RNA–Protein interactions for RNA: ENST00000522321.5

SPIDR-219, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 760 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-219ENST00000522321 ROBO2Q9HCK4 1378 aa17.16■□□□□ 0.34
SPIDR-219ENST00000522321 XRN1Q8IZH2 1706 aaKnown RBP17.16■□□□□ 0.34
SPIDR-219ENST00000522321 KCNA6P17658 529 aa17.16■□□□□ 0.34
SPIDR-219ENST00000522321 POLR3GLQ9BT43 218 aa17.16■□□□□ 0.34
SPIDR-219ENST00000522321 NWD1Q149M9 1564 aa17.15■□□□□ 0.34
SPIDR-219ENST00000522321 NKTRP30414 1462 aaKnown RBP17.15■□□□□ 0.34
SPIDR-219ENST00000522321 SBNO2Q9Y2G9 1366 aa17.15■□□□□ 0.34
SPIDR-219ENST00000522321 QRICH2Q9H0J4 1663 aa17.14■□□□□ 0.33
SPIDR-219ENST00000522321 WAPLQ7Z5K2 1190 aa17.14■□□□□ 0.33
SPIDR-219ENST00000522321 SIRT1Q96EB6 747 aa17.14■□□□□ 0.33
SPIDR-219ENST00000522321 PHF23Q9BUL5 403 aaPredicted RBP17.14■□□□□ 0.33
SPIDR-219ENST00000522321 CDCA8Q53HL2 280 aa17.13■□□□□ 0.33
SPIDR-219ENST00000522321 C14orf37Q86TY3 774 aa17.13■□□□□ 0.33
SPIDR-219ENST00000522321 MINK1Q8N4C8 1332 aaPredicted RBP17.13■□□□□ 0.33
SPIDR-219ENST00000522321 PLEKHH1Q9ULM0 1364 aa17.13■□□□□ 0.33
SPIDR-219ENST00000522321 TESK2Q96S53 571 aa17.11■□□□□ 0.33
SPIDR-219ENST00000522321 EVC2Q86UK5 1308 aa17.11■□□□□ 0.33
SPIDR-219ENST00000522321 PROSER2Q86WR7 435 aaPredicted RBP17.1■□□□□ 0.33
SPIDR-219ENST00000522321 CHD2O14647 1828 aaKnown RBP17.09■□□□□ 0.33
SPIDR-219ENST00000522321 SRPK2P78362 688 aaKnown RBP17.08■□□□□ 0.32
SPIDR-219ENST00000522321 CCDC7Q96M83 1385 aa17.07■□□□□ 0.32
SPIDR-219ENST00000522321 KIF7Q2M1P5 1343 aa17.07■□□□□ 0.32
SPIDR-219ENST00000522321 TULP4Q9NRJ4 1543 aa17.06■□□□□ 0.32
SPIDR-219ENST00000522321 WASHC2AQ641Q2 1341 aa17.05■□□□□ 0.32
SPIDR-219ENST00000522321 ADGRB2O60241 1585 aa17.05■□□□□ 0.32
SPIDR-219ENST00000522321 ADGRL3Q9HAR2 1447 aa17.04■□□□□ 0.32
SPIDR-219ENST00000522321 TMEM94Q12767 1356 aa17.04■□□□□ 0.32
SPIDR-219ENST00000522321 MED1Q15648 1581 aaPredicted RBP17.04■□□□□ 0.32
SPIDR-219ENST00000522321 ATAD2Q6PL18 1390 aa17.03■□□□□ 0.32
SPIDR-219ENST00000522321 WASLO00401 505 aaPredicted RBP17.03■□□□□ 0.32
SPIDR-219ENST00000522321 RBM33Q96EV2 1170 aaKnown RBP17.03■□□□□ 0.32
SPIDR-219ENST00000522321 C11orf95C9JLR9 678 aaPredicted RBP17.02■□□□□ 0.32
SPIDR-219ENST00000522321 CDK19Q9BWU1 502 aa17.02■□□□□ 0.32
SPIDR-219ENST00000522321 CABP2Q9NPB3 220 aa17.02■□□□□ 0.32
SPIDR-219ENST00000522321 NCOA3Q9Y6Q9 1424 aa17.01■□□□□ 0.31
SPIDR-219ENST00000522321 CDC42BPGQ6DT37 1551 aa17.01■□□□□ 0.31
SPIDR-219ENST00000522321 MSH6P52701 1360 aa17.01■□□□□ 0.31
SPIDR-219ENST00000522321 TMC1Q8TDI8 760 aa17■□□□□ 0.31
SPIDR-219ENST00000522321 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.99■□□□□ 0.31
SPIDR-219ENST00000522321 PUS7Q96PZ0 661 aaKnown RBP16.99■□□□□ 0.31
SPIDR-219ENST00000522321 LRRC7Q96NW7 1537 aa16.99■□□□□ 0.31
SPIDR-219ENST00000522321 NALCNQ8IZF0 1738 aa16.99■□□□□ 0.31
SPIDR-219ENST00000522321 ATF3P18847 181 aa16.98■□□□□ 0.31
SPIDR-219ENST00000522321 NINLQ9Y2I6 1382 aa16.98■□□□□ 0.31
SPIDR-219ENST00000522321 STRCP1A6NGW2 1772 aa16.97■□□□□ 0.31
SPIDR-219ENST00000522321 DDX10Q13206 875 aaKnown RBP16.97■□□□□ 0.31
SPIDR-219ENST00000522321 C19orf44Q9H6X5 657 aa16.97■□□□□ 0.31
SPIDR-219ENST00000522321 DCCP43146 1447 aa16.96■□□□□ 0.31
SPIDR-219ENST00000522321 NUTM2FA1L443 756 aa16.96■□□□□ 0.31
SPIDR-219ENST00000522321 ANKARQ7Z5J8 1434 aa16.96■□□□□ 0.3
SPIDR-219ENST00000522321 NUDT16Q96DE0 195 aaKnown RBP16.95■□□□□ 0.3
SPIDR-219ENST00000522321 ATP7BP35670 1465 aa16.94■□□□□ 0.3
SPIDR-219ENST00000522321 CADPS2Q86UW7 1296 aa16.94■□□□□ 0.3
SPIDR-219ENST00000522321 PPIP5K1Q6PFW1 1433 aa16.94■□□□□ 0.3
SPIDR-219ENST00000522321 HDGFL2Q7Z4V5 671 aaPredicted RBP16.92■□□□□ 0.3
SPIDR-219ENST00000522321 CCDC61Q9Y6R9 512 aa16.92■□□□□ 0.3
SPIDR-219ENST00000522321 FMN2Q9NZ56 1722 aa16.91■□□□□ 0.3
SPIDR-219ENST00000522321 TERF2IPQ9NYB0 399 aa16.91■□□□□ 0.3
SPIDR-219ENST00000522321 PRR36Q9H6K5 1346 aa16.91■□□□□ 0.3
SPIDR-219ENST00000522321 DIEXFQ68CQ4 756 aaKnown RBP16.9■□□□□ 0.3
SPIDR-219ENST00000522321 ANKRD36BQ8N2N9 1353 aa16.89■□□□□ 0.3
SPIDR-219ENST00000522321 MYOM1P52179 1685 aa16.89■□□□□ 0.29
SPIDR-219ENST00000522321 SLC12A5Q9H2X9 1139 aa16.89■□□□□ 0.29
SPIDR-219ENST00000522321 PANK3Q9H999 370 aa16.89■□□□□ 0.29
SPIDR-219ENST00000522321 CABP1Q9NZU7 370 aa16.89■□□□□ 0.29
SPIDR-219ENST00000522321 ESCO1Q5FWF5 840 aa16.88■□□□□ 0.29
SPIDR-219ENST00000522321 ITSN1Q15811 1721 aa16.87■□□□□ 0.29
SPIDR-219ENST00000522321 NGDNQ8NEJ9 315 aaKnown RBP16.87■□□□□ 0.29
SPIDR-219ENST00000522321 MST1RQ04912 1400 aa16.87■□□□□ 0.29
SPIDR-219ENST00000522321 TOPAZ1Q8N9V7 1692 aa16.86■□□□□ 0.29
SPIDR-219ENST00000522321 KNSTRNQ9Y448 316 aa16.86■□□□□ 0.29
SPIDR-219ENST00000522321 A0A1W2PP64 1363 aa16.86■□□□□ 0.29
SPIDR-219ENST00000522321 C1orf167Q5SNV9 1468 aa16.86■□□□□ 0.29
SPIDR-219ENST00000522321 USP32Q8NFA0 1604 aa16.85■□□□□ 0.29
SPIDR-219ENST00000522321 PMFBP1Q8TBY8 1022 aa16.85■□□□□ 0.29
SPIDR-219ENST00000522321 PHF8Q9UPP1 1060 aa16.85■□□□□ 0.29
SPIDR-219ENST00000522321 NSD3Q9BZ95 1437 aa16.85■□□□□ 0.29
SPIDR-219ENST00000522321 KTN1Q86UP2 1357 aaKnown RBP16.84■□□□□ 0.29
SPIDR-219ENST00000522321 PLEKHG3A1L390 1219 aa16.83■□□□□ 0.28
SPIDR-219ENST00000522321 ACEP12821 1306 aa16.83■□□□□ 0.28
SPIDR-219ENST00000522321 XIRP1Q702N8 1843 aaKnown RBP16.82■□□□□ 0.28
SPIDR-219ENST00000522321 ANP32CO43423 234 aa16.81■□□□□ 0.28
SPIDR-219ENST00000522321 CNGB1Q14028 1251 aaPredicted RBP16.81■□□□□ 0.28
SPIDR-219ENST00000522321 ZNF692Q9BU19 519 aaPredicted RBP16.81■□□□□ 0.28
SPIDR-219ENST00000522321 KIF1AQ12756 1690 aa16.81■□□□□ 0.28
SPIDR-219ENST00000522321 CGNL1Q0VF96 1302 aa16.8■□□□□ 0.28
SPIDR-219ENST00000522321 ORAI2Q96SN7 254 aa16.8■□□□□ 0.28
SPIDR-219ENST00000522321 SLAIN2Q9P270 581 aa16.8■□□□□ 0.28
SPIDR-219ENST00000522321 CD163L1Q9NR16 1453 aa16.8■□□□□ 0.28
SPIDR-219ENST00000522321 CPSF1Q10570 1443 aaKnown RBP16.79■□□□□ 0.28
SPIDR-219ENST00000522321 EDC4Q6P2E9 1401 aaKnown RBP16.79■□□□□ 0.28
SPIDR-219ENST00000522321 POLR3AO14802 1390 aaPredicted RBP16.79■□□□□ 0.28
SPIDR-219ENST00000522321 USP6P35125 1406 aa16.79■□□□□ 0.28
SPIDR-219ENST00000522321 PSME1Q06323 249 aa16.78■□□□□ 0.28
SPIDR-219ENST00000522321 RGS17Q9UGC6 210 aaPredicted RBP16.78■□□□□ 0.28
SPIDR-219ENST00000522321 NPHP3Q7Z494 1330 aa16.77■□□□□ 0.28
SPIDR-219ENST00000522321 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.77■□□□□ 0.28
SPIDR-219ENST00000522321 CC2D1BQ5T0F9 858 aaKnown RBP16.76■□□□□ 0.27
SPIDR-219ENST00000522321 CARD14Q9BXL6 1004 aa16.76■□□□□ 0.27
SPIDR-219ENST00000522321 NSD2O96028 1365 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms