RNA–Protein interactions for RNA: ENST00000520931.5

TNIP1-208, Transcript of TNFAIP3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNIP1, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-208ENST00000520931 NPATQ14207 1427 aa22.47■■□□□ 1.19
TNIP1-208ENST00000520931 C14orf93Q9H972 538 aaKnown RBP22.46■■□□□ 1.19
TNIP1-208ENST00000520931 TNNQ9UQP3 1299 aa22.46■■□□□ 1.19
TNIP1-208ENST00000520931 SBNO2Q9Y2G9 1366 aa22.46■■□□□ 1.19
TNIP1-208ENST00000520931 ADGRB3O60242 1522 aa22.45■■□□□ 1.18
TNIP1-208ENST00000520931 CLUAP1Q96AJ1 413 aa22.44■■□□□ 1.18
TNIP1-208ENST00000520931 MYO3AQ8NEV4 1616 aa22.44■■□□□ 1.18
TNIP1-208ENST00000520931 RUNDC1Q96C34 613 aa22.44■■□□□ 1.18
TNIP1-208ENST00000520931 QRICH2Q9H0J4 1663 aa22.44■■□□□ 1.18
TNIP1-208ENST00000520931 ZNF518AQ6AHZ1 1483 aa22.44■■□□□ 1.18
TNIP1-208ENST00000520931 CGNL1Q0VF96 1302 aa22.44■■□□□ 1.18
TNIP1-208ENST00000520931 NFKBIBQ15653 356 aa22.44■■□□□ 1.18
TNIP1-208ENST00000520931 PDE3AQ14432 1141 aa22.43■■□□□ 1.18
TNIP1-208ENST00000520931 SHPRHQ149N8 1683 aa22.43■■□□□ 1.18
TNIP1-208ENST00000520931 NGEFQ8N5V2 710 aa22.42■■□□□ 1.18
TNIP1-208ENST00000520931 RARSP54136 660 aaKnown RBP22.4■■□□□ 1.18
TNIP1-208ENST00000520931 RLBP1P12271 317 aa22.4■■□□□ 1.18
TNIP1-208ENST00000520931 PPLO60437 1756 aa22.39■■□□□ 1.18
TNIP1-208ENST00000520931 IL27Q8NEV9 243 aa22.39■■□□□ 1.18
TNIP1-208ENST00000520931 CABP2Q9NPB3 220 aa22.39■■□□□ 1.18
TNIP1-208ENST00000520931 NPM1P06748 294 aaKnown RBP eCLIP22.39■■□□□ 1.17
TNIP1-208ENST00000520931 SETBP1Q9Y6X0 1596 aa22.39■■□□□ 1.17
TNIP1-208ENST00000520931 LMTK2Q8IWU2 1503 aa22.38■■□□□ 1.17
TNIP1-208ENST00000520931 ADGRB1O14514 1584 aa22.38■■□□□ 1.17
TNIP1-208ENST00000520931 SEC24BO95487 1268 aa22.38■■□□□ 1.17
TNIP1-208ENST00000520931 U2AF1L5P0DN76 240 aaPredicted RBP22.38■■□□□ 1.17
TNIP1-208ENST00000520931 U2AF1Q01081 240 aaKnown RBP eCLIP22.38■■□□□ 1.17
TNIP1-208ENST00000520931 ZC3H13Q5T200 1668 aaKnown RBP22.37■■□□□ 1.17
TNIP1-208ENST00000520931 CFAP53Q96M91 514 aa22.36■■□□□ 1.17
TNIP1-208ENST00000520931 STK26Q9P289 416 aa22.36■■□□□ 1.17
TNIP1-208ENST00000520931 RAPGEF3O95398 923 aa22.35■■□□□ 1.17
TNIP1-208ENST00000520931 FRMPD1Q5SYB0 1578 aa22.35■■□□□ 1.17
TNIP1-208ENST00000520931 CD109Q6YHK3 1445 aa22.35■■□□□ 1.17
TNIP1-208ENST00000520931 PCDHB15Q9Y5E8 787 aa22.35■■□□□ 1.17
TNIP1-208ENST00000520931 RTN4Q9NQC3 1192 aaKnown RBP22.34■■□□□ 1.17
TNIP1-208ENST00000520931 EVC2Q86UK5 1308 aa22.33■■□□□ 1.17
TNIP1-208ENST00000520931 IQSEC2Q5JU85 1478 aa22.33■■□□□ 1.17
TNIP1-208ENST00000520931 POGZQ7Z3K3 1410 aa22.33■■□□□ 1.17
TNIP1-208ENST00000520931 USP19O94966 1318 aa22.32■■□□□ 1.16
TNIP1-208ENST00000520931 PHF23Q9BUL5 403 aaPredicted RBP22.32■■□□□ 1.16
TNIP1-208ENST00000520931 FRAT2O75474 233 aaPredicted RBP22.31■■□□□ 1.16
TNIP1-208ENST00000520931 WDR63Q8IWG1 891 aa22.31■■□□□ 1.16
TNIP1-208ENST00000520931 NINLQ9Y2I6 1382 aa22.31■■□□□ 1.16
TNIP1-208ENST00000520931 TSR2Q969E8 191 aaKnown RBP22.31■■□□□ 1.16
TNIP1-208ENST00000520931 U2SURPO15042 1029 aaKnown RBP22.3■■□□□ 1.16
TNIP1-208ENST00000520931 GLI2P10070 1586 aa22.3■■□□□ 1.16
TNIP1-208ENST00000520931 MAPK8IP3Q9UPT6 1336 aa22.29■■□□□ 1.16
TNIP1-208ENST00000520931 GSE1Q14687 1217 aa22.29■■□□□ 1.16
TNIP1-208ENST00000520931 GGNBP2Q9H3C7 697 aa22.29■■□□□ 1.16
TNIP1-208ENST00000520931 RPGRIP1LQ68CZ1 1315 aa22.29■■□□□ 1.16
TNIP1-208ENST00000520931 ABCC3O15438 1527 aa22.29■■□□□ 1.16
TNIP1-208ENST00000520931 TULP4Q9NRJ4 1543 aa22.29■■□□□ 1.16
TNIP1-208ENST00000520931 SRPK2P78362 688 aaKnown RBP22.29■■□□□ 1.16
TNIP1-208ENST00000520931 VGFO15240 615 aaPredicted RBP22.28■■□□□ 1.16
TNIP1-208ENST00000520931 SIGLEC1Q9BZZ2 1709 aa22.28■■□□□ 1.16
TNIP1-208ENST00000520931 ANKRD36BQ8N2N9 1353 aa22.27■■□□□ 1.16
TNIP1-208ENST00000520931 HECW2Q9P2P5 1572 aa22.27■■□□□ 1.16
TNIP1-208ENST00000520931 PDZRN3Q9UPQ7 1066 aa22.26■■□□□ 1.15
TNIP1-208ENST00000520931 MLH3Q9UHC1 1453 aa22.26■■□□□ 1.15
TNIP1-208ENST00000520931 IDI1Q13907 227 aa22.26■■□□□ 1.15
TNIP1-208ENST00000520931 PMFBP1Q8TBY8 1022 aa22.26■■□□□ 1.15
TNIP1-208ENST00000520931 VIRMAQ69YN4 1812 aaKnown RBP22.26■■□□□ 1.15
TNIP1-208ENST00000520931 MYH16Q9H6N6 1097 aa22.25■■□□□ 1.15
TNIP1-208ENST00000520931 ARHGEF28Q8N1W1 1705 aaKnown RBP22.24■■□□□ 1.15
TNIP1-208ENST00000520931 MINK1Q8N4C8 1332 aaPredicted RBP22.24■■□□□ 1.15
TNIP1-208ENST00000520931 CCDC27Q2M243 656 aa22.24■■□□□ 1.15
TNIP1-208ENST00000520931 A0A1W2PP64 1363 aa22.23■■□□□ 1.15
TNIP1-208ENST00000520931 CAMSAP1Q5T5Y3 1602 aa22.23■■□□□ 1.15
TNIP1-208ENST00000520931 FTSJ3Q8IY81 847 aaKnown RBP22.23■■□□□ 1.15
TNIP1-208ENST00000520931 USP32Q8NFA0 1604 aa22.22■■□□□ 1.15
TNIP1-208ENST00000520931 SLKQ9H2G2 1235 aaPredicted RBP22.22■■□□□ 1.15
TNIP1-208ENST00000520931 BRPF3Q9ULD4 1205 aa22.22■■□□□ 1.15
TNIP1-208ENST00000520931 EXOSC9Q06265 439 aaKnown RBP22.21■■□□□ 1.15
TNIP1-208ENST00000520931 NEXMIFQ5QGS0 1516 aa22.21■■□□□ 1.15
TNIP1-208ENST00000520931 SMC4Q9NTJ3 1288 aa22.2■■□□□ 1.14
TNIP1-208ENST00000520931 MVPQ14764 893 aaKnown RBP22.19■■□□□ 1.14
TNIP1-208ENST00000520931 ZKSCAN2Q63HK3 967 aa22.19■■□□□ 1.14
TNIP1-208ENST00000520931 RWDD1Q9H446 243 aaPredicted RBP22.19■■□□□ 1.14
TNIP1-208ENST00000520931 DZIP1LQ8IYY4 767 aaKnown RBP22.18■■□□□ 1.14
TNIP1-208ENST00000520931 NSD2O96028 1365 aa22.17■■□□□ 1.14
TNIP1-208ENST00000520931 TMPOP42166 694 aaKnown RBP22.17■■□□□ 1.14
TNIP1-208ENST00000520931 PRAM1Q96QH2 718 aa22.17■■□□□ 1.14
TNIP1-208ENST00000520931 POGKQ9P215 609 aa22.16■■□□□ 1.14
TNIP1-208ENST00000520931 CFAP74Q9C0B2 1584 aa22.16■■□□□ 1.14
TNIP1-208ENST00000520931 TRIM35Q9UPQ4 493 aa22.16■■□□□ 1.14
TNIP1-208ENST00000520931 NLRP1Q9C000 1473 aa22.16■■□□□ 1.14
TNIP1-208ENST00000520931 SSH1Q8WYL5 1049 aa22.15■■□□□ 1.14
TNIP1-208ENST00000520931 PLEKHF1Q96S99 279 aa22.15■■□□□ 1.14
TNIP1-208ENST00000520931 FYB1O15117 783 aa22.15■■□□□ 1.14
TNIP1-208ENST00000520931 ITPRIPQ8IWB1 547 aa22.15■■□□□ 1.14
TNIP1-208ENST00000520931 ABCC11Q96J66 1382 aa22.15■■□□□ 1.14
TNIP1-208ENST00000520931 TRIM27P14373 513 aa22.14■■□□□ 1.14
TNIP1-208ENST00000520931 PUS7Q96PZ0 661 aaKnown RBP22.14■■□□□ 1.14
TNIP1-208ENST00000520931 MYO5BQ9ULV0 1848 aa22.14■■□□□ 1.14
TNIP1-208ENST00000520931 PIK3C2BO00750 1634 aa22.14■■□□□ 1.14
TNIP1-208ENST00000520931 FBLN1P23142 703 aa22.14■■□□□ 1.13
TNIP1-208ENST00000520931 BECN1Q14457 450 aa22.14■■□□□ 1.13
TNIP1-208ENST00000520931 OSCARQ8IYS5 282 aa22.14■■□□□ 1.13
TNIP1-208ENST00000520931 UPF2Q9HAU5 1272 aaKnown RBP22.14■■□□□ 1.13
TNIP1-208ENST00000520931 AAMPQ13685 434 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms