RNA–Protein interactions for RNA: ENST00000521578.5

PTP4A3-204, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTP4A3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-204ENST00000521578 SCAF1Q9H7N4 1312 aaKnown RBP30.78■■■□□ 2.52
PTP4A3-204ENST00000521578 XIRP1Q702N8 1843 aaKnown RBP30.78■■■□□ 2.52
PTP4A3-204ENST00000521578 ST20-MTHFSA0A0A6YYL1 179 aa30.76■■■□□ 2.51
PTP4A3-204ENST00000521578 MINK1Q8N4C8 1332 aaPredicted RBP30.75■■■□□ 2.51
PTP4A3-204ENST00000521578 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.75■■■□□ 2.51
PTP4A3-204ENST00000521578 EIF4G2P78344 907 aaKnown RBP eCLIP30.74■■■□□ 2.516e-7■■■■■ 31.9
PTP4A3-204ENST00000521578 HIRIP3Q9BW71 556 aaPredicted RBP30.73■■■□□ 2.51
PTP4A3-204ENST00000521578 QRICH2Q9H0J4 1663 aa30.72■■■□□ 2.51
PTP4A3-204ENST00000521578 NALCNQ8IZF0 1738 aa30.72■■■□□ 2.51
PTP4A3-204ENST00000521578 YTHDC1Q96MU7 727 aaKnown RBP30.72■■■□□ 2.51
PTP4A3-204ENST00000521578 NCOA3Q9Y6Q9 1424 aa30.71■■■□□ 2.51
PTP4A3-204ENST00000521578 HSPA5P11021 654 aaKnown RBP30.71■■■□□ 2.51
PTP4A3-204ENST00000521578 ADGRL3Q9HAR2 1447 aa30.71■■■□□ 2.51
PTP4A3-204ENST00000521578 DDX10Q13206 875 aaKnown RBP30.7■■■□□ 2.51
PTP4A3-204ENST00000521578 C19orf44Q9H6X5 657 aa30.69■■■□□ 2.5
PTP4A3-204ENST00000521578 CERKQ8TCT0 537 aa30.68■■■□□ 2.5
PTP4A3-204ENST00000521578 MSH6P52701 1360 aa30.68■■■□□ 2.5
PTP4A3-204ENST00000521578 TESK2Q96S53 571 aa30.64■■■□□ 2.5
PTP4A3-204ENST00000521578 ATF3P18847 181 aa30.61■■■□□ 2.49
PTP4A3-204ENST00000521578 ADGRB2O60241 1585 aa30.61■■■□□ 2.49
PTP4A3-204ENST00000521578 SBNO2Q9Y2G9 1366 aa30.6■■■□□ 2.49
PTP4A3-204ENST00000521578 WASLO00401 505 aaPredicted RBP30.59■■■□□ 2.49
PTP4A3-204ENST00000521578 CDC42BPGQ6DT37 1551 aa30.59■■■□□ 2.49
PTP4A3-204ENST00000521578 NUTM2FA1L443 756 aa30.59■■■□□ 2.49
PTP4A3-204ENST00000521578 CADPS2Q86UW7 1296 aa30.57■■■□□ 2.48
PTP4A3-204ENST00000521578 CDK19Q9BWU1 502 aa30.57■■■□□ 2.48
PTP4A3-204ENST00000521578 DCCP43146 1447 aa30.57■■■□□ 2.48
PTP4A3-204ENST00000521578 IQSEC2Q5JU85 1478 aa30.57■■■□□ 2.48
PTP4A3-204ENST00000521578 TULP4Q9NRJ4 1543 aa30.56■■■□□ 2.48
PTP4A3-204ENST00000521578 EVC2Q86UK5 1308 aa30.56■■■□□ 2.48
PTP4A3-204ENST00000521578 SRPK2P78362 688 aaKnown RBP30.53■■■□□ 2.48
PTP4A3-204ENST00000521578 CABP2Q9NPB3 220 aa30.53■■■□□ 2.48
PTP4A3-204ENST00000521578 FMN2Q9NZ56 1722 aa30.52■■■□□ 2.48
PTP4A3-204ENST00000521578 DISP3Q9P2K9 1392 aa30.52■■■□□ 2.48
PTP4A3-204ENST00000521578 TMF1P82094 1093 aa30.52■■■□□ 2.48
PTP4A3-204ENST00000521578 SLC24A1O60721 1099 aa30.5■■■□□ 2.47
PTP4A3-204ENST00000521578 UBAP1LF5GYI3 381 aa30.5■■■□□ 2.47
PTP4A3-204ENST00000521578 SLAIN2Q9P270 581 aa30.49■■■□□ 2.47
PTP4A3-204ENST00000521578 MST1RQ04912 1400 aa30.49■■■□□ 2.47
PTP4A3-204ENST00000521578 TOM1O60784 492 aa30.47■■■□□ 2.47
PTP4A3-204ENST00000521578 PRR36Q9H6K5 1346 aa30.47■■■□□ 2.47
PTP4A3-204ENST00000521578 NUDT16Q96DE0 195 aaKnown RBP30.46■■■□□ 2.47
PTP4A3-204ENST00000521578 RGPD8O14715 1765 aaPredicted RBP30.45■■■□□ 2.47
PTP4A3-204ENST00000521578 USP32Q8NFA0 1604 aa30.45■■■□□ 2.46
PTP4A3-204ENST00000521578 GTF3C3Q9Y5Q9 886 aa30.44■■■□□ 2.46
PTP4A3-204ENST00000521578 C1orf167Q5SNV9 1468 aa30.44■■■□□ 2.46
PTP4A3-204ENST00000521578 C11orf95C9JLR9 678 aaPredicted RBP30.44■■■□□ 2.46
PTP4A3-204ENST00000521578 WASHC2AQ641Q2 1341 aa30.43■■■□□ 2.46
PTP4A3-204ENST00000521578 ATP7BP35670 1465 aa30.42■■■□□ 2.46
PTP4A3-204ENST00000521578 CCER2I3L3R5 266 aa30.42■■■□□ 2.46
PTP4A3-204ENST00000521578 ANP32CO43423 234 aa30.42■■■□□ 2.46
PTP4A3-204ENST00000521578 POLR3GLQ9BT43 218 aa30.42■■■□□ 2.46
PTP4A3-204ENST00000521578 ANKARQ7Z5J8 1434 aa30.42■■■□□ 2.46
PTP4A3-204ENST00000521578 ESCO1Q5FWF5 840 aa30.42■■■□□ 2.46
PTP4A3-204ENST00000521578 ORAI2Q96SN7 254 aa30.42■■■□□ 2.46
PTP4A3-204ENST00000521578 PIP4K2BP78356 416 aa30.41■■■□□ 2.46
PTP4A3-204ENST00000521578 CDCA8Q53HL2 280 aa30.39■■■□□ 2.46
PTP4A3-204ENST00000521578 CCDC61Q9Y6R9 512 aa30.39■■■□□ 2.45
PTP4A3-204ENST00000521578 ATAD2Q6PL18 1390 aa30.37■■■□□ 2.45
PTP4A3-204ENST00000521578 BRINP3Q76B58 766 aa30.36■■■□□ 2.45
PTP4A3-204ENST00000521578 PMFBP1Q8TBY8 1022 aa30.36■■■□□ 2.45
PTP4A3-204ENST00000521578 PUS7Q96PZ0 661 aaKnown RBP30.36■■■□□ 2.45
PTP4A3-204ENST00000521578 PPIP5K1Q6PFW1 1433 aa30.34■■■□□ 2.45
PTP4A3-204ENST00000521578 TMC1Q8TDI8 760 aa30.34■■■□□ 2.45
PTP4A3-204ENST00000521578 CABP1Q9NZU7 370 aa30.34■■■□□ 2.45
PTP4A3-204ENST00000521578 ITSN1Q15811 1721 aa30.34■■■□□ 2.45
PTP4A3-204ENST00000521578 KIF7Q2M1P5 1343 aa30.33■■■□□ 2.45
PTP4A3-204ENST00000521578 PHF8Q9UPP1 1060 aa30.33■■■□□ 2.45
PTP4A3-204ENST00000521578 TOPAZ1Q8N9V7 1692 aa30.33■■■□□ 2.45
PTP4A3-204ENST00000521578 CCDC7Q96M83 1385 aa30.32■■■□□ 2.44
PTP4A3-204ENST00000521578 ROBO1Q9Y6N7 1651 aa30.32■■■□□ 2.44
PTP4A3-204ENST00000521578 SLC12A5Q9H2X9 1139 aa30.3■■■□□ 2.44
PTP4A3-204ENST00000521578 PLEKHG3A1L390 1219 aa30.27■■■□□ 2.44
PTP4A3-204ENST00000521578 FOXO3O43524 673 aa30.27■■■□□ 2.44
PTP4A3-204ENST00000521578 NGDNQ8NEJ9 315 aaKnown RBP30.27■■■□□ 2.44
PTP4A3-204ENST00000521578 DDX17Q92841 729 aaKnown RBP30.27■■■□□ 2.44
PTP4A3-204ENST00000521578 ACEP12821 1306 aa30.26■■■□□ 2.43
PTP4A3-204ENST00000521578 KIF1AQ12756 1690 aa30.25■■■□□ 2.43
PTP4A3-204ENST00000521578 MYOM1P52179 1685 aa30.24■■■□□ 2.43
PTP4A3-204ENST00000521578 XPCQ01831 940 aaPredicted RBP30.22■■■□□ 2.43
PTP4A3-204ENST00000521578 NINLQ9Y2I6 1382 aa30.21■■■□□ 2.43
PTP4A3-204ENST00000521578 POLR3AO14802 1390 aaPredicted RBP30.2■■■□□ 2.43
PTP4A3-204ENST00000521578 PSME1Q06323 249 aa30.19■■■□□ 2.42
PTP4A3-204ENST00000521578 NPHP3Q7Z494 1330 aa30.19■■■□□ 2.42
PTP4A3-204ENST00000521578 CD163L1Q9NR16 1453 aa30.18■■■□□ 2.42
PTP4A3-204ENST00000521578 TERF2IPQ9NYB0 399 aa30.17■■■□□ 2.42
PTP4A3-204ENST00000521578 NHSL1Q5SYE7 1610 aa30.17■■■□□ 2.42
PTP4A3-204ENST00000521578 HDGFL2Q7Z4V5 671 aaPredicted RBP30.16■■■□□ 2.42
PTP4A3-204ENST00000521578 FBXO41Q8TF61 875 aa30.16■■■□□ 2.42
PTP4A3-204ENST00000521578 A0A1W2PP64 1363 aa30.16■■■□□ 2.42
PTP4A3-204ENST00000521578 CPSF1Q10570 1443 aaKnown RBP30.16■■■□□ 2.42
PTP4A3-204ENST00000521578 KRT28Q7Z3Y7 464 aa30.16■■■□□ 2.42
PTP4A3-204ENST00000521578 KTN1Q86UP2 1357 aaKnown RBP30.14■■■□□ 2.41
PTP4A3-204ENST00000521578 ANKRD36BQ8N2N9 1353 aa30.14■■■□□ 2.41
PTP4A3-204ENST00000521578 AKAP12Q02952 1782 aa30.14■■■□□ 2.41
PTP4A3-204ENST00000521578 ZNF692Q9BU19 519 aaPredicted RBP30.13■■■□□ 2.41
PTP4A3-204ENST00000521578 AHDC1Q5TGY3 1603 aaPredicted RBP30.13■■■□□ 2.41
PTP4A3-204ENST00000521578 PANK3Q9H999 370 aa30.12■■■□□ 2.41
PTP4A3-204ENST00000521578 PHLPP1O60346 1717 aa30.11■■■□□ 2.41
PTP4A3-204ENST00000521578 PXDNQ92626 1479 aa30.11■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms