RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 RSBN1LQ6PCB5 846 aaPredicted RBP13.25□□□□□ -0.29
NUDCD1-204ENST00000521439 HOXA2O43364 376 aa13.24□□□□□ -0.29
NUDCD1-204ENST00000521439 TLL1O43897 1013 aa13.24□□□□□ -0.29
NUDCD1-204ENST00000521439 GJA5P36382 358 aa13.24□□□□□ -0.29
NUDCD1-204ENST00000521439 SLC27A5Q9Y2P5 690 aa13.24□□□□□ -0.29
NUDCD1-204ENST00000521439 ADH1BP00325 375 aa13.23□□□□□ -0.29
NUDCD1-204ENST00000521439 NDUFV2P19404 249 aa13.22□□□□□ -0.29
NUDCD1-204ENST00000521439 GGCXP38435 758 aa13.22□□□□□ -0.29
NUDCD1-204ENST00000521439 SALL2Q9Y467 1007 aaPredicted RBP13.22□□□□□ -0.29
NUDCD1-204ENST00000521439 FMNL1O95466 1100 aaPredicted RBP13.2□□□□□ -0.3
NUDCD1-204ENST00000521439 Q3C1V9 767 aa13.2□□□□□ -0.3
NUDCD1-204ENST00000521439 PPP1R18Q6NYC8 613 aa13.2□□□□□ -0.3
NUDCD1-204ENST00000521439 SPSB2Q99619 263 aa13.2□□□□□ -0.3
NUDCD1-204ENST00000521439 RGS20O76081 388 aa13.19□□□□□ -0.3
NUDCD1-204ENST00000521439 PPP2R2DQ66LE6 453 aa13.19□□□□□ -0.3
NUDCD1-204ENST00000521439 THAP11Q96EK4 314 aa13.19□□□□□ -0.3
NUDCD1-204ENST00000521439 ZMYND15Q9H091 742 aa13.19□□□□□ -0.3
NUDCD1-204ENST00000521439 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.19□□□□□ -0.3
NUDCD1-204ENST00000521439 RFC5P40937 340 aa13.18□□□□□ -0.3
NUDCD1-204ENST00000521439 CSPP1Q1MSJ5 1256 aa13.17□□□□□ -0.3
NUDCD1-204ENST00000521439 FBXO31Q5XUX0 539 aaPredicted RBP13.17□□□□□ -0.3
NUDCD1-204ENST00000521439 PCDHB15Q9Y5E8 787 aa13.17□□□□□ -0.3
NUDCD1-204ENST00000521439 BRICD5Q6PL45 260 aa13.16□□□□□ -0.3
NUDCD1-204ENST00000521439 HLA-CQ95604 372 aa13.16□□□□□ -0.3
NUDCD1-204ENST00000521439 FDX1P10109 184 aa13.15□□□□□ -0.3
NUDCD1-204ENST00000521439 SLC6A16Q9GZN6 736 aa13.15□□□□□ -0.3
NUDCD1-204ENST00000521439 LILRB3O75022 631 aa13.14□□□□□ -0.31
NUDCD1-204ENST00000521439 S1PR4O95977 384 aa13.14□□□□□ -0.31
NUDCD1-204ENST00000521439 QPCTQ16769 361 aa13.14□□□□□ -0.31
NUDCD1-204ENST00000521439 RNF19BQ6ZMZ0 732 aa13.14□□□□□ -0.31
NUDCD1-204ENST00000521439 GUCA2AQ02747 115 aa13.13□□□□□ -0.31
NUDCD1-204ENST00000521439 MCM6Q14566 821 aa13.13□□□□□ -0.31
NUDCD1-204ENST00000521439 TMEM259Q4ZIN3 620 aa13.13□□□□□ -0.31
NUDCD1-204ENST00000521439 PRPF38BQ5VTL8 546 aaKnown RBP13.13□□□□□ -0.31
NUDCD1-204ENST00000521439 BANK1Q8NDB2 785 aa13.12□□□□□ -0.31
NUDCD1-204ENST00000521439 NUTM2BA6NNL0 878 aaPredicted RBP13.11□□□□□ -0.31
NUDCD1-204ENST00000521439 NUTM2EB1AL46 878 aaPredicted RBP13.11□□□□□ -0.31
NUDCD1-204ENST00000521439 MSS51Q4VC12 460 aa13.11□□□□□ -0.31
NUDCD1-204ENST00000521439 NUTM2DQ5VT03 806 aaPredicted RBP13.11□□□□□ -0.31
NUDCD1-204ENST00000521439 NUTM2AQ8IVF1 878 aaPredicted RBP13.11□□□□□ -0.31
NUDCD1-204ENST00000521439 PCDHGC3Q9UN70 934 aa13.11□□□□□ -0.31
NUDCD1-204ENST00000521439 RNF223E7ERA6 249 aa13.1□□□□□ -0.31
NUDCD1-204ENST00000521439 ZBTB3Q9H5J0 574 aa13.1□□□□□ -0.31
NUDCD1-204ENST00000521439 HRCP23327 699 aa13.09□□□□□ -0.31
NUDCD1-204ENST00000521439 RTL5Q5HYW3 569 aaPredicted RBP13.09□□□□□ -0.31
NUDCD1-204ENST00000521439 FAM160A2Q8N612 972 aaPredicted RBP13.09□□□□□ -0.31
NUDCD1-204ENST00000521439 CABLES1Q8TDN4 633 aa13.09□□□□□ -0.31
NUDCD1-204ENST00000521439 USB1Q9BQ65 265 aaKnown RBP13.09□□□□□ -0.31
NUDCD1-204ENST00000521439 SPDYE5A6NIY4 337 aa13.08□□□□□ -0.32
NUDCD1-204ENST00000521439 ANKLE1Q8NAG6 615 aa13.08□□□□□ -0.32
NUDCD1-204ENST00000521439 UBTFP17480 764 aaKnown RBP13.07□□□□□ -0.32
NUDCD1-204ENST00000521439 SUPT5HO00267 1087 aaKnown RBP13.06□□□□□ -0.32
NUDCD1-204ENST00000521439 MTMR2Q13614 643 aa13.05□□□□□ -0.32
NUDCD1-204ENST00000521439 RETREG3Q86VR2 466 aa13.05□□□□□ -0.32
NUDCD1-204ENST00000521439 C6orf229H3BNL8 230 aa13.04□□□□□ -0.32
NUDCD1-204ENST00000521439 PPEF1O14829 653 aaPredicted RBP13.04□□□□□ -0.32
NUDCD1-204ENST00000521439 PRDM9Q9NQV7 894 aa13.04□□□□□ -0.32
NUDCD1-204ENST00000521439 SNRKQ9NRH2 765 aa13.04□□□□□ -0.32
NUDCD1-204ENST00000521439 AP1G2O75843 785 aa13.03□□□□□ -0.32
NUDCD1-204ENST00000521439 SYMPKQ92797 1274 aaKnown RBP13.03□□□□□ -0.32
NUDCD1-204ENST00000521439 A6NJR5 290 aa13.02□□□□□ -0.33
NUDCD1-204ENST00000521439 CLUAP1Q96AJ1 413 aa13.02□□□□□ -0.33
NUDCD1-204ENST00000521439 V9GY48 417 aaPredicted RBP13.02□□□□□ -0.33
NUDCD1-204ENST00000521439 MMP16P51512 607 aa13.01□□□□□ -0.33
NUDCD1-204ENST00000521439 PRKD2Q9BZL6 878 aa13.01□□□□□ -0.33
NUDCD1-204ENST00000521439 FCF1Q9Y324 198 aaKnown RBP12.99□□□□□ -0.33
NUDCD1-204ENST00000521439 DXOO77932 396 aaKnown RBP12.98□□□□□ -0.33
NUDCD1-204ENST00000521439 SOCS7O14512 581 aa12.97□□□□□ -0.33
NUDCD1-204ENST00000521439 RAD21O60216 631 aa12.97□□□□□ -0.33
NUDCD1-204ENST00000521439 USP17L8P0C7I0 530 aa12.97□□□□□ -0.33
NUDCD1-204ENST00000521439 JUNDP17535 347 aa12.97□□□□□ -0.33
NUDCD1-204ENST00000521439 MTMR14Q8NCE2 650 aa12.97□□□□□ -0.33
NUDCD1-204ENST00000521439 POM121Q96HA1 1249 aa12.96□□□□□ -0.33
NUDCD1-204ENST00000521439 CFAP99D6REC4 459 aa12.95□□□□□ -0.34
NUDCD1-204ENST00000521439 SLC19A1P41440 591 aa12.95□□□□□ -0.34
NUDCD1-204ENST00000521439 HELBQ8NG08 1087 aaPredicted RBP12.95□□□□□ -0.34
NUDCD1-204ENST00000521439 APBB1O00213 710 aa12.94□□□□□ -0.34
NUDCD1-204ENST00000521439 CTDSPL2Q05D32 466 aa12.94□□□□□ -0.34
NUDCD1-204ENST00000521439 PLA2G2CQ5R387 149 aa12.94□□□□□ -0.34
NUDCD1-204ENST00000521439 PRR7Q8TB68 274 aa12.94□□□□□ -0.34
NUDCD1-204ENST00000521439 COG6Q9Y2V7 657 aa12.94□□□□□ -0.34
NUDCD1-204ENST00000521439 TSC1Q92574 1164 aa12.93□□□□□ -0.34
NUDCD1-204ENST00000521439 TRAK2O60296 914 aa12.92□□□□□ -0.34
NUDCD1-204ENST00000521439 DESI1Q6ICB0 168 aa12.92□□□□□ -0.34
NUDCD1-204ENST00000521439 EMID1Q96A84 441 aaPredicted RBP12.92□□□□□ -0.34
NUDCD1-204ENST00000521439 LIAT1Q6ZQX7 453 aa12.91□□□□□ -0.34
NUDCD1-204ENST00000521439 PROSER2Q86WR7 435 aaPredicted RBP12.91□□□□□ -0.34
NUDCD1-204ENST00000521439 PRM3Q9NNZ6 103 aa12.91□□□□□ -0.34
NUDCD1-204ENST00000521439 RPIAP49247 311 aa12.89□□□□□ -0.35
NUDCD1-204ENST00000521439 SPRYD7Q5W111 196 aa12.89□□□□□ -0.35
NUDCD1-204ENST00000521439 FNBP4Q8N3X1 1017 aaPredicted RBP12.89□□□□□ -0.35
NUDCD1-204ENST00000521439 ZBTB24O43167 697 aaPredicted RBP12.88□□□□□ -0.35
NUDCD1-204ENST00000521439 NUDT12Q9BQG2 462 aa12.88□□□□□ -0.35
NUDCD1-204ENST00000521439 PTPRNQ16849 979 aa12.87□□□□□ -0.35
NUDCD1-204ENST00000521439 CCDC24Q8N4L8 307 aa12.87□□□□□ -0.35
NUDCD1-204ENST00000521439 GJD4Q96KN9 370 aaPredicted RBP12.87□□□□□ -0.35
NUDCD1-204ENST00000521439 GDPD2Q9HCC8 539 aa12.87□□□□□ -0.35
NUDCD1-204ENST00000521439 ZNF598Q86UK7 904 aaKnown RBP12.86□□□□□ -0.35
NUDCD1-204ENST00000521439 LRRN4Q8WUT4 740 aa12.86□□□□□ -0.35
NUDCD1-204ENST00000521439 HMX1Q9NP08 348 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms