RNA–Protein interactions for RNA: ENST00000521977.1

SHPRH-209, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 927 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-209ENST00000521977 SETD1AO15047 1707 aaKnown RBP13.33□□□□□ -0.27
SHPRH-209ENST00000521977 TESK2Q96S53 571 aa13.33□□□□□ -0.28
SHPRH-209ENST00000521977 KIF7Q2M1P5 1343 aa13.32□□□□□ -0.28
SHPRH-209ENST00000521977 EIF3AQ14152 1382 aaKnown RBP13.32□□□□□ -0.28
SHPRH-209ENST00000521977 THEMISQ8N1K5 641 aaPredicted RBP13.31□□□□□ -0.28
SHPRH-209ENST00000521977 PLEKHG1Q9ULL1 1385 aa13.31□□□□□ -0.28
SHPRH-209ENST00000521977 LTKP29376 864 aa13.29□□□□□ -0.28
SHPRH-209ENST00000521977 DDX10Q13206 875 aaKnown RBP13.29□□□□□ -0.28
SHPRH-209ENST00000521977 TMEM132EQ6IEE7 984 aa13.29□□□□□ -0.28
SHPRH-209ENST00000521977 SBNO2Q9Y2G9 1366 aa13.29□□□□□ -0.28
SHPRH-209ENST00000521977 ARHGEF28Q8N1W1 1705 aaKnown RBP13.28□□□□□ -0.28
SHPRH-209ENST00000521977 MED14O60244 1454 aa13.28□□□□□ -0.28
SHPRH-209ENST00000521977 ADAMTS13Q76LX8 1427 aa13.27□□□□□ -0.29
SHPRH-209ENST00000521977 YTHDC2Q9H6S0 1430 aaKnown RBP13.27□□□□□ -0.29
SHPRH-209ENST00000521977 SPDYE4A6NLX3 237 aa13.26□□□□□ -0.29
SHPRH-209ENST00000521977 SLC24A1O60721 1099 aa13.26□□□□□ -0.29
SHPRH-209ENST00000521977 TMF1P82094 1093 aa13.26□□□□□ -0.29
SHPRH-209ENST00000521977 TXNDC2Q86VQ3 553 aa13.26□□□□□ -0.29
SHPRH-209ENST00000521977 DLC1Q96QB1 1528 aa13.26□□□□□ -0.29
SHPRH-209ENST00000521977 DISP3Q9P2K9 1392 aa13.26□□□□□ -0.29
SHPRH-209ENST00000521977 TRAK1Q9UPV9 953 aa13.26□□□□□ -0.29
SHPRH-209ENST00000521977 EID1Q9Y6B2 187 aa13.26□□□□□ -0.29
SHPRH-209ENST00000521977 LRPPRCP42704 1394 aaKnown RBP13.25□□□□□ -0.29
SHPRH-209ENST00000521977 CENPJQ9HC77 1338 aaPredicted RBP13.25□□□□□ -0.29
SHPRH-209ENST00000521977 KDM4FA0A1W2PPD8 638 aa13.25□□□□□ -0.29
SHPRH-209ENST00000521977 DIP2AQ14689 1571 aa13.24□□□□□ -0.29
SHPRH-209ENST00000521977 ABCC11Q96J66 1382 aa13.24□□□□□ -0.29
SHPRH-209ENST00000521977 KNDC1Q76NI1 1749 aa13.24□□□□□ -0.29
SHPRH-209ENST00000521977 QRICH2Q9H0J4 1663 aa13.24□□□□□ -0.29
SHPRH-209ENST00000521977 TECPR2O15040 1411 aa13.23□□□□□ -0.29
SHPRH-209ENST00000521977 METP08581 1390 aa13.23□□□□□ -0.29
SHPRH-209ENST00000521977 C19orf67A6NJJ6 358 aa13.21□□□□□ -0.29
SHPRH-209ENST00000521977 MIER1Q8N108 512 aa13.21□□□□□ -0.29
SHPRH-209ENST00000521977 SIRT1Q96EB6 747 aa13.21□□□□□ -0.29
SHPRH-209ENST00000521977 TBX22Q9Y458 520 aa13.21□□□□□ -0.29
SHPRH-209ENST00000521977 CPS1P31327 1500 aa13.2□□□□□ -0.3
SHPRH-209ENST00000521977 CDCA8Q53HL2 280 aa13.2□□□□□ -0.3
SHPRH-209ENST00000521977 ANKLE2Q86XL3 938 aa13.2□□□□□ -0.3
SHPRH-209ENST00000521977 PUS7Q96PZ0 661 aaKnown RBP13.19□□□□□ -0.3
SHPRH-209ENST00000521977 STK26Q9P289 416 aa13.19□□□□□ -0.3
SHPRH-209ENST00000521977 FAM135BQ49AJ0 1406 aa13.19□□□□□ -0.3
SHPRH-209ENST00000521977 EVX2Q03828 476 aa13.18□□□□□ -0.3
SHPRH-209ENST00000521977 CHADLQ6NUI6 762 aa13.18□□□□□ -0.3
SHPRH-209ENST00000521977 PTPRUQ92729 1446 aa13.18□□□□□ -0.3
SHPRH-209ENST00000521977 TULP4Q9NRJ4 1543 aa13.18□□□□□ -0.3
SHPRH-209ENST00000521977 BCANQ96GW7 911 aa13.17□□□□□ -0.3
SHPRH-209ENST00000521977 PRAM1Q96QH2 718 aa13.17□□□□□ -0.3
SHPRH-209ENST00000521977 MYOM1P52179 1685 aa13.17□□□□□ -0.3
SHPRH-209ENST00000521977 PIK3R4Q99570 1358 aa13.17□□□□□ -0.3
SHPRH-209ENST00000521977 SLC26A8Q96RN1 970 aa13.16□□□□□ -0.3
SHPRH-209ENST00000521977 POLR3GLQ9BT43 218 aa13.16□□□□□ -0.3
SHPRH-209ENST00000521977 XRN1Q8IZH2 1706 aaKnown RBP13.15□□□□□ -0.3
SHPRH-209ENST00000521977 EVC2Q86UK5 1308 aa13.14□□□□□ -0.31
SHPRH-209ENST00000521977 NPHP4O75161 1426 aaPredicted RBP13.14□□□□□ -0.31
SHPRH-209ENST00000521977 PTCH1Q13635 1447 aa13.14□□□□□ -0.31
SHPRH-209ENST00000521977 POGKQ9P215 609 aa13.14□□□□□ -0.31
SHPRH-209ENST00000521977 PLEKHH1Q9ULM0 1364 aa13.14□□□□□ -0.31
SHPRH-209ENST00000521977 ROBO2Q9HCK4 1378 aa13.13□□□□□ -0.31
SHPRH-209ENST00000521977 ANP32CO43423 234 aa13.13□□□□□ -0.31
SHPRH-209ENST00000521977 WAPLQ7Z5K2 1190 aa13.13□□□□□ -0.31
SHPRH-209ENST00000521977 LMTK3Q96Q04 1460 aa13.12□□□□□ -0.31
SHPRH-209ENST00000521977 PER1O15534 1290 aaPredicted RBP13.12□□□□□ -0.31
SHPRH-209ENST00000521977 CHD2O14647 1828 aaKnown RBP13.11□□□□□ -0.31
SHPRH-209ENST00000521977 SAFB2Q14151 953 aaKnown RBP eCLIP13.11□□□□□ -0.31
SHPRH-209ENST00000521977 AMOTL2Q9Y2J4 779 aa13.11□□□□□ -0.31
SHPRH-209ENST00000521977 ADGRB2O60241 1585 aa13.11□□□□□ -0.31
SHPRH-209ENST00000521977 NCKAP5LQ9HCH0 1330 aa13.11□□□□□ -0.31
SHPRH-209ENST00000521977 PANK3Q9H999 370 aa13.1□□□□□ -0.31
SHPRH-209ENST00000521977 FARP1Q9Y4F1 1045 aaPredicted RBP13.1□□□□□ -0.31
SHPRH-209ENST00000521977 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.1□□□□□ -0.31
SHPRH-209ENST00000521977 MINK1Q8N4C8 1332 aaPredicted RBP13.1□□□□□ -0.31
SHPRH-209ENST00000521977 PRKRIP1Q9H875 184 aaPredicted RBP13.09□□□□□ -0.31
SHPRH-209ENST00000521977 ATAD2Q6PL18 1390 aa13.08□□□□□ -0.31
SHPRH-209ENST00000521977 NINLQ9Y2I6 1382 aa13.08□□□□□ -0.31
SHPRH-209ENST00000521977 NWD1Q149M9 1564 aa13.08□□□□□ -0.32
SHPRH-209ENST00000521977 CCER2I3L3R5 266 aa13.08□□□□□ -0.32
SHPRH-209ENST00000521977 CDK19Q9BWU1 502 aa13.07□□□□□ -0.32
SHPRH-209ENST00000521977 CABP2Q9NPB3 220 aa13.07□□□□□ -0.32
SHPRH-209ENST00000521977 KTN1Q86UP2 1357 aaKnown RBP13.07□□□□□ -0.32
SHPRH-209ENST00000521977 WASLO00401 505 aaPredicted RBP13.06□□□□□ -0.32
SHPRH-209ENST00000521977 KCNA6P17658 529 aa13.06□□□□□ -0.32
SHPRH-209ENST00000521977 NPC1L1Q9UHC9 1359 aa13.06□□□□□ -0.32
SHPRH-209ENST00000521977 SRPK2P78362 688 aaKnown RBP13.05□□□□□ -0.32
SHPRH-209ENST00000521977 STRCQ7RTU9 1775 aa13.04□□□□□ -0.32
SHPRH-209ENST00000521977 HSPA2P54652 639 aa13.04□□□□□ -0.32
SHPRH-209ENST00000521977 SLC12A5Q9H2X9 1139 aa13.04□□□□□ -0.32
SHPRH-209ENST00000521977 ANKRD36BQ8N2N9 1353 aa13.04□□□□□ -0.32
SHPRH-209ENST00000521977 AMER1Q5JTC6 1135 aaPredicted RBP13.03□□□□□ -0.32
SHPRH-209ENST00000521977 PROM2Q8N271 834 aa13.03□□□□□ -0.32
SHPRH-209ENST00000521977 CARD14Q9BXL6 1004 aa13.03□□□□□ -0.32
SHPRH-209ENST00000521977 PARD3Q8TEW0 1356 aa13.03□□□□□ -0.32
SHPRH-209ENST00000521977 CD163L1Q9NR16 1453 aa13.03□□□□□ -0.32
SHPRH-209ENST00000521977 USP32Q8NFA0 1604 aa13.02□□□□□ -0.32
SHPRH-209ENST00000521977 RALBP1Q15311 655 aa13.02□□□□□ -0.33
SHPRH-209ENST00000521977 CREBZFQ9NS37 354 aa13.02□□□□□ -0.33
SHPRH-209ENST00000521977 KNSTRNQ9Y448 316 aa13.02□□□□□ -0.33
SHPRH-209ENST00000521977 ATP7BP35670 1465 aa13.02□□□□□ -0.33
SHPRH-209ENST00000521977 TMC1Q8TDI8 760 aa13.01□□□□□ -0.33
SHPRH-209ENST00000521977 NKTRP30414 1462 aaKnown RBP13.01□□□□□ -0.33
SHPRH-209ENST00000521977 TOPAZ1Q8N9V7 1692 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms