RNA–Protein interactions for RNA: ENST00000521005.1

VPS37A-208, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 3 BASIC

Gene VPS37A, Length 479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-208ENST00000521005 ZNF326Q5BKZ1 582 aaKnown RBP11.3□□□□□ -0.6
VPS37A-208ENST00000521005 FNBP4Q8N3X1 1017 aaPredicted RBP11.3□□□□□ -0.6
VPS37A-208ENST00000521005 USP21Q9UK80 565 aa11.3□□□□□ -0.6
VPS37A-208ENST00000521005 PPLO60437 1756 aa11.3□□□□□ -0.6
VPS37A-208ENST00000521005 ATAD2Q6PL18 1390 aa11.29□□□□□ -0.6
VPS37A-208ENST00000521005 PTCH1Q13635 1447 aa11.29□□□□□ -0.6
VPS37A-208ENST00000521005 BCL9LQ86UU0 1499 aa11.29□□□□□ -0.6
VPS37A-208ENST00000521005 MYOM2P54296 1465 aa11.28□□□□□ -0.6
VPS37A-208ENST00000521005 TRPC5Q9UL62 973 aaPredicted RBP11.28□□□□□ -0.6
VPS37A-208ENST00000521005 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.28□□□□□ -0.6
VPS37A-208ENST00000521005 PRAG1Q86YV5 1406 aa11.27□□□□□ -0.6
VPS37A-208ENST00000521005 PXDNQ92626 1479 aa11.27□□□□□ -0.6
VPS37A-208ENST00000521005 HOXD11P31277 338 aaPredicted RBP11.27□□□□□ -0.61
VPS37A-208ENST00000521005 ITGAEP38570 1179 aa11.27□□□□□ -0.61
VPS37A-208ENST00000521005 GLI3P10071 1580 aa11.26□□□□□ -0.61
VPS37A-208ENST00000521005 RGPD8O14715 1765 aaPredicted RBP11.26□□□□□ -0.61
VPS37A-208ENST00000521005 EP400Q96L91 3159 aa11.25□□□□□ -0.61
VPS37A-208ENST00000521005 CDC42BPGQ6DT37 1551 aa11.24□□□□□ -0.61
VPS37A-208ENST00000521005 ZRANB1Q9UGI0 708 aa11.23□□□□□ -0.61
VPS37A-208ENST00000521005 IFT172Q9UG01 1749 aa11.23□□□□□ -0.61
VPS37A-208ENST00000521005 HFM1A2PYH4 1435 aa11.22□□□□□ -0.61
VPS37A-208ENST00000521005 XPCQ01831 940 aaPredicted RBP11.22□□□□□ -0.61
VPS37A-208ENST00000521005 SRCAPQ6ZRS2 3230 aa11.22□□□□□ -0.61
VPS37A-208ENST00000521005 FMN2Q9NZ56 1722 aa11.21□□□□□ -0.61
VPS37A-208ENST00000521005 SLIT2O94813 1529 aa11.21□□□□□ -0.61
VPS37A-208ENST00000521005 PPARGC1BQ86YN6 1023 aaKnown RBP11.21□□□□□ -0.61
VPS37A-208ENST00000521005 GJD4Q96KN9 370 aaPredicted RBP11.21□□□□□ -0.61
VPS37A-208ENST00000521005 KNDC1Q76NI1 1749 aa11.21□□□□□ -0.62
VPS37A-208ENST00000521005 ABCA3Q99758 1704 aa11.21□□□□□ -0.62
VPS37A-208ENST00000521005 RALGAPBQ86X10 1494 aa11.2□□□□□ -0.62
VPS37A-208ENST00000521005 NAIPQ13075 1403 aa11.2□□□□□ -0.62
VPS37A-208ENST00000521005 VGFO15240 615 aaPredicted RBP11.2□□□□□ -0.62
VPS37A-208ENST00000521005 FOXO3O43524 673 aa11.2□□□□□ -0.62
VPS37A-208ENST00000521005 ESCO1Q5FWF5 840 aa11.2□□□□□ -0.62
VPS37A-208ENST00000521005 PLCH1Q4KWH8 1693 aa11.2□□□□□ -0.62
VPS37A-208ENST00000521005 USP32Q8NFA0 1604 aa11.2□□□□□ -0.62
VPS37A-208ENST00000521005 NPHP3Q7Z494 1330 aa11.19□□□□□ -0.62
VPS37A-208ENST00000521005 CCDC125Q86Z20 511 aa11.19□□□□□ -0.62
VPS37A-208ENST00000521005 LRP5O75197 1615 aa11.18□□□□□ -0.62
VPS37A-208ENST00000521005 NUTM2FA1L443 756 aa11.18□□□□□ -0.62
VPS37A-208ENST00000521005 WAPLQ7Z5K2 1190 aa11.18□□□□□ -0.62
VPS37A-208ENST00000521005 DEFB132Q7Z7B7 95 aa11.18□□□□□ -0.62
VPS37A-208ENST00000521005 NWD2Q9ULI1 1742 aa11.18□□□□□ -0.62
VPS37A-208ENST00000521005 KIF1AQ12756 1690 aa11.17□□□□□ -0.62
VPS37A-208ENST00000521005 PLEKHH1Q9ULM0 1364 aa11.17□□□□□ -0.62
VPS37A-208ENST00000521005 RPGRIP1LQ68CZ1 1315 aa11.17□□□□□ -0.62
VPS37A-208ENST00000521005 ADGRF5Q8IZF2 1346 aa11.17□□□□□ -0.62
VPS37A-208ENST00000521005 UNC5CLQ8IV45 518 aa11.17□□□□□ -0.62
VPS37A-208ENST00000521005 BLMP54132 1417 aaPredicted RBP11.17□□□□□ -0.62
VPS37A-208ENST00000521005 TECPR2O15040 1411 aa11.16□□□□□ -0.62
VPS37A-208ENST00000521005 NRAPQ86VF7 1730 aa11.15□□□□□ -0.62
VPS37A-208ENST00000521005 SPATA31A3Q5VYP0 1347 aa11.15□□□□□ -0.62
VPS37A-208ENST00000521005 RRBP1Q9P2E9 1410 aaKnown RBP11.14□□□□□ -0.63
VPS37A-208ENST00000521005 TMEM132EQ6IEE7 984 aa11.13□□□□□ -0.63
VPS37A-208ENST00000521005 SEPT12Q8IYM1 358 aa11.13□□□□□ -0.63
VPS37A-208ENST00000521005 STK26Q9P289 416 aa11.13□□□□□ -0.63
VPS37A-208ENST00000521005 LRPPRCP42704 1394 aaKnown RBP11.13□□□□□ -0.63
VPS37A-208ENST00000521005 SPATA31E1Q6ZUB1 1445 aa11.12□□□□□ -0.63
VPS37A-208ENST00000521005 ONECUT3O60422 494 aaPredicted RBP11.12□□□□□ -0.63
VPS37A-208ENST00000521005 KRT28Q7Z3Y7 464 aa11.12□□□□□ -0.63
VPS37A-208ENST00000521005 CABLES1Q8TDN4 633 aa11.12□□□□□ -0.63
VPS37A-208ENST00000521005 ABCC11Q96J66 1382 aa11.12□□□□□ -0.63
VPS37A-208ENST00000521005 TRPM3Q9HCF6 1732 aaPredicted RBP11.12□□□□□ -0.63
VPS37A-208ENST00000521005 VPS72Q15906 364 aa11.11□□□□□ -0.63
VPS37A-208ENST00000521005 CRYBG1Q9Y4K1 1723 aa11.11□□□□□ -0.63
VPS37A-208ENST00000521005 TNS1Q9HBL0 1735 aaKnown RBP11.1□□□□□ -0.63
VPS37A-208ENST00000521005 SLC4A1APQ9BWU0 796 aaKnown RBP11.1□□□□□ -0.63
VPS37A-208ENST00000521005 CCDC144AA2RUR9 1427 aa11.09□□□□□ -0.63
VPS37A-208ENST00000521005 PIK3C2GO75747 1445 aa11.09□□□□□ -0.63
VPS37A-208ENST00000521005 TNS3Q68CZ2 1445 aa11.09□□□□□ -0.63
VPS37A-208ENST00000521005 YTHDC2Q9H6S0 1430 aaKnown RBP11.09□□□□□ -0.63
VPS37A-208ENST00000521005 RGPD1P0DJD0 1748 aa11.09□□□□□ -0.63
VPS37A-208ENST00000521005 ALS2Q96Q42 1657 aa11.09□□□□□ -0.63
VPS37A-208ENST00000521005 NRXN1Q9ULB1 1477 aa11.09□□□□□ -0.63
VPS37A-208ENST00000521005 PSDA5PKW4 1024 aaPredicted RBP11.08□□□□□ -0.64
VPS37A-208ENST00000521005 FAM83GA6ND36 823 aa11.08□□□□□ -0.64
VPS37A-208ENST00000521005 PLEKHG5O94827 1062 aa11.08□□□□□ -0.64
VPS37A-208ENST00000521005 RGL3Q3MIN7 710 aa11.08□□□□□ -0.64
VPS37A-208ENST00000521005 KRT27Q7Z3Y8 459 aa11.07□□□□□ -0.64
VPS37A-208ENST00000521005 PHF8Q9UPP1 1060 aa11.07□□□□□ -0.64
VPS37A-208ENST00000521005 SBNO1A3KN83 1393 aa11.06□□□□□ -0.64
VPS37A-208ENST00000521005 COL14A1Q05707 1796 aaKnown RBP11.06□□□□□ -0.64
VPS37A-208ENST00000521005 THSD7AQ9UPZ6 1657 aa11.06□□□□□ -0.64
VPS37A-208ENST00000521005 HRCP23327 699 aa11.06□□□□□ -0.64
VPS37A-208ENST00000521005 ANKRD30BQ9BXX2 1392 aa11.05□□□□□ -0.64
VPS37A-208ENST00000521005 SF3B2Q13435 895 aaKnown RBP11.05□□□□□ -0.64
VPS37A-208ENST00000521005 FAM182BQ5T319 152 aa11.05□□□□□ -0.64
VPS37A-208ENST00000521005 SIRT1Q96EB6 747 aa11.05□□□□□ -0.64
VPS37A-208ENST00000521005 EN1Q05925 392 aaPredicted RBP11.04□□□□□ -0.64
VPS37A-208ENST00000521005 CCDC9Q9Y3X0 531 aaKnown RBP11.04□□□□□ -0.64
VPS37A-208ENST00000521005 ADGRB2O60241 1585 aa11.03□□□□□ -0.64
VPS37A-208ENST00000521005 PSME1Q06323 249 aa11.03□□□□□ -0.64
VPS37A-208ENST00000521005 FAM98CQ17RN3 349 aaKnown RBP11.03□□□□□ -0.64
VPS37A-208ENST00000521005 CFAP70Q5T0N1 1121 aa11.03□□□□□ -0.64
VPS37A-208ENST00000521005 PMFBP1Q8TBY8 1022 aa11.03□□□□□ -0.64
VPS37A-208ENST00000521005 C14orf93Q9H972 538 aaKnown RBP11.03□□□□□ -0.64
VPS37A-208ENST00000521005 HAP1P54257 671 aaPredicted RBP11.02□□□□□ -0.65
VPS37A-208ENST00000521005 ARHGEF10O15013 1369 aa11.02□□□□□ -0.65
VPS37A-208ENST00000521005 RREB1Q92766 1687 aa11.01□□□□□ -0.65
VPS37A-208ENST00000521005 BAG6P46379 1132 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms