RNA–Protein interactions for RNA: ENST00000521580.2

SMIM12-206, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM12, Length 3,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-206ENST00000521580 REREQ9P2R6 1566 aa18.51■□□□□ 0.55
SMIM12-206ENST00000521580 PLEKHH1Q9ULM0 1364 aa18.5■□□□□ 0.55
SMIM12-206ENST00000521580 PUS7Q96PZ0 661 aaKnown RBP18.5■□□□□ 0.55
SMIM12-206ENST00000521580 CLTCQ00610 1675 aaKnown RBP18.5■□□□□ 0.55
SMIM12-206ENST00000521580 APAF1O14727 1248 aa18.5■□□□□ 0.55
SMIM12-206ENST00000521580 TULP4Q9NRJ4 1543 aa18.49■□□□□ 0.55
SMIM12-206ENST00000521580 ARHGEF28Q8N1W1 1705 aaKnown RBP18.49■□□□□ 0.55
SMIM12-206ENST00000521580 YTHDC2Q9H6S0 1430 aaKnown RBP18.49■□□□□ 0.55
SMIM12-206ENST00000521580 GOLGA2Q08379 1002 aa18.48■□□□□ 0.55
SMIM12-206ENST00000521580 ANKRD36BQ8N2N9 1353 aa18.47■□□□□ 0.55
SMIM12-206ENST00000521580 EXOC6Q8TAG9 804 aa18.47■□□□□ 0.55
SMIM12-206ENST00000521580 PLIN1O60240 522 aa18.46■□□□□ 0.55
SMIM12-206ENST00000521580 A2ML1A8K2U0 1454 aa18.45■□□□□ 0.54
SMIM12-206ENST00000521580 ARHGEF40Q8TER5 1519 aa18.45■□□□□ 0.54
SMIM12-206ENST00000521580 ZMYM3Q14202 1370 aa18.45■□□□□ 0.54
SMIM12-206ENST00000521580 RIMS2Q9UQ26 1411 aa18.45■□□□□ 0.54
SMIM12-206ENST00000521580 MTHFSP49914 203 aa18.45■□□□□ 0.54
SMIM12-206ENST00000521580 POLR3AO14802 1390 aaPredicted RBP18.45■□□□□ 0.54
SMIM12-206ENST00000521580 KIF13AQ9H1H9 1805 aa18.45■□□□□ 0.54
SMIM12-206ENST00000521580 PTPRMP28827 1452 aa18.44■□□□□ 0.54
SMIM12-206ENST00000521580 ALKQ9UM73 1620 aa18.44■□□□□ 0.54
SMIM12-206ENST00000521580 DUSP27Q5VZP5 1158 aa18.43■□□□□ 0.54
SMIM12-206ENST00000521580 CFAP53Q96M91 514 aa18.43■□□□□ 0.54
SMIM12-206ENST00000521580 ZNF521Q96K83 1311 aa18.43■□□□□ 0.54
SMIM12-206ENST00000521580 SPATA31D1Q6ZQQ2 1576 aa18.42■□□□□ 0.54
SMIM12-206ENST00000521580 WAPLQ7Z5K2 1190 aa18.42■□□□□ 0.54
SMIM12-206ENST00000521580 CDK19Q9BWU1 502 aa18.42■□□□□ 0.54
SMIM12-206ENST00000521580 TERF2IPQ9NYB0 399 aa18.42■□□□□ 0.54
SMIM12-206ENST00000521580 ATAD2Q6PL18 1390 aa18.42■□□□□ 0.54
SMIM12-206ENST00000521580 A0A1W2PP64 1363 aa18.41■□□□□ 0.54
SMIM12-206ENST00000521580 GGNBP2Q9H3C7 697 aa18.4■□□□□ 0.54
SMIM12-206ENST00000521580 SLFN5Q08AF3 891 aa18.4■□□□□ 0.54
SMIM12-206ENST00000521580 NEUROD2Q15784 382 aa18.4■□□□□ 0.54
SMIM12-206ENST00000521580 NINLQ9Y2I6 1382 aa18.39■□□□□ 0.53
SMIM12-206ENST00000521580 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.39■□□□□ 0.53
SMIM12-206ENST00000521580 NSD2O96028 1365 aa18.38■□□□□ 0.53
SMIM12-206ENST00000521580 HDGFL2Q7Z4V5 671 aaPredicted RBP18.38■□□□□ 0.53
SMIM12-206ENST00000521580 CABP1Q9NZU7 370 aa18.38■□□□□ 0.53
SMIM12-206ENST00000521580 SPINK5Q9NQ38 1064 aaPredicted RBP18.37■□□□□ 0.53
SMIM12-206ENST00000521580 RRP7AQ9Y3A4 280 aaKnown RBP18.36■□□□□ 0.53
SMIM12-206ENST00000521580 TNRQ92752 1358 aa18.36■□□□□ 0.53
SMIM12-206ENST00000521580 HDGFP51858 240 aaKnown RBP18.36■□□□□ 0.53
SMIM12-206ENST00000521580 PLPPR3Q6T4P5 718 aa18.36■□□□□ 0.53
SMIM12-206ENST00000521580 CRBNQ96SW2 442 aa18.36■□□□□ 0.53
SMIM12-206ENST00000521580 ABCC11Q96J66 1382 aa18.35■□□□□ 0.53
SMIM12-206ENST00000521580 NGEFQ8N5V2 710 aa18.35■□□□□ 0.53
SMIM12-206ENST00000521580 RUNDC1Q96C34 613 aa18.35■□□□□ 0.53
SMIM12-206ENST00000521580 E9PSI1 815 aa18.35■□□□□ 0.53
SMIM12-206ENST00000521580 U2AF1L5P0DN76 240 aaPredicted RBP18.35■□□□□ 0.53
SMIM12-206ENST00000521580 U2AF1Q01081 240 aaKnown RBP eCLIP18.35■□□□□ 0.53
SMIM12-206ENST00000521580 USP32Q8NFA0 1604 aa18.34■□□□□ 0.53
SMIM12-206ENST00000521580 TXNDC2Q86VQ3 553 aa18.34■□□□□ 0.53
SMIM12-206ENST00000521580 DMRT2Q9Y5R5 561 aa18.34■□□□□ 0.53
SMIM12-206ENST00000521580 FYB1O15117 783 aa18.33■□□□□ 0.53
SMIM12-206ENST00000521580 C20orf194Q5TEA3 1177 aa18.33■□□□□ 0.52
SMIM12-206ENST00000521580 TCP11L2Q8N4U5 519 aa18.33■□□□□ 0.52
SMIM12-206ENST00000521580 WWC1Q8IX03 1113 aa18.33■□□□□ 0.52
SMIM12-206ENST00000521580 METP08581 1390 aa18.32■□□□□ 0.52
SMIM12-206ENST00000521580 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.31■□□□□ 0.52
SMIM12-206ENST00000521580 TRMT2AQ8IZ69 625 aaKnown RBP18.31■□□□□ 0.52
SMIM12-206ENST00000521580 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.31■□□□□ 0.52
SMIM12-206ENST00000521580 U2SURPO15042 1029 aaKnown RBP18.31■□□□□ 0.52
SMIM12-206ENST00000521580 CEBPAP49715 358 aaPredicted RBP18.31■□□□□ 0.52
SMIM12-206ENST00000521580 NKTRP30414 1462 aaKnown RBP18.28■□□□□ 0.52
SMIM12-206ENST00000521580 CD163L1Q9NR16 1453 aa18.28■□□□□ 0.52
SMIM12-206ENST00000521580 DLC1Q96QB1 1528 aa18.27■□□□□ 0.52
SMIM12-206ENST00000521580 WASLO00401 505 aaPredicted RBP18.27■□□□□ 0.52
SMIM12-206ENST00000521580 SHPRHQ149N8 1683 aa18.27■□□□□ 0.51
SMIM12-206ENST00000521580 TMEM2Q9UHN6 1383 aa18.27■□□□□ 0.51
SMIM12-206ENST00000521580 TRHP20396 242 aaPredicted RBP18.26■□□□□ 0.51
SMIM12-206ENST00000521580 BCAR3O75815 825 aa18.26■□□□□ 0.51
SMIM12-206ENST00000521580 PPM1GO15355 546 aaPredicted RBP18.25■□□□□ 0.51
SMIM12-206ENST00000521580 NUDT16Q96DE0 195 aaKnown RBP18.22■□□□□ 0.51
SMIM12-206ENST00000521580 FBLN1P23142 703 aa18.22■□□□□ 0.51
SMIM12-206ENST00000521580 NRXN3Q9Y4C0 1643 aa18.22■□□□□ 0.51
SMIM12-206ENST00000521580 NCKAP5LQ9HCH0 1330 aa18.22■□□□□ 0.51
SMIM12-206ENST00000521580 LTKP29376 864 aa18.22■□□□□ 0.51
SMIM12-206ENST00000521580 FANCIQ9NVI1 1328 aa18.21■□□□□ 0.51
SMIM12-206ENST00000521580 SETD1AO15047 1707 aaKnown RBP18.21■□□□□ 0.51
SMIM12-206ENST00000521580 DIAPH1O60610 1272 aaKnown RBP18.21■□□□□ 0.51
SMIM12-206ENST00000521580 CANXP27824 592 aaKnown RBP18.21■□□□□ 0.51
SMIM12-206ENST00000521580 NLRP1Q9C000 1473 aa18.21■□□□□ 0.51
SMIM12-206ENST00000521580 WDR63Q8IWG1 891 aa18.21■□□□□ 0.51
SMIM12-206ENST00000521580 MAPK8IP3Q9UPT6 1336 aa18.21■□□□□ 0.51
SMIM12-206ENST00000521580 PPIP5K1Q6PFW1 1433 aa18.21■□□□□ 0.51
SMIM12-206ENST00000521580 SLC26A8Q96RN1 970 aa18.2■□□□□ 0.5
SMIM12-206ENST00000521580 EID1Q9Y6B2 187 aa18.2■□□□□ 0.5
SMIM12-206ENST00000521580 MED14O60244 1454 aa18.2■□□□□ 0.5
SMIM12-206ENST00000521580 IQSEC2Q5JU85 1478 aa18.2■□□□□ 0.5
SMIM12-206ENST00000521580 CCDC61Q9Y6R9 512 aa18.19■□□□□ 0.5
SMIM12-206ENST00000521580 PHF23Q9BUL5 403 aaPredicted RBP18.19■□□□□ 0.5
SMIM12-206ENST00000521580 ATP7BP35670 1465 aa18.19■□□□□ 0.5
SMIM12-206ENST00000521580 CCDC27Q2M243 656 aa18.18■□□□□ 0.5
SMIM12-206ENST00000521580 SIRT1Q96EB6 747 aa18.18■□□□□ 0.5
SMIM12-206ENST00000521580 NME9Q86XW9 330 aa18.18■□□□□ 0.5
SMIM12-206ENST00000521580 FAM135BQ49AJ0 1406 aa18.18■□□□□ 0.5
SMIM12-206ENST00000521580 NUTM2FA1L443 756 aa18.18■□□□□ 0.5
SMIM12-206ENST00000521580 FRAT1Q92837 279 aaPredicted RBP18.17■□□□□ 0.5
SMIM12-206ENST00000521580 ROBO2Q9HCK4 1378 aa18.17■□□□□ 0.5
SMIM12-206ENST00000521580 MYH16Q9H6N6 1097 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms