RNA–Protein interactions for RNA: ENST00000521865.5

PABPC1-218, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-218ENST00000521865 QTRT2Q9H974 415 aaKnown RBP30.96■■■□□ 2.55
PABPC1-218ENST00000521865 TMEM132EQ6IEE7 984 aa30.95■■■□□ 2.55
PABPC1-218ENST00000521865 WAPLQ7Z5K2 1190 aa30.95■■■□□ 2.55
PABPC1-218ENST00000521865 UPF1Q92900 1129 aaKnown RBP eCLIP30.95■■■□□ 2.55
PABPC1-218ENST00000521865 LRPPRCP42704 1394 aaKnown RBP30.92■■■□□ 2.54
PABPC1-218ENST00000521865 NUTM2FA1L443 756 aa30.92■■■□□ 2.54
PABPC1-218ENST00000521865 NPHP3Q7Z494 1330 aa30.92■■■□□ 2.54
PABPC1-218ENST00000521865 ACIN1Q9UKV3 1341 aaKnown RBP30.92■■■□□ 2.54
PABPC1-218ENST00000521865 CDK12Q9NYV4 1490 aaPredicted RBP30.91■■■□□ 2.54
PABPC1-218ENST00000521865 RBM6P78332 1123 aaKnown RBP30.91■■■□□ 2.54
PABPC1-218ENST00000521865 CDC42BPGQ6DT37 1551 aa30.9■■■□□ 2.54
PABPC1-218ENST00000521865 LAMC1P11047 1609 aa30.89■■■□□ 2.54
PABPC1-218ENST00000521865 ABCC11Q96J66 1382 aa30.88■■■□□ 2.53
PABPC1-218ENST00000521865 TECPR2O15040 1411 aa30.88■■■□□ 2.53
PABPC1-218ENST00000521865 PIK3C2GO75747 1445 aa30.88■■■□□ 2.53
PABPC1-218ENST00000521865 FOXO3O43524 673 aa30.87■■■□□ 2.53
PABPC1-218ENST00000521865 XPCQ01831 940 aaPredicted RBP30.87■■■□□ 2.53
PABPC1-218ENST00000521865 PLEKHH1Q9ULM0 1364 aa30.85■■■□□ 2.53
PABPC1-218ENST00000521865 USP21Q9UK80 565 aa30.85■■■□□ 2.53
PABPC1-218ENST00000521865 YTHDC2Q9H6S0 1430 aaKnown RBP30.83■■■□□ 2.53
PABPC1-218ENST00000521865 RGS12O14924 1447 aa30.82■■■□□ 2.52
PABPC1-218ENST00000521865 IFT172Q9UG01 1749 aa30.82■■■□□ 2.52
PABPC1-218ENST00000521865 C14orf93Q9H972 538 aaKnown RBP30.79■■■□□ 2.52
PABPC1-218ENST00000521865 TRPC5Q9UL62 973 aaPredicted RBP30.79■■■□□ 2.52
PABPC1-218ENST00000521865 PXDNQ92626 1479 aa30.78■■■□□ 2.52
PABPC1-218ENST00000521865 CFAP70Q5T0N1 1121 aa30.77■■■□□ 2.52
PABPC1-218ENST00000521865 FNBP4Q8N3X1 1017 aaPredicted RBP30.77■■■□□ 2.52
PABPC1-218ENST00000521865 RAB3GAP2Q9H2M9 1393 aa30.77■■■□□ 2.52
PABPC1-218ENST00000521865 DHX57Q6P158 1386 aaKnown RBP30.76■■■□□ 2.51
PABPC1-218ENST00000521865 KNDC1Q76NI1 1749 aa30.75■■■□□ 2.51
PABPC1-218ENST00000521865 MYOM2P54296 1465 aa30.75■■■□□ 2.51
PABPC1-218ENST00000521865 SIRT1Q96EB6 747 aa30.74■■■□□ 2.51
PABPC1-218ENST00000521865 COL22A1Q8NFW1 1626 aaPredicted RBP30.73■■■□□ 2.51
PABPC1-218ENST00000521865 SAFB2Q14151 953 aaKnown RBP eCLIP30.72■■■□□ 2.51
PABPC1-218ENST00000521865 PRAM1Q96QH2 718 aa30.7■■■□□ 2.51
PABPC1-218ENST00000521865 NRXN1Q9ULB1 1477 aa30.7■■■□□ 2.5
PABPC1-218ENST00000521865 KRT28Q7Z3Y7 464 aa30.69■■■□□ 2.5
PABPC1-218ENST00000521865 POGKQ9P215 609 aa30.68■■■□□ 2.5
PABPC1-218ENST00000521865 SPATA31A3Q5VYP0 1347 aa30.67■■■□□ 2.5
PABPC1-218ENST00000521865 FMN2Q9NZ56 1722 aa30.67■■■□□ 2.5
PABPC1-218ENST00000521865 ATRNO75882 1429 aa30.66■■■□□ 2.5
PABPC1-218ENST00000521865 PHF8Q9UPP1 1060 aa30.66■■■□□ 2.5
PABPC1-218ENST00000521865 ATAD2Q6PL18 1390 aa30.66■■■□□ 2.5
PABPC1-218ENST00000521865 HAP1P54257 671 aaPredicted RBP30.65■■■□□ 2.5
PABPC1-218ENST00000521865 PSME1Q06323 249 aa30.64■■■□□ 2.5
PABPC1-218ENST00000521865 KIF1AQ12756 1690 aa30.63■■■□□ 2.49
PABPC1-218ENST00000521865 PLEKHG5O94827 1062 aa30.63■■■□□ 2.49
PABPC1-218ENST00000521865 KDM2AQ9Y2K7 1162 aa30.63■■■□□ 2.49
PABPC1-218ENST00000521865 BCL9LQ86UU0 1499 aa30.62■■■□□ 2.49
PABPC1-218ENST00000521865 LMOD2Q6P5Q4 547 aa30.6■■■□□ 2.49
PABPC1-218ENST00000521865 DCAF11Q8TEB1 546 aa30.59■■■□□ 2.49
PABPC1-218ENST00000521865 GJD4Q96KN9 370 aaPredicted RBP30.59■■■□□ 2.49
PABPC1-218ENST00000521865 TRAK1Q9UPV9 953 aa30.59■■■□□ 2.49
PABPC1-218ENST00000521865 TNS3Q68CZ2 1445 aa30.56■■■□□ 2.48
PABPC1-218ENST00000521865 UNC5CLQ8IV45 518 aa30.56■■■□□ 2.48
PABPC1-218ENST00000521865 PMFBP1Q8TBY8 1022 aa30.56■■■□□ 2.48
PABPC1-218ENST00000521865 DLC1Q96QB1 1528 aa30.54■■■□□ 2.48
PABPC1-218ENST00000521865 CABLES1Q8TDN4 633 aa30.54■■■□□ 2.48
PABPC1-218ENST00000521865 HIRIP3Q9BW71 556 aaPredicted RBP30.54■■■□□ 2.48
PABPC1-218ENST00000521865 MINK1Q8N4C8 1332 aaPredicted RBP30.51■■■□□ 2.48
PABPC1-218ENST00000521865 MARF1Q9Y4F3 1742 aaKnown RBP30.51■■■□□ 2.47
PABPC1-218ENST00000521865 SBNO1A3KN83 1393 aa30.51■■■□□ 2.47
PABPC1-218ENST00000521865 ANKARQ7Z5J8 1434 aa30.5■■■□□ 2.47
PABPC1-218ENST00000521865 ADGRB1O14514 1584 aa30.49■■■□□ 2.47
PABPC1-218ENST00000521865 SLIT2O94813 1529 aa30.49■■■□□ 2.47
PABPC1-218ENST00000521865 ARHGEF10O15013 1369 aa30.49■■■□□ 2.47
PABPC1-218ENST00000521865 USP32Q8NFA0 1604 aa30.47■■■□□ 2.47
PABPC1-218ENST00000521865 STAC3Q96MF2 364 aa30.47■■■□□ 2.47
PABPC1-218ENST00000521865 RGPD8O14715 1765 aaPredicted RBP30.46■■■□□ 2.47
PABPC1-218ENST00000521865 RALGAPBQ86X10 1494 aa30.46■■■□□ 2.47
PABPC1-218ENST00000521865 EIF3AQ14152 1382 aaKnown RBP30.46■■■□□ 2.47
PABPC1-218ENST00000521865 HRCP23327 699 aa30.46■■■□□ 2.47
PABPC1-218ENST00000521865 CCDC9Q9Y3X0 531 aaKnown RBP30.46■■■□□ 2.47
PABPC1-218ENST00000521865 GPRASP1Q5JY77 1395 aa30.43■■■□□ 2.46
PABPC1-218ENST00000521865 ADGRB2O60241 1585 aa30.43■■■□□ 2.46
PABPC1-218ENST00000521865 WASLO00401 505 aaPredicted RBP30.42■■■□□ 2.46
PABPC1-218ENST00000521865 CCDC125Q86Z20 511 aa30.41■■■□□ 2.46
PABPC1-218ENST00000521865 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.41■■■□□ 2.46
PABPC1-218ENST00000521865 VPS72Q15906 364 aa30.4■■■□□ 2.46
PABPC1-218ENST00000521865 NGDNQ8NEJ9 315 aaKnown RBP30.39■■■□□ 2.46
PABPC1-218ENST00000521865 PRR36Q9H6K5 1346 aa30.39■■■□□ 2.46
PABPC1-218ENST00000521865 GLI3P10071 1580 aa30.38■■■□□ 2.45
PABPC1-218ENST00000521865 SEPT12Q8IYM1 358 aa30.37■■■□□ 2.45
PABPC1-218ENST00000521865 TULP4Q9NRJ4 1543 aa30.37■■■□□ 2.45
PABPC1-218ENST00000521865 PAK3O75914 559 aaPredicted RBP30.36■■■□□ 2.45
PABPC1-218ENST00000521865 ZRANB1Q9UGI0 708 aa30.36■■■□□ 2.45
PABPC1-218ENST00000521865 FAM83GA6ND36 823 aa30.35■■■□□ 2.45
PABPC1-218ENST00000521865 A0A0G2JS52 829 aa30.34■■■□□ 2.45
PABPC1-218ENST00000521865 MYT1Q01538 1121 aa30.34■■■□□ 2.45
PABPC1-218ENST00000521865 EP400Q96L91 3159 aa30.31■■■□□ 2.44
PABPC1-218ENST00000521865 BTG4Q9NY30 223 aa30.3■■■□□ 2.44
PABPC1-218ENST00000521865 PLCH1Q4KWH8 1693 aa30.3■■■□□ 2.44
PABPC1-218ENST00000521865 SF3B2Q13435 895 aaKnown RBP30.29■■■□□ 2.44
PABPC1-218ENST00000521865 NUDT16Q96DE0 195 aaKnown RBP30.29■■■□□ 2.44
PABPC1-218ENST00000521865 ABCA3Q99758 1704 aa30.28■■■□□ 2.44
PABPC1-218ENST00000521865 BLMP54132 1417 aaPredicted RBP30.28■■■□□ 2.44
PABPC1-218ENST00000521865 NWD2Q9ULI1 1742 aa30.27■■■□□ 2.44
PABPC1-218ENST00000521865 KRT27Q7Z3Y8 459 aa30.26■■■□□ 2.43
PABPC1-218ENST00000521865 TRPM3Q9HCF6 1732 aaPredicted RBP30.26■■■□□ 2.43
PABPC1-218ENST00000521865 ONECUT3O60422 494 aaPredicted RBP30.25■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms