RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 LAMC1P11047 1609 aa30.23■■■□□ 2.43
PABPC1-217ENST00000521067 ADAMTS2O95450 1211 aa30.23■■■□□ 2.43
PABPC1-217ENST00000521067 LRPPRCP42704 1394 aaKnown RBP30.21■■■□□ 2.43
PABPC1-217ENST00000521067 ESCO1Q5FWF5 840 aa30.21■■■□□ 2.43
PABPC1-217ENST00000521067 QTRT2Q9H974 415 aaKnown RBP30.21■■■□□ 2.43
PABPC1-217ENST00000521067 TECPR2O15040 1411 aa30.2■■■□□ 2.42
PABPC1-217ENST00000521067 PLEKHH1Q9ULM0 1364 aa30.19■■■□□ 2.42
PABPC1-217ENST00000521067 ABCC11Q96J66 1382 aa30.18■■■□□ 2.42
PABPC1-217ENST00000521067 NUTM2FA1L443 756 aa30.18■■■□□ 2.42
PABPC1-217ENST00000521067 NGLY1Q96IV0 654 aa30.18■■■□□ 2.42
PABPC1-217ENST00000521067 PIK3C2GO75747 1445 aa30.17■■■□□ 2.42
PABPC1-217ENST00000521067 CDK12Q9NYV4 1490 aaPredicted RBP30.15■■■□□ 2.42
PABPC1-217ENST00000521067 FOXO3O43524 673 aa30.15■■■□□ 2.42
PABPC1-217ENST00000521067 CDC42BPGQ6DT37 1551 aa30.15■■■□□ 2.42
PABPC1-217ENST00000521067 IFT172Q9UG01 1749 aa30.14■■■□□ 2.42
PABPC1-217ENST00000521067 RBM6P78332 1123 aaKnown RBP30.14■■■□□ 2.42
PABPC1-217ENST00000521067 XPCQ01831 940 aaPredicted RBP30.14■■■□□ 2.42
PABPC1-217ENST00000521067 C14orf93Q9H972 538 aaKnown RBP30.12■■■□□ 2.41
PABPC1-217ENST00000521067 NPHP3Q7Z494 1330 aa30.12■■■□□ 2.41
PABPC1-217ENST00000521067 YTHDC2Q9H6S0 1430 aaKnown RBP30.11■■■□□ 2.41
PABPC1-217ENST00000521067 CFAP70Q5T0N1 1121 aa30.09■■■□□ 2.41
PABPC1-217ENST00000521067 PXDNQ92626 1479 aa30.09■■■□□ 2.41
PABPC1-217ENST00000521067 RGS12O14924 1447 aa30.08■■■□□ 2.41
PABPC1-217ENST00000521067 FNBP4Q8N3X1 1017 aaPredicted RBP30.08■■■□□ 2.41
PABPC1-217ENST00000521067 ACIN1Q9UKV3 1341 aaKnown RBP30.07■■■□□ 2.4
PABPC1-217ENST00000521067 SIRT1Q96EB6 747 aa30.07■■■□□ 2.4
PABPC1-217ENST00000521067 USP21Q9UK80 565 aa30.07■■■□□ 2.4
PABPC1-217ENST00000521067 RAB3GAP2Q9H2M9 1393 aa30.06■■■□□ 2.4
PABPC1-217ENST00000521067 MYOM2P54296 1465 aa30.05■■■□□ 2.4
PABPC1-217ENST00000521067 NRXN1Q9ULB1 1477 aa30.05■■■□□ 2.4
PABPC1-217ENST00000521067 COL22A1Q8NFW1 1626 aaPredicted RBP30.03■■■□□ 2.4
PABPC1-217ENST00000521067 KNDC1Q76NI1 1749 aa30.02■■■□□ 2.4
PABPC1-217ENST00000521067 TRPC5Q9UL62 973 aaPredicted RBP30■■■□□ 2.39
PABPC1-217ENST00000521067 DHX57Q6P158 1386 aaKnown RBP29.99■■■□□ 2.39
PABPC1-217ENST00000521067 SAFB2Q14151 953 aaKnown RBP eCLIP29.97■■■□□ 2.39
PABPC1-217ENST00000521067 PRAM1Q96QH2 718 aa29.97■■■□□ 2.39
PABPC1-217ENST00000521067 SPATA31A3Q5VYP0 1347 aa29.96■■■□□ 2.39
PABPC1-217ENST00000521067 ATRNO75882 1429 aa29.96■■■□□ 2.39
PABPC1-217ENST00000521067 BCL9LQ86UU0 1499 aa29.95■■■□□ 2.39
PABPC1-217ENST00000521067 KRT28Q7Z3Y7 464 aa29.95■■■□□ 2.39
PABPC1-217ENST00000521067 FMN2Q9NZ56 1722 aa29.95■■■□□ 2.38
PABPC1-217ENST00000521067 PHF8Q9UPP1 1060 aa29.92■■■□□ 2.38
PABPC1-217ENST00000521067 KDM2AQ9Y2K7 1162 aa29.88■■■□□ 2.37
PABPC1-217ENST00000521067 POGKQ9P215 609 aa29.87■■■□□ 2.37
PABPC1-217ENST00000521067 DCAF11Q8TEB1 546 aa29.86■■■□□ 2.37
PABPC1-217ENST00000521067 TRAK1Q9UPV9 953 aa29.86■■■□□ 2.37
PABPC1-217ENST00000521067 EP400Q96L91 3159 aa29.86■■■□□ 2.37
PABPC1-217ENST00000521067 CABLES1Q8TDN4 633 aa29.85■■■□□ 2.37
PABPC1-217ENST00000521067 GJD4Q96KN9 370 aaPredicted RBP29.85■■■□□ 2.37
PABPC1-217ENST00000521067 ADGRB1O14514 1584 aa29.85■■■□□ 2.37
PABPC1-217ENST00000521067 KIF1AQ12756 1690 aa29.84■■■□□ 2.37
PABPC1-217ENST00000521067 SRCAPQ6ZRS2 3230 aa29.83■■■□□ 2.37
PABPC1-217ENST00000521067 RGPD8O14715 1765 aaPredicted RBP29.83■■■□□ 2.37
PABPC1-217ENST00000521067 DLC1Q96QB1 1528 aa29.83■■■□□ 2.37
PABPC1-217ENST00000521067 PSME1Q06323 249 aa29.83■■■□□ 2.37
PABPC1-217ENST00000521067 PMFBP1Q8TBY8 1022 aa29.83■■■□□ 2.37
PABPC1-217ENST00000521067 ATAD2Q6PL18 1390 aa29.82■■■□□ 2.36
PABPC1-217ENST00000521067 UNC5CLQ8IV45 518 aa29.82■■■□□ 2.36
PABPC1-217ENST00000521067 HIRIP3Q9BW71 556 aaPredicted RBP29.82■■■□□ 2.36
PABPC1-217ENST00000521067 HRCP23327 699 aa29.81■■■□□ 2.36
PABPC1-217ENST00000521067 SLIT2O94813 1529 aa29.81■■■□□ 2.36
PABPC1-217ENST00000521067 TNS3Q68CZ2 1445 aa29.8■■■□□ 2.36
PABPC1-217ENST00000521067 MARF1Q9Y4F3 1742 aaKnown RBP29.8■■■□□ 2.36
PABPC1-217ENST00000521067 PLEKHG5O94827 1062 aa29.8■■■□□ 2.36
PABPC1-217ENST00000521067 SBNO1A3KN83 1393 aa29.77■■■□□ 2.36
PABPC1-217ENST00000521067 MINK1Q8N4C8 1332 aaPredicted RBP29.77■■■□□ 2.36
PABPC1-217ENST00000521067 PRR36Q9H6K5 1346 aa29.76■■■□□ 2.36
PABPC1-217ENST00000521067 USP32Q8NFA0 1604 aa29.76■■■□□ 2.35
PABPC1-217ENST00000521067 LMOD2Q6P5Q4 547 aa29.76■■■□□ 2.35
PABPC1-217ENST00000521067 ANKARQ7Z5J8 1434 aa29.76■■■□□ 2.35
PABPC1-217ENST00000521067 RALGAPBQ86X10 1494 aa29.74■■■□□ 2.35
PABPC1-217ENST00000521067 HAP1P54257 671 aaPredicted RBP29.73■■■□□ 2.35
PABPC1-217ENST00000521067 STAC3Q96MF2 364 aa29.72■■■□□ 2.35
PABPC1-217ENST00000521067 WASLO00401 505 aaPredicted RBP29.71■■■□□ 2.35
PABPC1-217ENST00000521067 ADGRB2O60241 1585 aa29.71■■■□□ 2.35
PABPC1-217ENST00000521067 GLI3P10071 1580 aa29.7■■■□□ 2.35
PABPC1-217ENST00000521067 FAM83GA6ND36 823 aa29.7■■■□□ 2.35
PABPC1-217ENST00000521067 ARHGEF10O15013 1369 aa29.69■■■□□ 2.34
PABPC1-217ENST00000521067 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.68■■■□□ 2.34
PABPC1-217ENST00000521067 VPS72Q15906 364 aa29.67■■■□□ 2.34
PABPC1-217ENST00000521067 CCDC125Q86Z20 511 aa29.63■■■□□ 2.33
PABPC1-217ENST00000521067 SEPT12Q8IYM1 358 aa29.63■■■□□ 2.33
PABPC1-217ENST00000521067 TULP4Q9NRJ4 1543 aa29.62■■■□□ 2.33
PABPC1-217ENST00000521067 ONECUT3O60422 494 aaPredicted RBP29.62■■■□□ 2.33
PABPC1-217ENST00000521067 GPRASP1Q5JY77 1395 aa29.62■■■□□ 2.33
PABPC1-217ENST00000521067 EIF3AQ14152 1382 aaKnown RBP29.61■■■□□ 2.33
PABPC1-217ENST00000521067 TRPM3Q9HCF6 1732 aaPredicted RBP29.59■■■□□ 2.33
PABPC1-217ENST00000521067 NGDNQ8NEJ9 315 aaKnown RBP29.59■■■□□ 2.33
PABPC1-217ENST00000521067 CCDC9Q9Y3X0 531 aaKnown RBP29.59■■■□□ 2.33
PABPC1-217ENST00000521067 ABCA3Q99758 1704 aa29.59■■■□□ 2.33
PABPC1-217ENST00000521067 NUDT16Q96DE0 195 aaKnown RBP29.58■■■□□ 2.33
PABPC1-217ENST00000521067 BTG4Q9NY30 223 aa29.56■■■□□ 2.32
PABPC1-217ENST00000521067 PLCH1Q4KWH8 1693 aa29.56■■■□□ 2.32
PABPC1-217ENST00000521067 PAK3O75914 559 aaPredicted RBP29.55■■■□□ 2.32
PABPC1-217ENST00000521067 NBPF1Q3BBV0 1214 aa29.55■■■□□ 2.32
PABPC1-217ENST00000521067 CDK19Q9BWU1 502 aa29.55■■■□□ 2.32
PABPC1-217ENST00000521067 ALS2Q96Q42 1657 aa29.54■■■□□ 2.32
PABPC1-217ENST00000521067 NWD2Q9ULI1 1742 aa29.54■■■□□ 2.32
PABPC1-217ENST00000521067 ATP7BP35670 1465 aa29.53■■■□□ 2.32
PABPC1-217ENST00000521067 ARHGEF28Q8N1W1 1705 aaKnown RBP29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms