RNA–Protein interactions for RNA: ENST00000521836.1

TCEA1-209, Transcript of transcription elongation factor A1, humanhuman

TSL 4

Gene TCEA1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA1-209ENST00000521836 SOS2Q07890 1332 aaPredicted RBP35.73■■■■□ 3.31
TCEA1-209ENST00000521836 RAB3GAP2Q9H2M9 1393 aa35.73■■■■□ 3.31
TCEA1-209ENST00000521836 CDC42BPGQ6DT37 1551 aa35.72■■■■□ 3.31
TCEA1-209ENST00000521836 RXRBP28702 533 aa35.71■■■■□ 3.31
TCEA1-209ENST00000521836 SIRT1Q96EB6 747 aa35.7■■■■□ 3.31
TCEA1-209ENST00000521836 NPHP3Q7Z494 1330 aa35.69■■■■□ 3.3
TCEA1-209ENST00000521836 ESCO1Q5FWF5 840 aa35.69■■■■□ 3.3
TCEA1-209ENST00000521836 C14orf93Q9H972 538 aaKnown RBP35.68■■■■□ 3.3
TCEA1-209ENST00000521836 AFF2P51816 1311 aa35.67■■■■□ 3.3
TCEA1-209ENST00000521836 TMEM132EQ6IEE7 984 aa35.67■■■■□ 3.3
TCEA1-209ENST00000521836 HRCP23327 699 aa35.65■■■■□ 3.3
TCEA1-209ENST00000521836 WAPLQ7Z5K2 1190 aa35.65■■■■□ 3.3
TCEA1-209ENST00000521836 YTHDC2Q9H6S0 1430 aaKnown RBP35.65■■■■□ 3.3
TCEA1-209ENST00000521836 DHX57Q6P158 1386 aaKnown RBP35.64■■■■□ 3.3
TCEA1-209ENST00000521836 KNDC1Q76NI1 1749 aa35.64■■■■□ 3.3
TCEA1-209ENST00000521836 C8orf37Q96NL8 207 aa35.64■■■■□ 3.3
TCEA1-209ENST00000521836 MYOM2P54296 1465 aa35.64■■■■□ 3.3
TCEA1-209ENST00000521836 NRXN1Q9ULB1 1477 aa35.6■■■■□ 3.29
TCEA1-209ENST00000521836 CDK12Q9NYV4 1490 aaPredicted RBP35.6■■■■□ 3.29
TCEA1-209ENST00000521836 NGLY1Q96IV0 654 aa35.59■■■■□ 3.29
TCEA1-209ENST00000521836 STAC3Q96MF2 364 aa35.59■■■■□ 3.29
TCEA1-209ENST00000521836 ADAMTS2O95450 1211 aa35.56■■■■□ 3.28
TCEA1-209ENST00000521836 CFAP70Q5T0N1 1121 aa35.55■■■■□ 3.28
TCEA1-209ENST00000521836 QTRT2Q9H974 415 aaKnown RBP35.55■■■■□ 3.28
TCEA1-209ENST00000521836 FOXO3O43524 673 aa35.54■■■■□ 3.28
TCEA1-209ENST00000521836 RBM6P78332 1123 aaKnown RBP35.53■■■■□ 3.28
TCEA1-209ENST00000521836 PLEKHH1Q9ULM0 1364 aa35.52■■■■□ 3.28
TCEA1-209ENST00000521836 NUTM2FA1L443 756 aa35.49■■■■□ 3.27
TCEA1-209ENST00000521836 COL22A1Q8NFW1 1626 aaPredicted RBP35.49■■■■□ 3.27
TCEA1-209ENST00000521836 PXDNQ92626 1479 aa35.48■■■■□ 3.27
TCEA1-209ENST00000521836 POGKQ9P215 609 aa35.46■■■■□ 3.27
TCEA1-209ENST00000521836 USP21Q9UK80 565 aa35.45■■■■□ 3.27
TCEA1-209ENST00000521836 KIF1AQ12756 1690 aa35.45■■■■□ 3.27
TCEA1-209ENST00000521836 FMN2Q9NZ56 1722 aa35.45■■■■□ 3.27
TCEA1-209ENST00000521836 FNBP4Q8N3X1 1017 aaPredicted RBP35.44■■■■□ 3.26
TCEA1-209ENST00000521836 PRAM1Q96QH2 718 aa35.44■■■■□ 3.26
TCEA1-209ENST00000521836 TRPC5Q9UL62 973 aaPredicted RBP35.44■■■■□ 3.26
TCEA1-209ENST00000521836 DLC1Q96QB1 1528 aa35.42■■■■□ 3.26
TCEA1-209ENST00000521836 PSME1Q06323 249 aa35.42■■■■□ 3.26
TCEA1-209ENST00000521836 DCAF11Q8TEB1 546 aa35.42■■■■□ 3.26
TCEA1-209ENST00000521836 XPCQ01831 940 aaPredicted RBP35.41■■■■□ 3.26
TCEA1-209ENST00000521836 UPF1Q92900 1129 aaKnown RBP eCLIP35.41■■■■□ 3.26
TCEA1-209ENST00000521836 PHF8Q9UPP1 1060 aa35.39■■■■□ 3.26
TCEA1-209ENST00000521836 KDM2AQ9Y2K7 1162 aa35.38■■■■□ 3.25
TCEA1-209ENST00000521836 KRT28Q7Z3Y7 464 aa35.37■■■■□ 3.25
TCEA1-209ENST00000521836 SPATA31A3Q5VYP0 1347 aa35.36■■■■□ 3.25
TCEA1-209ENST00000521836 SAFB2Q14151 953 aaKnown RBP eCLIP35.35■■■■□ 3.25
TCEA1-209ENST00000521836 EIF3AQ14152 1382 aaKnown RBP35.34■■■■□ 3.25
TCEA1-209ENST00000521836 TRAK1Q9UPV9 953 aa35.32■■■■□ 3.24
TCEA1-209ENST00000521836 ANKARQ7Z5J8 1434 aa35.32■■■■□ 3.24
TCEA1-209ENST00000521836 ADGRB1O14514 1584 aa35.31■■■■□ 3.24
TCEA1-209ENST00000521836 RGS12O14924 1447 aa35.31■■■■□ 3.24
TCEA1-209ENST00000521836 SBNO1A3KN83 1393 aa35.27■■■■□ 3.24
TCEA1-209ENST00000521836 HAP1P54257 671 aaPredicted RBP35.27■■■■□ 3.24
TCEA1-209ENST00000521836 MARF1Q9Y4F3 1742 aaKnown RBP35.26■■■■□ 3.24
TCEA1-209ENST00000521836 ATRNO75882 1429 aa35.26■■■■□ 3.24
TCEA1-209ENST00000521836 ADGRB2O60241 1585 aa35.25■■■■□ 3.23
TCEA1-209ENST00000521836 TNS3Q68CZ2 1445 aa35.25■■■■□ 3.23
TCEA1-209ENST00000521836 ARHGEF10O15013 1369 aa35.25■■■■□ 3.23
TCEA1-209ENST00000521836 RGPD8O14715 1765 aaPredicted RBP35.23■■■■□ 3.23
TCEA1-209ENST00000521836 ATAD2Q6PL18 1390 aa35.22■■■■□ 3.23
TCEA1-209ENST00000521836 BCL9LQ86UU0 1499 aa35.22■■■■□ 3.23
TCEA1-209ENST00000521836 MINK1Q8N4C8 1332 aaPredicted RBP35.19■■■■□ 3.22
TCEA1-209ENST00000521836 GPRASP1Q5JY77 1395 aa35.18■■■■□ 3.22
TCEA1-209ENST00000521836 WASLO00401 505 aaPredicted RBP35.18■■■■□ 3.22
TCEA1-209ENST00000521836 LMOD2Q6P5Q4 547 aa35.18■■■■□ 3.22
TCEA1-209ENST00000521836 UNC5CLQ8IV45 518 aa35.18■■■■□ 3.22
TCEA1-209ENST00000521836 GJD4Q96KN9 370 aaPredicted RBP35.18■■■■□ 3.22
TCEA1-209ENST00000521836 HIRIP3Q9BW71 556 aaPredicted RBP35.18■■■■□ 3.22
TCEA1-209ENST00000521836 PMFBP1Q8TBY8 1022 aa35.17■■■■□ 3.22
TCEA1-209ENST00000521836 TULP4Q9NRJ4 1543 aa35.13■■■■□ 3.21
TCEA1-209ENST00000521836 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.12■■■■□ 3.21
TCEA1-209ENST00000521836 SLIT2O94813 1529 aa35.12■■■■□ 3.21
TCEA1-209ENST00000521836 USP32Q8NFA0 1604 aa35.12■■■■□ 3.21
TCEA1-209ENST00000521836 NGDNQ8NEJ9 315 aaKnown RBP35.08■■■■□ 3.21
TCEA1-209ENST00000521836 CCDC125Q86Z20 511 aa35.07■■■■□ 3.2
TCEA1-209ENST00000521836 CABLES1Q8TDN4 633 aa35.06■■■■□ 3.2
TCEA1-209ENST00000521836 KIAA1210Q9ULL0 1709 aa35.04■■■■□ 3.2
TCEA1-209ENST00000521836 PRR36Q9H6K5 1346 aa35.04■■■■□ 3.2
TCEA1-209ENST00000521836 ARHGEF28Q8N1W1 1705 aaKnown RBP35.03■■■■□ 3.2
TCEA1-209ENST00000521836 VPS72Q15906 364 aa35.02■■■■□ 3.2
TCEA1-209ENST00000521836 RALGAPBQ86X10 1494 aa35.01■■■■□ 3.19
TCEA1-209ENST00000521836 PLEKHG5O94827 1062 aa35■■■■□ 3.19
TCEA1-209ENST00000521836 NUDT16Q96DE0 195 aaKnown RBP35■■■■□ 3.19
TCEA1-209ENST00000521836 NWD2Q9ULI1 1742 aa34.99■■■■□ 3.19
TCEA1-209ENST00000521836 ITSN1Q15811 1721 aa34.98■■■■□ 3.19
TCEA1-209ENST00000521836 PAK3O75914 559 aaPredicted RBP34.97■■■■□ 3.19
TCEA1-209ENST00000521836 CDK19Q9BWU1 502 aa34.97■■■■□ 3.19
TCEA1-209ENST00000521836 TRPM3Q9HCF6 1732 aaPredicted RBP34.97■■■■□ 3.19
TCEA1-209ENST00000521836 CCDC9Q9Y3X0 531 aaKnown RBP34.96■■■■□ 3.19
TCEA1-209ENST00000521836 FAM83GA6ND36 823 aa34.95■■■■□ 3.19
TCEA1-209ENST00000521836 CCDC61Q9Y6R9 512 aa34.94■■■■□ 3.18
TCEA1-209ENST00000521836 ABCA3Q99758 1704 aa34.94■■■■□ 3.18
TCEA1-209ENST00000521836 ALS2Q96Q42 1657 aa34.92■■■■□ 3.18
TCEA1-209ENST00000521836 GLI3P10071 1580 aa34.92■■■■□ 3.18
TCEA1-209ENST00000521836 ATP7BP35670 1465 aa34.92■■■■□ 3.18
TCEA1-209ENST00000521836 PLCH1Q4KWH8 1693 aa34.91■■■■□ 3.18
TCEA1-209ENST00000521836 ONECUT3O60422 494 aaPredicted RBP34.9■■■■□ 3.18
TCEA1-209ENST00000521836 NBPF1Q3BBV0 1214 aa34.89■■■■□ 3.18
TCEA1-209ENST00000521836 SEPT12Q8IYM1 358 aa34.89■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms