RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 AAASQ9NRG9 546 aa11.47□□□□□ -0.57
CLK4-207ENST00000520909 MINK1Q8N4C8 1332 aaPredicted RBP11.45□□□□□ -0.58
CLK4-207ENST00000520909 KDM4AO75164 1064 aa11.45□□□□□ -0.58
CLK4-207ENST00000520909 CYP4X1Q8N118 509 aa11.45□□□□□ -0.58
CLK4-207ENST00000520909 MDM2Q00987 491 aaPredicted RBP11.43□□□□□ -0.58
CLK4-207ENST00000520909 TOR4AQ9NXH8 423 aa11.43□□□□□ -0.58
CLK4-207ENST00000520909 USP46P62068 366 aa11.41□□□□□ -0.58
CLK4-207ENST00000520909 USB1Q9BQ65 265 aaKnown RBP11.4□□□□□ -0.58
CLK4-207ENST00000520909 MMP16P51512 607 aa11.39□□□□□ -0.59
CLK4-207ENST00000520909 TTC24A2A3L6 582 aaPredicted RBP11.38□□□□□ -0.59
CLK4-207ENST00000520909 AVPP01185 164 aa11.37□□□□□ -0.59
CLK4-207ENST00000520909 CRIPAKQ8N1N5 446 aa11.37□□□□□ -0.59
CLK4-207ENST00000520909 KRI1Q8N9T8 703 aaKnown RBP11.36□□□□□ -0.59
CLK4-207ENST00000520909 CCDC102AQ96A19 550 aa11.36□□□□□ -0.59
CLK4-207ENST00000520909 DACH1Q9UI36 760 aa11.36□□□□□ -0.59
CLK4-207ENST00000520909 WNT7AO00755 349 aa11.35□□□□□ -0.59
CLK4-207ENST00000520909 AXIN1O15169 862 aa11.35□□□□□ -0.59
CLK4-207ENST00000520909 CLCN1P35523 988 aa11.35□□□□□ -0.59
CLK4-207ENST00000520909 TRIM32Q13049 653 aa11.35□□□□□ -0.59
CLK4-207ENST00000520909 CTC1Q2NKJ3 1217 aa11.35□□□□□ -0.59
CLK4-207ENST00000520909 DXOO77932 396 aaKnown RBP11.35□□□□□ -0.59
CLK4-207ENST00000520909 GPCPD1Q9NPB8 672 aa11.35□□□□□ -0.59
CLK4-207ENST00000520909 HOXA2O43364 376 aa11.34□□□□□ -0.59
CLK4-207ENST00000520909 WFS1O76024 890 aa11.34□□□□□ -0.59
CLK4-207ENST00000520909 CCDC24Q8N4L8 307 aa11.34□□□□□ -0.59
CLK4-207ENST00000520909 SNIP1Q8TAD8 396 aaKnown RBP11.34□□□□□ -0.59
CLK4-207ENST00000520909 HLA-CQ95604 372 aa11.34□□□□□ -0.59
CLK4-207ENST00000520909 NUTM1Q86Y26 1132 aa11.32□□□□□ -0.6
CLK4-207ENST00000520909 FAM217BQ9NTX9 383 aaPredicted RBP11.32□□□□□ -0.6
CLK4-207ENST00000520909 SMCPP49901 116 aaPredicted RBP11.31□□□□□ -0.6
CLK4-207ENST00000520909 GMPR2Q9P2T1 348 aaKnown RBP11.31□□□□□ -0.6
CLK4-207ENST00000520909 MRGPRX2Q96LB1 330 aa11.3□□□□□ -0.6
CLK4-207ENST00000520909 STK17AQ9UEE5 414 aa11.3□□□□□ -0.6
CLK4-207ENST00000520909 C11orf95C9JLR9 678 aaPredicted RBP11.29□□□□□ -0.6
CLK4-207ENST00000520909 NFX1Q12986 1120 aaKnown RBP11.29□□□□□ -0.6
CLK4-207ENST00000520909 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.29□□□□□ -0.6
CLK4-207ENST00000520909 REPIN1Q9BWE0 567 aaKnown RBP11.29□□□□□ -0.6
CLK4-207ENST00000520909 SMPD1P17405 629 aa11.28□□□□□ -0.6
CLK4-207ENST00000520909 GUCA2AQ02747 115 aa11.28□□□□□ -0.6
CLK4-207ENST00000520909 WIPF1O43516 503 aa11.26□□□□□ -0.61
CLK4-207ENST00000520909 JUNDP17535 347 aa11.26□□□□□ -0.61
CLK4-207ENST00000520909 SYMPKQ92797 1274 aaKnown RBP11.26□□□□□ -0.61
CLK4-207ENST00000520909 J3QL48 77 aa11.25□□□□□ -0.61
CLK4-207ENST00000520909 RC3H1Q5TC82 1133 aaKnown RBP11.25□□□□□ -0.61
CLK4-207ENST00000520909 WNT7BP56706 349 aa11.24□□□□□ -0.61
CLK4-207ENST00000520909 RETREG3Q86VR2 466 aa11.24□□□□□ -0.61
CLK4-207ENST00000520909 FDX1P10109 184 aa11.23□□□□□ -0.61
CLK4-207ENST00000520909 SSTR3P32745 418 aaPredicted RBP11.22□□□□□ -0.61
CLK4-207ENST00000520909 SKOR1P84550 965 aa11.21□□□□□ -0.61
CLK4-207ENST00000520909 INSM1Q01101 510 aaPredicted RBP11.21□□□□□ -0.61
CLK4-207ENST00000520909 C6orf229H3BNL8 230 aa11.2□□□□□ -0.62
CLK4-207ENST00000520909 NUDT12Q9BQG2 462 aa11.2□□□□□ -0.62
CLK4-207ENST00000520909 HPS1Q92902 700 aa11.19□□□□□ -0.62
CLK4-207ENST00000520909 ATP13A2Q9NQ11 1180 aa11.19□□□□□ -0.62
CLK4-207ENST00000520909 LCE2CQ5TA81 110 aa11.18□□□□□ -0.62
CLK4-207ENST00000520909 SPIRE2Q8WWL2 714 aa11.18□□□□□ -0.62
CLK4-207ENST00000520909 PCDHGC3Q9UN70 934 aa11.18□□□□□ -0.62
CLK4-207ENST00000520909 TTLL12Q14166 644 aaPredicted RBP11.17□□□□□ -0.62
CLK4-207ENST00000520909 PTCRAQ6ISU1 281 aaPredicted RBP11.17□□□□□ -0.62
CLK4-207ENST00000520909 BARGINQ6ZT62 677 aa11.17□□□□□ -0.62
CLK4-207ENST00000520909 SENP2Q9HC62 589 aa11.16□□□□□ -0.62
CLK4-207ENST00000520909 ZMYND10O75800 440 aa11.15□□□□□ -0.62
CLK4-207ENST00000520909 ALDH1A1P00352 501 aa11.15□□□□□ -0.62
CLK4-207ENST00000520909 MS4A1P11836 297 aa11.15□□□□□ -0.62
CLK4-207ENST00000520909 CCNYL3P0C7X3 344 aa11.14□□□□□ -0.63
CLK4-207ENST00000520909 EHBP1Q8NDI1 1231 aa11.14□□□□□ -0.63
CLK4-207ENST00000520909 NDUFV2P19404 249 aa11.13□□□□□ -0.63
CLK4-207ENST00000520909 MOXD2PA6NHM9 499 aa11.12□□□□□ -0.63
CLK4-207ENST00000520909 TERTO14746 1132 aaKnown RBP11.12□□□□□ -0.63
CLK4-207ENST00000520909 SNRPBP14678 240 aaKnown RBP11.12□□□□□ -0.63
CLK4-207ENST00000520909 TRIM47Q96LD4 638 aa11.12□□□□□ -0.63
CLK4-207ENST00000520909 AMHR2Q16671 573 aa11.11□□□□□ -0.63
CLK4-207ENST00000520909 EVA1BQ9NVM1 165 aa11.11□□□□□ -0.63
CLK4-207ENST00000520909 SPDYE5A6NIY4 337 aa11.1□□□□□ -0.63
CLK4-207ENST00000520909 SIAH2O43255 324 aa11.1□□□□□ -0.63
CLK4-207ENST00000520909 PTPRNQ16849 979 aa11.1□□□□□ -0.63
CLK4-207ENST00000520909 GIGYF2Q6Y7W6 1299 aaKnown RBP11.1□□□□□ -0.63
CLK4-207ENST00000520909 ZC3H15Q8WU90 426 aaKnown RBP11.1□□□□□ -0.63
CLK4-207ENST00000520909 KIFC2Q96AC6 838 aa11.1□□□□□ -0.63
CLK4-207ENST00000520909 SH3BP2P78314 561 aa11.09□□□□□ -0.63
CLK4-207ENST00000520909 PRR7Q8TB68 274 aa11.09□□□□□ -0.63
CLK4-207ENST00000520909 WASF2Q9Y6W5 498 aa11.09□□□□□ -0.63
CLK4-207ENST00000520909 MTMR2Q13614 643 aa11.09□□□□□ -0.63
CLK4-207ENST00000520909 BEGAINQ9BUH8 593 aa11.09□□□□□ -0.63
CLK4-207ENST00000520909 DIXDC1Q155Q3 683 aa11.08□□□□□ -0.64
CLK4-207ENST00000520909 UNC93B1Q9H1C4 597 aa11.08□□□□□ -0.64
CLK4-207ENST00000520909 KCNH2Q12809 1159 aa11.07□□□□□ -0.64
CLK4-207ENST00000520909 DESI1Q6ICB0 168 aa11.07□□□□□ -0.64
CLK4-207ENST00000520909 BAP1Q92560 729 aa11.06□□□□□ -0.64
CLK4-207ENST00000520909 CAPN5O15484 640 aaPredicted RBP11.05□□□□□ -0.64
CLK4-207ENST00000520909 GJA5P36382 358 aa11.05□□□□□ -0.64
CLK4-207ENST00000520909 LINC01559Q495D7 138 aa11.04□□□□□ -0.64
CLK4-207ENST00000520909 TBC1D2Q9BYX2 928 aa11.04□□□□□ -0.64
CLK4-207ENST00000520909 PLEKHG3A1L390 1219 aa11.02□□□□□ -0.65
CLK4-207ENST00000520909 VARSP26640 1264 aaKnown RBP11.01□□□□□ -0.65
CLK4-207ENST00000520909 RSBN1LQ6PCB5 846 aaPredicted RBP11.01□□□□□ -0.65
CLK4-207ENST00000520909 ZNF511Q8NB15 262 aa11.01□□□□□ -0.65
CLK4-207ENST00000520909 TRIM66O15016 1216 aa11□□□□□ -0.65
CLK4-207ENST00000520909 CTHP32929 405 aa11□□□□□ -0.65
CLK4-207ENST00000520909 PARP9Q8IXQ6 854 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms