RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 ABCC11Q96J66 1382 aa30.47■■■□□ 2.47
SDCBP-209ENST00000522243 PLEKHH1Q9ULM0 1364 aa30.47■■■□□ 2.47
SDCBP-209ENST00000522243 CFAP70Q5T0N1 1121 aa30.47■■■□□ 2.47
SDCBP-209ENST00000522243 C14orf93Q9H972 538 aaKnown RBP30.47■■■□□ 2.47
SDCBP-209ENST00000522243 YTHDC2Q9H6S0 1430 aaKnown RBP30.47■■■□□ 2.47
SDCBP-209ENST00000522243 MYOM2P54296 1465 aa30.46■■■□□ 2.47
SDCBP-209ENST00000522243 CDC42BPGQ6DT37 1551 aa30.45■■■□□ 2.47
SDCBP-209ENST00000522243 NRXN1Q9ULB1 1477 aa30.45■■■□□ 2.47
SDCBP-209ENST00000522243 HRCP23327 699 aa30.43■■■□□ 2.46
SDCBP-209ENST00000522243 NUTM2FA1L443 756 aa30.42■■■□□ 2.46
SDCBP-209ENST00000522243 LAMC1P11047 1609 aa30.42■■■□□ 2.46
SDCBP-209ENST00000522243 PNPLA6Q8IY17 1366 aa30.41■■■□□ 2.46
SDCBP-209ENST00000522243 ESCO1Q5FWF5 840 aa30.41■■■□□ 2.46
SDCBP-209ENST00000522243 KDM2AQ9Y2K7 1162 aa30.39■■■□□ 2.46
SDCBP-209ENST00000522243 SOS2Q07890 1332 aaPredicted RBP30.39■■■□□ 2.46
SDCBP-209ENST00000522243 DHX57Q6P158 1386 aaKnown RBP30.39■■■□□ 2.45
SDCBP-209ENST00000522243 ZNF772Q68DY9 489 aaPredicted RBP30.37■■■□□ 2.45
SDCBP-209ENST00000522243 DCAF11Q8TEB1 546 aa30.34■■■□□ 2.45
SDCBP-209ENST00000522243 FMN2Q9NZ56 1722 aa30.33■■■□□ 2.45
SDCBP-209ENST00000522243 SIRT1Q96EB6 747 aa30.33■■■□□ 2.45
SDCBP-209ENST00000522243 SAFB2Q14151 953 aaKnown RBP eCLIP30.32■■■□□ 2.44
SDCBP-209ENST00000522243 AFF2P51816 1311 aa30.31■■■□□ 2.44
SDCBP-209ENST00000522243 FOXO3O43524 673 aa30.31■■■□□ 2.44
SDCBP-209ENST00000522243 XPCQ01831 940 aaPredicted RBP30.31■■■□□ 2.44
SDCBP-209ENST00000522243 C8orf37Q96NL8 207 aa30.31■■■□□ 2.44
SDCBP-209ENST00000522243 NPHP3Q7Z494 1330 aa30.3■■■□□ 2.44
SDCBP-209ENST00000522243 ADAMTS2O95450 1211 aa30.29■■■□□ 2.44
SDCBP-209ENST00000522243 PRAM1Q96QH2 718 aa30.29■■■□□ 2.44
SDCBP-209ENST00000522243 RGPD8O14715 1765 aaPredicted RBP30.27■■■□□ 2.44
SDCBP-209ENST00000522243 ADGRB1O14514 1584 aa30.26■■■□□ 2.43
SDCBP-209ENST00000522243 PXDNQ92626 1479 aa30.25■■■□□ 2.43
SDCBP-209ENST00000522243 POGKQ9P215 609 aa30.25■■■□□ 2.43
SDCBP-209ENST00000522243 TRAK1Q9UPV9 953 aa30.25■■■□□ 2.43
SDCBP-209ENST00000522243 DLC1Q96QB1 1528 aa30.24■■■□□ 2.43
SDCBP-209ENST00000522243 RXRBP28702 533 aa30.22■■■□□ 2.43
SDCBP-209ENST00000522243 COL22A1Q8NFW1 1626 aaPredicted RBP30.22■■■□□ 2.43
SDCBP-209ENST00000522243 NGLY1Q96IV0 654 aa30.21■■■□□ 2.43
SDCBP-209ENST00000522243 KIF1AQ12756 1690 aa30.2■■■□□ 2.43
SDCBP-209ENST00000522243 STAC3Q96MF2 364 aa30.18■■■□□ 2.42
SDCBP-209ENST00000522243 HIRIP3Q9BW71 556 aaPredicted RBP30.16■■■□□ 2.42
SDCBP-209ENST00000522243 QTRT2Q9H974 415 aaKnown RBP30.16■■■□□ 2.42
SDCBP-209ENST00000522243 PHF8Q9UPP1 1060 aa30.16■■■□□ 2.42
SDCBP-209ENST00000522243 KRT28Q7Z3Y7 464 aa30.15■■■□□ 2.42
SDCBP-209ENST00000522243 MINK1Q8N4C8 1332 aaPredicted RBP30.14■■■□□ 2.42
SDCBP-209ENST00000522243 USP32Q8NFA0 1604 aa30.12■■■□□ 2.41
SDCBP-209ENST00000522243 ADGRB2O60241 1585 aa30.11■■■□□ 2.41
SDCBP-209ENST00000522243 USP21Q9UK80 565 aa30.11■■■□□ 2.41
SDCBP-209ENST00000522243 SPATA31A3Q5VYP0 1347 aa30.11■■■□□ 2.41
SDCBP-209ENST00000522243 PMFBP1Q8TBY8 1022 aa30.09■■■□□ 2.41
SDCBP-209ENST00000522243 MARF1Q9Y4F3 1742 aaKnown RBP30.09■■■□□ 2.41
SDCBP-209ENST00000522243 RBM6P78332 1123 aaKnown RBP30.08■■■□□ 2.41
SDCBP-209ENST00000522243 ARHGEF28Q8N1W1 1705 aaKnown RBP30.08■■■□□ 2.41
SDCBP-209ENST00000522243 CDK12Q9NYV4 1490 aaPredicted RBP30.07■■■□□ 2.4
SDCBP-209ENST00000522243 ANKARQ7Z5J8 1434 aa30.05■■■□□ 2.4
SDCBP-209ENST00000522243 PLEKHG5O94827 1062 aa30.05■■■□□ 2.4
SDCBP-209ENST00000522243 PSME1Q06323 249 aa30.05■■■□□ 2.4
SDCBP-209ENST00000522243 FNBP4Q8N3X1 1017 aaPredicted RBP30.05■■■□□ 2.4
SDCBP-209ENST00000522243 PRR36Q9H6K5 1346 aa30.03■■■□□ 2.4
SDCBP-209ENST00000522243 WASLO00401 505 aaPredicted RBP30.03■■■□□ 2.4
SDCBP-209ENST00000522243 RGS12O14924 1447 aa30.03■■■□□ 2.4
SDCBP-209ENST00000522243 LMOD2Q6P5Q4 547 aa30.02■■■□□ 2.4
SDCBP-209ENST00000522243 TRPC5Q9UL62 973 aaPredicted RBP30.02■■■□□ 2.4
SDCBP-209ENST00000522243 TNS3Q68CZ2 1445 aa30.02■■■□□ 2.4
SDCBP-209ENST00000522243 KIAA1210Q9ULL0 1709 aa30.01■■■□□ 2.39
SDCBP-209ENST00000522243 UPF1Q92900 1129 aaKnown RBP eCLIP30■■■□□ 2.39
SDCBP-209ENST00000522243 TULP4Q9NRJ4 1543 aa30■■■□□ 2.39
SDCBP-209ENST00000522243 NBPF1Q3BBV0 1214 aa29.99■■■□□ 2.39
SDCBP-209ENST00000522243 CABLES1Q8TDN4 633 aa29.99■■■□□ 2.39
SDCBP-209ENST00000522243 SBNO1A3KN83 1393 aa29.99■■■□□ 2.39
SDCBP-209ENST00000522243 EIF3AQ14152 1382 aaKnown RBP29.99■■■□□ 2.39
SDCBP-209ENST00000522243 HAP1P54257 671 aaPredicted RBP29.97■■■□□ 2.39
SDCBP-209ENST00000522243 SIN3AQ96ST3 1273 aa29.97■■■□□ 2.39
SDCBP-209ENST00000522243 ATRNO75882 1429 aa29.96■■■□□ 2.39
SDCBP-209ENST00000522243 BCL9LQ86UU0 1499 aa29.96■■■□□ 2.39
SDCBP-209ENST00000522243 TRPM3Q9HCF6 1732 aaPredicted RBP29.93■■■□□ 2.38
SDCBP-209ENST00000522243 L3MBTL2Q969R5 705 aa29.92■■■□□ 2.38
SDCBP-209ENST00000522243 ARHGEF10O15013 1369 aa29.91■■■□□ 2.38
SDCBP-209ENST00000522243 GPRASP1Q5JY77 1395 aa29.91■■■□□ 2.38
SDCBP-209ENST00000522243 ABCA3Q99758 1704 aa29.91■■■□□ 2.38
SDCBP-209ENST00000522243 NEUROD1Q13562 356 aa29.91■■■□□ 2.38
SDCBP-209ENST00000522243 NGDNQ8NEJ9 315 aaKnown RBP29.91■■■□□ 2.38
SDCBP-209ENST00000522243 NUDT16Q96DE0 195 aaKnown RBP29.9■■■□□ 2.38
SDCBP-209ENST00000522243 ITSN1Q15811 1721 aa29.89■■■□□ 2.38
SDCBP-209ENST00000522243 CDK19Q9BWU1 502 aa29.89■■■□□ 2.38
SDCBP-209ENST00000522243 ATP7BP35670 1465 aa29.88■■■□□ 2.37
SDCBP-209ENST00000522243 SLIT2O94813 1529 aa29.88■■■□□ 2.37
SDCBP-209ENST00000522243 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.88■■■□□ 2.37
SDCBP-209ENST00000522243 ALS2Q96Q42 1657 aa29.86■■■□□ 2.37
SDCBP-209ENST00000522243 UNC5CLQ8IV45 518 aa29.86■■■□□ 2.37
SDCBP-209ENST00000522243 GJD4Q96KN9 370 aaPredicted RBP29.86■■■□□ 2.37
SDCBP-209ENST00000522243 PAK3O75914 559 aaPredicted RBP29.84■■■□□ 2.37
SDCBP-209ENST00000522243 PLCH1Q4KWH8 1693 aa29.83■■■□□ 2.37
SDCBP-209ENST00000522243 CENPJQ9HC77 1338 aaPredicted RBP29.8■■■□□ 2.36
SDCBP-209ENST00000522243 GLI3P10071 1580 aa29.8■■■□□ 2.36
SDCBP-209ENST00000522243 TOPAZ1Q8N9V7 1692 aa29.79■■■□□ 2.36
SDCBP-209ENST00000522243 RALGAPBQ86X10 1494 aa29.79■■■□□ 2.36
SDCBP-209ENST00000522243 FAM83GA6ND36 823 aa29.78■■■□□ 2.36
SDCBP-209ENST00000522243 TRPM1Q7Z4N2 1603 aa29.78■■■□□ 2.36
SDCBP-209ENST00000522243 ATAD2Q6PL18 1390 aa29.77■■■□□ 2.36
SDCBP-209ENST00000522243 NWD2Q9ULI1 1742 aa29.77■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms