201ENST00000522638 SEPT12Q8IYM1 358 aa9.56□□□□□ -0.88
IGKV3D-34-201ENST00000522638 ONECUT3O60422 494 aaPredicted RBP9.55□□□□□ -0.88
IGKV3D-34-201ENST00000522638 ORAI2Q96SN7 254 aa9.55□□□□□ -0.88
IGKV3D-34-201ENST00000522638 RRP7BPQ9NSQ0 103 aa9.55□□□□□ -0.88
IGKV3D-34-201ENST00000522638 DAPK1P53355 1430 aa9.55□□□□□ -0.88
IGKV3D-34-201ENST00000522638 ADGRB2O60241 1585 aa9.54□□□□□ -0.88
IGKV3D-34-201ENST00000522638 ADGRL2O95490 1459 aa9.54□□□□□ -0.88
IGKV3D-34-201ENST00000522638 ZNF784Q8NCA9 323 aaPredicted RBP9.54□□□□□ -0.88
IGKV3D-34-201ENST00000522638 THSD7AQ9UPZ6 1657 aa9.54□□□□□ -0.88
IGKV3D-34-201ENST00000522638 NINLQ9Y2I6 1382 aa9.53□□□□□ -0.88
IGKV3D-34-201ENST00000522638 EN1Q05925 392 aaPredicted RBP9.53□□□□□ -0.88
IGKV3D-34-201ENST00000522638 KRT27Q7Z3Y8 459 aa9.53□□□□□ -0.88
IGKV3D-34-201ENST00000522638 CDC42BPGQ6DT37 1551 aa9.53□□□□□ -0.88
IGKV3D-34-201ENST00000522638 PRAG1Q86YV5 1406 aa9.52□□□□□ -0.89
IGKV3D-34-201ENST00000522638 CASZ1Q86V15 1759 aa9.51□□□□□ -0.89
IGKV3D-34-201ENST00000522638 C1QTNF8P60827 252 aa9.51□□□□□ -0.89
IGKV3D-34-201ENST00000522638 VPS72Q15906 364 aa9.5□□□□□ -0.89
IGKV3D-34-201ENST00000522638 NEXMIFQ5QGS0 1516 aa9.5□□□□□ -0.89
IGKV3D-34-201ENST00000522638 MYOM1P52179 1685 aa9.49□□□□□ -0.89
IGKV3D-34-201ENST00000522638 KIF1AQ12756 1690 aa9.49□□□□□ -0.89
IGKV3D-34-201ENST00000522638 NPHP3Q7Z494 1330 aa9.49□□□□□ -0.89
IGKV3D-34-201ENST00000522638 NRKQ7Z2Y5 1582 aa9.49□□□□□ -0.89
IGKV3D-34-201ENST00000522638 CHGAP10645 457 aaKnown RBP9.48□□□□□ -0.89
IGKV3D-34-201ENST00000522638 EZH2Q15910 746 aaKnown RBP9.48□□□□□ -0.89
IGKV3D-34-201ENST00000522638 ANKRD30AQ9BXX3 1397 aa9.48□□□□□ -0.89
IGKV3D-34-201ENST00000522638 ROBO2Q9HCK4 1378 aa9.48□□□□□ -0.89
IGKV3D-34-201ENST00000522638 CAMKK2Q96RR4 588 aa9.47□□□□□ -0.89
IGKV3D-34-201ENST00000522638 FMN2Q9NZ56 1722 aa9.47□□□□□ -0.89
IGKV3D-34-201ENST00000522638 RGPD8O14715 1765 aaPredicted RBP9.47□□□□□ -0.89
IGKV3D-34-201ENST00000522638 RGPD3A6NKT7 1758 aaPredicted RBP9.46□□□□□ -0.9
IGKV3D-34-201ENST00000522638 RGPD4Q7Z3J3 1758 aa9.46□□□□□ -0.9
IGKV3D-34-201ENST00000522638 PARD3Q8TEW0 1356 aa9.46□□□□□ -0.9
IGKV3D-34-201ENST00000522638 CRYBG1Q9Y4K1 1723 aa9.45□□□□□ -0.9
IGKV3D-34-201ENST00000522638 COL14A1Q05707 1796 aaKnown RBP9.45□□□□□ -0.9
IGKV3D-34-201ENST00000522638 XPCQ01831 940 aaPredicted RBP9.44□□□□□ -0.9
IGKV3D-34-201ENST00000522638 SPATA31A3Q5VYP0 1347 aa9.44□□□□□ -0.9
IGKV3D-34-201ENST00000522638 HFM1A2PYH4 1435 aa9.43□□□□□ -0.9
IGKV3D-34-201ENST00000522638 ANKRD50Q9ULJ7 1429 aa9.43□□□□□ -0.9
IGKV3D-34-201ENST00000522638 DCAF8L1A6NGE4 600 aa9.43□□□□□ -0.9
IGKV3D-34-201ENST00000522638 FAM182BQ5T319 152 aa9.43□□□□□ -0.9
IGKV3D-34-201ENST00000522638 KIF1BO60333 1816 aa9.42□□□□□ -0.9
IGKV3D-34-201ENST00000522638 SHANK3Q9BYB0 1731 aa9.42□□□□□ -0.9
IGKV3D-34-201ENST00000522638 IFT172Q9UG01 1749 aa9.42□□□□□ -0.9
IGKV3D-34-201ENST00000522638 CLTCL1P53675 1640 aa9.42□□□□□ -0.9
IGKV3D-34-201ENST00000522638 KANK4Q5T7N3 995 aaPredicted RBP9.42□□□□□ -0.9
IGKV3D-34-201ENST00000522638 SPON1Q9HCB6 807 aa9.42□□□□□ -0.9
IGKV3D-34-201ENST00000522638 CCDC144AA2RUR9 1427 aa9.41□□□□□ -0.9
IGKV3D-34-201ENST00000522638 TNS3Q68CZ2 1445 aa9.41□□□□□ -0.9
IGKV3D-34-201ENST00000522638 FOXO3O43524 673 aa9.41□□□□□ -0.9
IGKV3D-34-201ENST00000522638 KCNQ2O43526 872 aa9.41□□□□□ -0.9
IGKV3D-34-201ENST00000522638 FAM98CQ17RN3 349 aaKnown RBP9.41□□□□□ -0.9
IGKV3D-34-201ENST00000522638 PPP1R1BQ9UD71 204 aaPredicted RBP9.41□□□□□ -0.9
IGKV3D-34-201ENST00000522638 CHIC2Q9UKJ5 165 aa9.41□□□□□ -0.9
IGKV3D-34-201ENST00000522638 TRPM3Q9HCF6 1732 aaPredicted RBP9.41□□□□□ -0.9
IGKV3D-34-201ENST00000522638 SBF2Q86WG5 1849 aa9.4□□□□□ -0.9
IGKV3D-34-201ENST00000522638 LRPPRCP42704 1394 aaKnown RBP9.4□□□□□ -0.9
IGKV3D-34-201ENST00000522638 KNDC1Q76NI1 1749 aa9.4□□□□□ -0.9
IGKV3D-34-201ENST00000522638 ESCO1Q5FWF5 840 aa9.4□□□□□ -0.9
IGKV3D-34-201ENST00000522638 CCDC9Q9Y3X0 531 aaKnown RBP9.4□□□□□ -0.9
IGKV3D-34-201ENST00000522638 PPLO60437 1756 aa9.4□□□□□ -0.91
IGKV3D-34-201ENST00000522638 ALS2Q96Q42 1657 aa9.39□□□□□ -0.91
IGKV3D-34-201ENST00000522638 NAIPQ13075 1403 aa9.39□□□□□ -0.91
IGKV3D-34-201ENST00000522638 A0A0G2JS52 829 aa9.38□□□□□ -0.91
IGKV3D-34-201ENST00000522638 MYT1Q01538 1121 aa9.38□□□□□ -0.91
IGKV3D-34-201ENST00000522638 VPS8Q8N3P4 1428 aa9.38□□□□□ -0.91
IGKV3D-34-201ENST00000522638 RRBP1Q9P2E9 1410 aaKnown RBP9.38□□□□□ -0.91
IGKV3D-34-201ENST00000522638 FAM83GA6ND36 823 aa9.37□□□□□ -0.91
IGKV3D-34-201ENST00000522638 TRIM37O94972 964 aa9.37□□□□□ -0.91
IGKV3D-34-201ENST00000522638 CABLES1Q8TDN4 633 aa9.37□□□□□ -0.91
IGKV3D-34-201ENST00000522638 PEAK1Q9H792 1746 aa9.36□□□□□ -0.91
IGKV3D-34-201ENST00000522638 DLC1Q96QB1 1528 aa9.36□□□□□ -0.91
IGKV3D-34-201ENST00000522638 SPATA31A5Q5VU36 1347 aa9.36□□□□□ -0.91
IGKV3D-34-201ENST00000522638 SPATA31A7Q8IWB4 1347 aa9.36□□□□□ -0.91
IGKV3D-34-201ENST00000522638 GOLGB1Q14789 3259 aaKnown RBP9.36□□□□□ -0.91
IGKV3D-34-201ENST00000522638 APBA3O96018 575 aa9.35□□□□□ -0.91
IGKV3D-34-201ENST00000522638 TECPR2O15040 1411 aa9.34□□□□□ -0.91
IGKV3D-34-201ENST00000522638 GIGYF1O75420 1035 aaPredicted RBP9.34□□□□□ -0.91
IGKV3D-34-201ENST00000522638 PTGER2P43116 358 aa9.34□□□□□ -0.91
IGKV3D-34-201ENST00000522638 NBPF8Q3BBV2 869 aa9.34□□□□□ -0.91
IGKV3D-34-201ENST00000522638 NBPF14Q5TI25 921 aa9.34□□□□□ -0.91
IGKV3D-34-201ENST00000522638 SBNO1A3KN83 1393 aa9.34□□□□□ -0.91
IGKV3D-34-201ENST00000522638 NRXN1Q9ULB1 1477 aa9.34□□□□□ -0.91
IGKV3D-34-201ENST00000522638 PARP4Q9UKK3 1724 aaKnown RBP9.34□□□□□ -0.92
IGKV3D-34-201ENST00000522638 FAM196AQ6ZSG2 479 aa9.33□□□□□ -0.92
IGKV3D-34-201ENST00000522638 KRT28Q7Z3Y7 464 aa9.33□□□□□ -0.92
IGKV3D-34-201ENST00000522638 BTG4Q9NY30 223 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms