RNA–Protein interactions for RNA: ENST00000521782.1

TNIP1-212, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 4

Gene TNIP1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-212ENST00000521782 VGFO15240 615 aaPredicted RBP23.52■■□□□ 1.36
TNIP1-212ENST00000521782 STAC3Q96MF2 364 aa23.52■■□□□ 1.36
TNIP1-212ENST00000521782 LAMC1P11047 1609 aa23.51■■□□□ 1.35
TNIP1-212ENST00000521782 C8orf37Q96NL8 207 aa23.51■■□□□ 1.35
TNIP1-212ENST00000521782 NEXMIFQ5QGS0 1516 aa23.5■■□□□ 1.35
TNIP1-212ENST00000521782 TIMELESSQ9UNS1 1208 aa23.5■■□□□ 1.35
TNIP1-212ENST00000521782 RBM6P78332 1123 aaKnown RBP23.49■■□□□ 1.35
TNIP1-212ENST00000521782 DCAF11Q8TEB1 546 aa23.49■■□□□ 1.35
TNIP1-212ENST00000521782 QTRT2Q9H974 415 aaKnown RBP23.49■■□□□ 1.35
TNIP1-212ENST00000521782 KDM2AQ9Y2K7 1162 aa23.47■■□□□ 1.35
TNIP1-212ENST00000521782 C1orf167Q5SNV9 1468 aa23.46■■□□□ 1.35
TNIP1-212ENST00000521782 L3MBTL2Q969R5 705 aa23.46■■□□□ 1.35
TNIP1-212ENST00000521782 PPLO60437 1756 aa23.43■■□□□ 1.34
TNIP1-212ENST00000521782 EP400Q96L91 3159 aa23.41■■□□□ 1.34
TNIP1-212ENST00000521782 PTCH1Q13635 1447 aa23.41■■□□□ 1.34
TNIP1-212ENST00000521782 ADAMTS2O95450 1211 aa23.4■■□□□ 1.34
TNIP1-212ENST00000521782 IFT172Q9UG01 1749 aa23.39■■□□□ 1.34
TNIP1-212ENST00000521782 SOS2Q07890 1332 aaPredicted RBP23.39■■□□□ 1.34
TNIP1-212ENST00000521782 MYOM2P54296 1465 aa23.39■■□□□ 1.34
TNIP1-212ENST00000521782 NGLY1Q96IV0 654 aa23.39■■□□□ 1.33
TNIP1-212ENST00000521782 COL22A1Q8NFW1 1626 aaPredicted RBP23.39■■□□□ 1.33
TNIP1-212ENST00000521782 PRAG1Q86YV5 1406 aa23.37■■□□□ 1.33
TNIP1-212ENST00000521782 ATAD2Q6PL18 1390 aa23.37■■□□□ 1.33
TNIP1-212ENST00000521782 ROBO2Q9HCK4 1378 aa23.37■■□□□ 1.33
TNIP1-212ENST00000521782 ADGRF5Q8IZF2 1346 aa23.36■■□□□ 1.33
TNIP1-212ENST00000521782 ORAI2Q96SN7 254 aa23.36■■□□□ 1.33
TNIP1-212ENST00000521782 USP21Q9UK80 565 aa23.34■■□□□ 1.33
TNIP1-212ENST00000521782 ATRNO75882 1429 aa23.33■■□□□ 1.33
TNIP1-212ENST00000521782 FNBP4Q8N3X1 1017 aaPredicted RBP23.33■■□□□ 1.33
TNIP1-212ENST00000521782 ZEB1P37275 1124 aaPredicted RBP23.31■■□□□ 1.32
TNIP1-212ENST00000521782 TRPC5Q9UL62 973 aaPredicted RBP23.31■■□□□ 1.32
TNIP1-212ENST00000521782 MARF1Q9Y4F3 1742 aaKnown RBP23.3■■□□□ 1.32
TNIP1-212ENST00000521782 NRXN1Q9ULB1 1477 aa23.3■■□□□ 1.32
TNIP1-212ENST00000521782 PIK3C2GO75747 1445 aa23.29■■□□□ 1.32
TNIP1-212ENST00000521782 C14orf93Q9H972 538 aaKnown RBP23.27■■□□□ 1.32
TNIP1-212ENST00000521782 BCL9LQ86UU0 1499 aa23.27■■□□□ 1.32
TNIP1-212ENST00000521782 PXDNQ92626 1479 aa23.27■■□□□ 1.32
TNIP1-212ENST00000521782 CDC42BPGQ6DT37 1551 aa23.27■■□□□ 1.32
TNIP1-212ENST00000521782 CFAP70Q5T0N1 1121 aa23.25■■□□□ 1.31
TNIP1-212ENST00000521782 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.22■■□□□ 1.31
TNIP1-212ENST00000521782 NBPF8Q3BBV2 869 aa23.21■■□□□ 1.31
TNIP1-212ENST00000521782 NPHP3Q7Z494 1330 aa23.21■■□□□ 1.31
TNIP1-212ENST00000521782 KIAA1210Q9ULL0 1709 aa23.2■■□□□ 1.3
TNIP1-212ENST00000521782 ZRANB1Q9UGI0 708 aa23.2■■□□□ 1.3
TNIP1-212ENST00000521782 ROCK2O75116 1388 aaKnown RBP23.18■■□□□ 1.3
TNIP1-212ENST00000521782 ESCO1Q5FWF5 840 aa23.17■■□□□ 1.3
TNIP1-212ENST00000521782 GLI3P10071 1580 aa23.17■■□□□ 1.3
TNIP1-212ENST00000521782 TMEM132EQ6IEE7 984 aa23.16■■□□□ 1.3
TNIP1-212ENST00000521782 CCDC125Q86Z20 511 aa23.16■■□□□ 1.3
TNIP1-212ENST00000521782 TRPM1Q7Z4N2 1603 aa23.15■■□□□ 1.3
TNIP1-212ENST00000521782 XPCQ01831 940 aaPredicted RBP23.15■■□□□ 1.3
TNIP1-212ENST00000521782 GJD4Q96KN9 370 aaPredicted RBP23.15■■□□□ 1.3
TNIP1-212ENST00000521782 FOXO3O43524 673 aa23.14■■□□□ 1.29
TNIP1-212ENST00000521782 SLIT2O94813 1529 aa23.13■■□□□ 1.29
TNIP1-212ENST00000521782 RALGAPBQ86X10 1494 aa23.13■■□□□ 1.29
TNIP1-212ENST00000521782 NBPF1Q3BBV0 1214 aa23.13■■□□□ 1.29
TNIP1-212ENST00000521782 CARD11Q9BXL7 1154 aa23.13■■□□□ 1.29
TNIP1-212ENST00000521782 STK26Q9P289 416 aa23.13■■□□□ 1.29
TNIP1-212ENST00000521782 TECPR2O15040 1411 aa23.13■■□□□ 1.29
TNIP1-212ENST00000521782 BRWD3Q6RI45 1802 aa23.12■■□□□ 1.29
TNIP1-212ENST00000521782 KNDC1Q76NI1 1749 aa23.11■■□□□ 1.29
TNIP1-212ENST00000521782 FMN2Q9NZ56 1722 aa23.11■■□□□ 1.29
TNIP1-212ENST00000521782 LRPPRCP42704 1394 aaKnown RBP23.11■■□□□ 1.29
TNIP1-212ENST00000521782 YTHDC2Q9H6S0 1430 aaKnown RBP23.1■■□□□ 1.29
TNIP1-212ENST00000521782 USP32Q8NFA0 1604 aa23.1■■□□□ 1.29
TNIP1-212ENST00000521782 KIF1AQ12756 1690 aa23.09■■□□□ 1.29
TNIP1-212ENST00000521782 BLMP54132 1417 aaPredicted RBP23.08■■□□□ 1.29
TNIP1-212ENST00000521782 ABCC11Q96J66 1382 aa23.08■■□□□ 1.29
TNIP1-212ENST00000521782 ADGRB1O14514 1584 aa23.08■■□□□ 1.29
TNIP1-212ENST00000521782 GPRASP1Q5JY77 1395 aa23.07■■□□□ 1.28
TNIP1-212ENST00000521782 PLEKHH1Q9ULM0 1364 aa23.07■■□□□ 1.28
TNIP1-212ENST00000521782 NUTM2FA1L443 756 aa23.07■■□□□ 1.28
TNIP1-212ENST00000521782 WAPLQ7Z5K2 1190 aa23.07■■□□□ 1.28
TNIP1-212ENST00000521782 UNC5CLQ8IV45 518 aa23.07■■□□□ 1.28
TNIP1-212ENST00000521782 TRAK1Q9UPV9 953 aa23.07■■□□□ 1.28
TNIP1-212ENST00000521782 SPATA31A3Q5VYP0 1347 aa23.07■■□□□ 1.28
TNIP1-212ENST00000521782 EIF3AQ14152 1382 aaKnown RBP23.05■■□□□ 1.28
TNIP1-212ENST00000521782 POGKQ9P215 609 aa23.05■■□□□ 1.28
TNIP1-212ENST00000521782 SIRT1Q96EB6 747 aa23.04■■□□□ 1.28
TNIP1-212ENST00000521782 PLCH1Q4KWH8 1693 aa23.03■■□□□ 1.28
TNIP1-212ENST00000521782 RGPD8O14715 1765 aaPredicted RBP23.03■■□□□ 1.28
TNIP1-212ENST00000521782 ABCA3Q99758 1704 aa23.02■■□□□ 1.28
TNIP1-212ENST00000521782 DEFB132Q7Z7B7 95 aa23.01■■□□□ 1.27
TNIP1-212ENST00000521782 NWD2Q9ULI1 1742 aa23.01■■□□□ 1.27
TNIP1-212ENST00000521782 LRP5O75197 1615 aa23■■□□□ 1.27
TNIP1-212ENST00000521782 DLC1Q96QB1 1528 aa23■■□□□ 1.27
TNIP1-212ENST00000521782 PRAM1Q96QH2 718 aa22.99■■□□□ 1.27
TNIP1-212ENST00000521782 TNS3Q68CZ2 1445 aa22.99■■□□□ 1.27
TNIP1-212ENST00000521782 EIF4G2P78344 907 aaKnown RBP eCLIP22.98■■□□□ 1.27
TNIP1-212ENST00000521782 KRT28Q7Z3Y7 464 aa22.97■■□□□ 1.27
TNIP1-212ENST00000521782 SEPT12Q8IYM1 358 aa22.96■■□□□ 1.27
TNIP1-212ENST00000521782 CENPJQ9HC77 1338 aaPredicted RBP22.96■■□□□ 1.27
TNIP1-212ENST00000521782 USP47Q96K76 1375 aa22.96■■□□□ 1.27
TNIP1-212ENST00000521782 SLC24A1O60721 1099 aa22.95■■□□□ 1.26
TNIP1-212ENST00000521782 VPS72Q15906 364 aa22.95■■□□□ 1.26
TNIP1-212ENST00000521782 SAFB2Q14151 953 aaKnown RBP eCLIP22.94■■□□□ 1.26
TNIP1-212ENST00000521782 ARHGEF28Q8N1W1 1705 aaKnown RBP22.94■■□□□ 1.26
TNIP1-212ENST00000521782 ONECUT3O60422 494 aaPredicted RBP22.93■■□□□ 1.26
TNIP1-212ENST00000521782 CABLES1Q8TDN4 633 aa22.93■■□□□ 1.26
TNIP1-212ENST00000521782 NRAPQ86VF7 1730 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms