RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 EMID1Q96A84 441 aaPredicted RBP10.05□□□□□ -0.8
HMGB1P1-201ENST00000522557 USB1Q9BQ65 265 aaKnown RBP10.05□□□□□ -0.8
HMGB1P1-201ENST00000522557 KDM4CQ9H3R0 1056 aa10.05□□□□□ -0.8
HMGB1P1-201ENST00000522557 BRPF1P55201 1214 aaPredicted RBP10.04□□□□□ -0.8
HMGB1P1-201ENST00000522557 ANKLE1Q8NAG6 615 aa10.04□□□□□ -0.8
HMGB1P1-201ENST00000522557 MSS51Q4VC12 460 aa10.03□□□□□ -0.8
HMGB1P1-201ENST00000522557 PLA2G2CQ5R387 149 aa10.03□□□□□ -0.8
HMGB1P1-201ENST00000522557 PCDHB15Q9Y5E8 787 aa10.03□□□□□ -0.8
HMGB1P1-201ENST00000522557 DIXDC1Q155Q3 683 aa10.02□□□□□ -0.81
HMGB1P1-201ENST00000522557 RSBN1LQ6PCB5 846 aaPredicted RBP10.02□□□□□ -0.81
HMGB1P1-201ENST00000522557 C6orf229H3BNL8 230 aa10.01□□□□□ -0.81
HMGB1P1-201ENST00000522557 LIAT1Q6ZQX7 453 aa10.01□□□□□ -0.81
HMGB1P1-201ENST00000522557 RIC3Q7Z5B4 369 aa10.01□□□□□ -0.81
HMGB1P1-201ENST00000522557 FAM117AQ9C073 453 aa10.01□□□□□ -0.81
HMGB1P1-201ENST00000522557 V9GY48 417 aaPredicted RBP10.01□□□□□ -0.81
HMGB1P1-201ENST00000522557 SPTLC1O15269 473 aa10□□□□□ -0.81
HMGB1P1-201ENST00000522557 SLC19A1P41440 591 aa10□□□□□ -0.81
HMGB1P1-201ENST00000522557 MYSM1Q5VVJ2 828 aa10□□□□□ -0.81
HMGB1P1-201ENST00000522557 FCF1Q9Y324 198 aaKnown RBP10□□□□□ -0.81
HMGB1P1-201ENST00000522557 RETREG3Q86VR2 466 aa9.99□□□□□ -0.81
HMGB1P1-201ENST00000522557 MMP16P51512 607 aa9.98□□□□□ -0.81
HMGB1P1-201ENST00000522557 LIMD1Q9UGP4 676 aa9.98□□□□□ -0.81
HMGB1P1-201ENST00000522557 DXOO77932 396 aaKnown RBP9.97□□□□□ -0.81
HMGB1P1-201ENST00000522557 GJA5P36382 358 aa9.97□□□□□ -0.81
HMGB1P1-201ENST00000522557 CSPP1Q1MSJ5 1256 aa9.97□□□□□ -0.81
HMGB1P1-201ENST00000522557 MTMR2Q13614 643 aa9.96□□□□□ -0.82
HMGB1P1-201ENST00000522557 NEUROD2Q15784 382 aa9.96□□□□□ -0.82
HMGB1P1-201ENST00000522557 POLR3EQ9NVU0 708 aa9.96□□□□□ -0.82
HMGB1P1-201ENST00000522557 PLEKHG3A1L390 1219 aa9.95□□□□□ -0.82
HMGB1P1-201ENST00000522557 SPRYD7Q5W111 196 aa9.95□□□□□ -0.82
HMGB1P1-201ENST00000522557 IRX2Q9BZI1 471 aaPredicted RBP9.95□□□□□ -0.82
HMGB1P1-201ENST00000522557 JUNDP17535 347 aa9.94□□□□□ -0.82
HMGB1P1-201ENST00000522557 HRCP23327 699 aa9.94□□□□□ -0.82
HMGB1P1-201ENST00000522557 PRR7Q8TB68 274 aa9.94□□□□□ -0.82
HMGB1P1-201ENST00000522557 CABLES1Q8TDN4 633 aa9.94□□□□□ -0.82
HMGB1P1-201ENST00000522557 RSPH6AQ9H0K4 717 aa9.94□□□□□ -0.82
HMGB1P1-201ENST00000522557 TIMELESSQ9UNS1 1208 aa9.94□□□□□ -0.82
HMGB1P1-201ENST00000522557 DDRGK1Q96HY6 314 aa9.93□□□□□ -0.82
HMGB1P1-201ENST00000522557 GTF3C3Q9Y5Q9 886 aa9.93□□□□□ -0.82
HMGB1P1-201ENST00000522557 QPCTQ16769 361 aa9.92□□□□□ -0.82
HMGB1P1-201ENST00000522557 CCDC24Q8N4L8 307 aa9.92□□□□□ -0.82
HMGB1P1-201ENST00000522557 SPDYE5A6NIY4 337 aa9.91□□□□□ -0.82
HMGB1P1-201ENST00000522557 CLK2P49760 499 aaKnown RBP9.91□□□□□ -0.82
HMGB1P1-201ENST00000522557 ZNF598Q86UK7 904 aaKnown RBP9.91□□□□□ -0.82
HMGB1P1-201ENST00000522557 ZBTB3Q9H5J0 574 aa9.91□□□□□ -0.82
HMGB1P1-201ENST00000522557 CFAP99D6REC4 459 aa9.9□□□□□ -0.82
HMGB1P1-201ENST00000522557 RPIAP49247 311 aa9.9□□□□□ -0.82
HMGB1P1-201ENST00000522557 TUSC1Q2TAM9 212 aa9.9□□□□□ -0.82
HMGB1P1-201ENST00000522557 ZNF697Q5TEC3 545 aa9.9□□□□□ -0.82
HMGB1P1-201ENST00000522557 PRPF38BQ5VTL8 546 aaKnown RBP9.9□□□□□ -0.82
HMGB1P1-201ENST00000522557 IL27Q8NEV9 243 aa9.9□□□□□ -0.82
HMGB1P1-201ENST00000522557 NUTM2BA6NNL0 878 aaPredicted RBP9.89□□□□□ -0.83
HMGB1P1-201ENST00000522557 NUTM2EB1AL46 878 aaPredicted RBP9.89□□□□□ -0.83
HMGB1P1-201ENST00000522557 GFRA3O60609 400 aa9.89□□□□□ -0.83
HMGB1P1-201ENST00000522557 LILRB3O75022 631 aa9.89□□□□□ -0.83
HMGB1P1-201ENST00000522557 SKIV2LQ15477 1246 aaKnown RBP9.89□□□□□ -0.83
HMGB1P1-201ENST00000522557 RTL5Q5HYW3 569 aaPredicted RBP9.89□□□□□ -0.83
HMGB1P1-201ENST00000522557 NUTM2DQ5VT03 806 aaPredicted RBP9.89□□□□□ -0.83
HMGB1P1-201ENST00000522557 NUTM2AQ8IVF1 878 aaPredicted RBP9.89□□□□□ -0.83
HMGB1P1-201ENST00000522557 PROCA1Q8NCQ7 364 aaPredicted RBP9.89□□□□□ -0.83
HMGB1P1-201ENST00000522557 ZBTB24O43167 697 aaPredicted RBP9.88□□□□□ -0.83
HMGB1P1-201ENST00000522557 SH3D19Q5HYK7 790 aa9.88□□□□□ -0.83
HMGB1P1-201ENST00000522557 TRIM67Q6ZTA4 783 aa9.88□□□□□ -0.83
HMGB1P1-201ENST00000522557 NUDT12Q9BQG2 462 aa9.88□□□□□ -0.83
HMGB1P1-201ENST00000522557 CD2BP2O95400 341 aaKnown RBP9.87□□□□□ -0.83
HMGB1P1-201ENST00000522557 FBXO31Q5XUX0 539 aaPredicted RBP9.87□□□□□ -0.83
HMGB1P1-201ENST00000522557 PTCRAQ6ISU1 281 aaPredicted RBP9.87□□□□□ -0.83
HMGB1P1-201ENST00000522557 PDZRN3Q9UPQ7 1066 aa9.87□□□□□ -0.83
HMGB1P1-201ENST00000522557 DESI1Q6ICB0 168 aa9.86□□□□□ -0.83
HMGB1P1-201ENST00000522557 ATP1B4Q9UN42 357 aaPredicted RBP9.85□□□□□ -0.83
HMGB1P1-201ENST00000522557 GDF9O60383 454 aa9.84□□□□□ -0.83
HMGB1P1-201ENST00000522557 CCNYL3P0C7X3 344 aa9.84□□□□□ -0.83
HMGB1P1-201ENST00000522557 FOXC1Q12948 553 aa9.84□□□□□ -0.83
HMGB1P1-201ENST00000522557 PTPRNQ16849 979 aa9.84□□□□□ -0.83
HMGB1P1-201ENST00000522557 LYPD8Q6UX82 237 aa9.84□□□□□ -0.83
HMGB1P1-201ENST00000522557 TSC1Q92574 1164 aa9.84□□□□□ -0.83
HMGB1P1-201ENST00000522557 EVA1BQ9NVM1 165 aa9.84□□□□□ -0.83
HMGB1P1-201ENST00000522557 TNFRSF10AO00220 468 aa9.83□□□□□ -0.84
HMGB1P1-201ENST00000522557 TRIM32Q13049 653 aa9.83□□□□□ -0.84
HMGB1P1-201ENST00000522557 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.83□□□□□ -0.84
HMGB1P1-201ENST00000522557 PKD2L1Q9P0L9 805 aa9.83□□□□□ -0.84
HMGB1P1-201ENST00000522557 PER1O15534 1290 aaPredicted RBP9.82□□□□□ -0.84
HMGB1P1-201ENST00000522557 NRG2O14511 850 aaPredicted RBP9.8□□□□□ -0.84
HMGB1P1-201ENST00000522557 KCNH2Q12809 1159 aa9.8□□□□□ -0.84
HMGB1P1-201ENST00000522557 LAPTM4AQ15012 233 aa9.8□□□□□ -0.84
HMGB1P1-201ENST00000522557 CTHP32929 405 aa9.79□□□□□ -0.84
HMGB1P1-201ENST00000522557 SKOR1P84550 965 aa9.79□□□□□ -0.84
HMGB1P1-201ENST00000522557 PRR20EP86478 221 aa9.79□□□□□ -0.84
HMGB1P1-201ENST00000522557 PRR20CP86479 221 aa9.79□□□□□ -0.84
HMGB1P1-201ENST00000522557 PRR20DP86480 221 aa9.79□□□□□ -0.84
HMGB1P1-201ENST00000522557 PRR20BP86481 221 aa9.79□□□□□ -0.84
HMGB1P1-201ENST00000522557 PRR20AP86496 221 aa9.79□□□□□ -0.84
HMGB1P1-201ENST00000522557 CTDSPL2Q05D32 466 aa9.78□□□□□ -0.84
HMGB1P1-201ENST00000522557 Q6ZNB5 142 aa9.78□□□□□ -0.84
HMGB1P1-201ENST00000522557 UNC93B1Q9H1C4 597 aa9.78□□□□□ -0.84
HMGB1P1-201ENST00000522557 PPP2R2DQ66LE6 453 aa9.77□□□□□ -0.85
HMGB1P1-201ENST00000522557 MAP10Q9P2G4 905 aa9.77□□□□□ -0.85
HMGB1P1-201ENST00000522557 F12P00748 615 aaPredicted RBP9.76□□□□□ -0.85
HMGB1P1-201ENST00000522557 HELBQ8NG08 1087 aaPredicted RBP9.76□□□□□ -0.85
HMGB1P1-201ENST00000522557 BAP1Q92560 729 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms