RNA–Protein interactions for RNA: ENST00000521516.5

HMBOX1-208, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 2,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-208ENST00000521516 ORAI2Q96SN7 254 aa12.26□□□□□ -0.45
HMBOX1-208ENST00000521516 DCAF8L1A6NGE4 600 aa12.26□□□□□ -0.45
HMBOX1-208ENST00000521516 NINLQ9Y2I6 1382 aa12.25□□□□□ -0.45
HMBOX1-208ENST00000521516 NRXN3Q9Y4C0 1643 aa12.25□□□□□ -0.45
HMBOX1-208ENST00000521516 CEP350Q5VT06 3117 aa12.24□□□□□ -0.45
HMBOX1-208ENST00000521516 VPS72Q15906 364 aa12.24□□□□□ -0.45
HMBOX1-208ENST00000521516 RGPD1P0DJD0 1748 aa12.24□□□□□ -0.45
HMBOX1-208ENST00000521516 PXDNQ92626 1479 aa12.23□□□□□ -0.45
HMBOX1-208ENST00000521516 PTPN23Q9H3S7 1636 aa12.22□□□□□ -0.45
HMBOX1-208ENST00000521516 ABCC5O15440 1437 aa12.22□□□□□ -0.45
HMBOX1-208ENST00000521516 METP08581 1390 aa12.22□□□□□ -0.45
HMBOX1-208ENST00000521516 CROCC2H7BZ55 1655 aa12.22□□□□□ -0.45
HMBOX1-208ENST00000521516 NPHP3Q7Z494 1330 aa12.2□□□□□ -0.46
HMBOX1-208ENST00000521516 CHGAP10645 457 aaKnown RBP12.19□□□□□ -0.46
HMBOX1-208ENST00000521516 TNS1Q9HBL0 1735 aaKnown RBP12.19□□□□□ -0.46
HMBOX1-208ENST00000521516 EZH2Q15910 746 aaKnown RBP12.19□□□□□ -0.46
HMBOX1-208ENST00000521516 CAMKK2Q96RR4 588 aa12.19□□□□□ -0.46
HMBOX1-208ENST00000521516 ADGRL2O95490 1459 aa12.19□□□□□ -0.46
HMBOX1-208ENST00000521516 CAMTA1Q9Y6Y1 1673 aa12.18□□□□□ -0.46
HMBOX1-208ENST00000521516 USP32Q8NFA0 1604 aa12.18□□□□□ -0.46
HMBOX1-208ENST00000521516 PARD3Q8TEW0 1356 aa12.17□□□□□ -0.46
HMBOX1-208ENST00000521516 SPON1Q9HCB6 807 aa12.17□□□□□ -0.46
HMBOX1-208ENST00000521516 PPP1R1BQ9UD71 204 aaPredicted RBP12.17□□□□□ -0.46
HMBOX1-208ENST00000521516 NWD2Q9ULI1 1742 aa12.16□□□□□ -0.46
HMBOX1-208ENST00000521516 UTRNP46939 3433 aa12.16□□□□□ -0.46
HMBOX1-208ENST00000521516 ANKRD30AQ9BXX3 1397 aa12.15□□□□□ -0.46
HMBOX1-208ENST00000521516 DAPK1P53355 1430 aa12.15□□□□□ -0.47
HMBOX1-208ENST00000521516 KCNQ2O43526 872 aa12.14□□□□□ -0.47
HMBOX1-208ENST00000521516 ADGRB2O60241 1585 aa12.14□□□□□ -0.47
HMBOX1-208ENST00000521516 PRAG1Q86YV5 1406 aa12.14□□□□□ -0.47
HMBOX1-208ENST00000521516 IQGAP3Q86VI3 1631 aa12.14□□□□□ -0.47
HMBOX1-208ENST00000521516 PLCH1Q4KWH8 1693 aa12.13□□□□□ -0.47
HMBOX1-208ENST00000521516 RREB1Q92766 1687 aa12.13□□□□□ -0.47
HMBOX1-208ENST00000521516 CCDC9Q9Y3X0 531 aaKnown RBP12.13□□□□□ -0.47
HMBOX1-208ENST00000521516 LRPPRCP42704 1394 aaKnown RBP12.12□□□□□ -0.47
HMBOX1-208ENST00000521516 SPATA31A3Q5VYP0 1347 aa12.12□□□□□ -0.47
HMBOX1-208ENST00000521516 XPCQ01831 940 aaPredicted RBP12.12□□□□□ -0.47
HMBOX1-208ENST00000521516 ROBO2Q9HCK4 1378 aa12.12□□□□□ -0.47
HMBOX1-208ENST00000521516 FOXO3O43524 673 aa12.11□□□□□ -0.47
HMBOX1-208ENST00000521516 FAM98CQ17RN3 349 aaKnown RBP12.11□□□□□ -0.47
HMBOX1-208ENST00000521516 ESCO1Q5FWF5 840 aa12.11□□□□□ -0.47
HMBOX1-208ENST00000521516 NUP188Q5SRE5 1749 aa12.11□□□□□ -0.47
HMBOX1-208ENST00000521516 FAM182BQ5T319 152 aa12.1□□□□□ -0.47
HMBOX1-208ENST00000521516 A0A0G2JS52 829 aa12.1□□□□□ -0.47
HMBOX1-208ENST00000521516 MYT1Q01538 1121 aa12.1□□□□□ -0.47
HMBOX1-208ENST00000521516 NBPF8Q3BBV2 869 aa12.09□□□□□ -0.47
HMBOX1-208ENST00000521516 NBPF14Q5TI25 921 aa12.09□□□□□ -0.47
HMBOX1-208ENST00000521516 CDC42BPGQ6DT37 1551 aa12.09□□□□□ -0.47
HMBOX1-208ENST00000521516 CHD4Q14839 1912 aa12.08□□□□□ -0.47
HMBOX1-208ENST00000521516 E9PCH4 1651 aa12.08□□□□□ -0.48
HMBOX1-208ENST00000521516 NRAPQ86VF7 1730 aa12.08□□□□□ -0.48
HMBOX1-208ENST00000521516 HFM1A2PYH4 1435 aa12.07□□□□□ -0.48
HMBOX1-208ENST00000521516 THSD7AQ9UPZ6 1657 aa12.07□□□□□ -0.48
HMBOX1-208ENST00000521516 GIGYF1O75420 1035 aaPredicted RBP12.07□□□□□ -0.48
HMBOX1-208ENST00000521516 TRIM37O94972 964 aa12.06□□□□□ -0.48
HMBOX1-208ENST00000521516 APBA3O96018 575 aa12.06□□□□□ -0.48
HMBOX1-208ENST00000521516 CHIC2Q9UKJ5 165 aa12.06□□□□□ -0.48
HMBOX1-208ENST00000521516 ANKRD50Q9ULJ7 1429 aa12.05□□□□□ -0.48
HMBOX1-208ENST00000521516 FAM83GA6ND36 823 aa12.05□□□□□ -0.48
HMBOX1-208ENST00000521516 FAM196AQ6ZSG2 479 aa12.05□□□□□ -0.48
HMBOX1-208ENST00000521516 CCDC144AA2RUR9 1427 aa12.05□□□□□ -0.48
HMBOX1-208ENST00000521516 NRKQ7Z2Y5 1582 aa12.05□□□□□ -0.48
HMBOX1-208ENST00000521516 NEXMIFQ5QGS0 1516 aa12.04□□□□□ -0.48
HMBOX1-208ENST00000521516 KANK4Q5T7N3 995 aaPredicted RBP12.03□□□□□ -0.48
HMBOX1-208ENST00000521516 ABCA3Q99758 1704 aa12.03□□□□□ -0.48
HMBOX1-208ENST00000521516 SPATA31A5Q5VU36 1347 aa12.03□□□□□ -0.48
HMBOX1-208ENST00000521516 SPATA31A7Q8IWB4 1347 aa12.03□□□□□ -0.48
HMBOX1-208ENST00000521516 TNS3Q68CZ2 1445 aa12.03□□□□□ -0.48
HMBOX1-208ENST00000521516 HAP1P54257 671 aaPredicted RBP12.03□□□□□ -0.48
HMBOX1-208ENST00000521516 CABLES1Q8TDN4 633 aa12.03□□□□□ -0.48
HMBOX1-208ENST00000521516 CASZ1Q86V15 1759 aa12.02□□□□□ -0.49
HMBOX1-208ENST00000521516 KRT28Q7Z3Y7 464 aa12.01□□□□□ -0.49
HMBOX1-208ENST00000521516 MYOM1P52179 1685 aa12□□□□□ -0.49
HMBOX1-208ENST00000521516 KIF1AQ12756 1690 aa12□□□□□ -0.49
HMBOX1-208ENST00000521516 PTGER2P43116 358 aa12□□□□□ -0.49
HMBOX1-208ENST00000521516 ZNF326Q5BKZ1 582 aaKnown RBP11.99□□□□□ -0.49
HMBOX1-208ENST00000521516 SYT17Q9BSW7 474 aa11.99□□□□□ -0.49
HMBOX1-208ENST00000521516 BTG4Q9NY30 223 aa11.99□□□□□ -0.49
HMBOX1-208ENST00000521516 NAIPQ13075 1403 aa11.99□□□□□ -0.49
HMBOX1-208ENST00000521516 RRBP1Q9P2E9 1410 aaKnown RBP11.99□□□□□ -0.49
HMBOX1-208ENST00000521516 SBNO1A3KN83 1393 aa11.98□□□□□ -0.49
HMBOX1-208ENST00000521516 ARHGEF10O15013 1369 aa11.97□□□□□ -0.49
HMBOX1-208ENST00000521516 FHDC1Q9C0D6 1143 aaPredicted RBP11.97□□□□□ -0.49
HMBOX1-208ENST00000521516 COL14A1Q05707 1796 aaKnown RBP11.97□□□□□ -0.49
HMBOX1-208ENST00000521516 PSME1Q06323 249 aa11.96□□□□□ -0.49
HMBOX1-208ENST00000521516 DLC1Q96QB1 1528 aa11.95□□□□□ -0.5
HMBOX1-208ENST00000521516 SHANK3Q9BYB0 1731 aa11.95□□□□□ -0.5
HMBOX1-208ENST00000521516 SPATA31A1Q5TZJ5 1347 aa11.94□□□□□ -0.5
HMBOX1-208ENST00000521516 NUTM2FA1L443 756 aa11.94□□□□□ -0.5
HMBOX1-208ENST00000521516 PDGFDQ9GZP0 370 aaPredicted RBP11.94□□□□□ -0.5
HMBOX1-208ENST00000521516 ANO8Q9HCE9 1232 aaPredicted RBP11.94□□□□□ -0.5
HMBOX1-208ENST00000521516 FMN2Q9NZ56 1722 aa11.94□□□□□ -0.5
HMBOX1-208ENST00000521516 MAP3K5Q99683 1374 aa11.93□□□□□ -0.5
HMBOX1-208ENST00000521516 ZBTB7AO95365 584 aa11.93□□□□□ -0.5
HMBOX1-208ENST00000521516 RGPD3A6NKT7 1758 aaPredicted RBP11.93□□□□□ -0.5
HMBOX1-208ENST00000521516 RGPD4Q7Z3J3 1758 aa11.93□□□□□ -0.5
HMBOX1-208ENST00000521516 VPS8Q8N3P4 1428 aa11.93□□□□□ -0.5
HMBOX1-208ENST00000521516 SLC34A2O95436 690 aa11.92□□□□□ -0.5
HMBOX1-208ENST00000521516 HSPA6P17066 643 aa11.92□□□□□ -0.5
HMBOX1-208ENST00000521516 PLEKHG5O94827 1062 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms