RNA–Protein interactions for RNA: ENST00000520630.1

CSMD1-209, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 312 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-209ENST00000520630 CCDC125Q86Z20 511 aa12.57□□□□□ -0.4
CSMD1-209ENST00000520630 PXDNQ92626 1479 aa12.57□□□□□ -0.4
CSMD1-209ENST00000520630 DEFB132Q7Z7B7 95 aa12.56□□□□□ -0.4
CSMD1-209ENST00000520630 PPLO60437 1756 aa12.56□□□□□ -0.4
CSMD1-209ENST00000520630 NWD2Q9ULI1 1742 aa12.55□□□□□ -0.4
CSMD1-209ENST00000520630 BLMP54132 1417 aaPredicted RBP12.54□□□□□ -0.4
CSMD1-209ENST00000520630 TNS1Q9HBL0 1735 aaKnown RBP12.54□□□□□ -0.4
CSMD1-209ENST00000520630 LOC105371045A0A1W2PR82 267 aa12.54□□□□□ -0.4
CSMD1-209ENST00000520630 RALGAPBQ86X10 1494 aa12.53□□□□□ -0.4
CSMD1-209ENST00000520630 SLIT2O94813 1529 aa12.53□□□□□ -0.4
CSMD1-209ENST00000520630 GJD4Q96KN9 370 aaPredicted RBP12.53□□□□□ -0.4
CSMD1-209ENST00000520630 USP32Q8NFA0 1604 aa12.52□□□□□ -0.4
CSMD1-209ENST00000520630 RGPD1P0DJD0 1748 aa12.52□□□□□ -0.41
CSMD1-209ENST00000520630 NRAPQ86VF7 1730 aa12.52□□□□□ -0.41
CSMD1-209ENST00000520630 ROBO2Q9HCK4 1378 aa12.52□□□□□ -0.41
CSMD1-209ENST00000520630 PRAG1Q86YV5 1406 aa12.5□□□□□ -0.41
CSMD1-209ENST00000520630 CDC42BPGQ6DT37 1551 aa12.5□□□□□ -0.41
CSMD1-209ENST00000520630 FMN2Q9NZ56 1722 aa12.5□□□□□ -0.41
CSMD1-209ENST00000520630 FOXD1Q16676 465 aa12.49□□□□□ -0.41
CSMD1-209ENST00000520630 IFT172Q9UG01 1749 aa12.48□□□□□ -0.41
CSMD1-209ENST00000520630 PSDA5PKW4 1024 aaPredicted RBP12.47□□□□□ -0.41
CSMD1-209ENST00000520630 HRCP23327 699 aa12.47□□□□□ -0.41
CSMD1-209ENST00000520630 KNDC1Q76NI1 1749 aa12.45□□□□□ -0.42
CSMD1-209ENST00000520630 XPCQ01831 940 aaPredicted RBP12.45□□□□□ -0.42
CSMD1-209ENST00000520630 UNC5CLQ8IV45 518 aa12.45□□□□□ -0.42
CSMD1-209ENST00000520630 KIF1AQ12756 1690 aa12.45□□□□□ -0.42
CSMD1-209ENST00000520630 NUP155O75694 1391 aa12.44□□□□□ -0.42
CSMD1-209ENST00000520630 CRYBG1Q9Y4K1 1723 aa12.44□□□□□ -0.42
CSMD1-209ENST00000520630 RREB1Q92766 1687 aa12.44□□□□□ -0.42
CSMD1-209ENST00000520630 NUP188Q5SRE5 1749 aa12.43□□□□□ -0.42
CSMD1-209ENST00000520630 ONECUT3O60422 494 aaPredicted RBP12.43□□□□□ -0.42
CSMD1-209ENST00000520630 FAM50AQ14320 339 aaKnown RBP12.43□□□□□ -0.42
CSMD1-209ENST00000520630 ROCK1Q13464 1354 aa12.43□□□□□ -0.42
CSMD1-209ENST00000520630 ZNF326Q5BKZ1 582 aaKnown RBP12.42□□□□□ -0.42
CSMD1-209ENST00000520630 SEPT12Q8IYM1 358 aa12.42□□□□□ -0.42
CSMD1-209ENST00000520630 CAMTA1Q9Y6Y1 1673 aa12.42□□□□□ -0.42
CSMD1-209ENST00000520630 NPHP3Q7Z494 1330 aa12.41□□□□□ -0.42
CSMD1-209ENST00000520630 FOXO3O43524 673 aa12.41□□□□□ -0.42
CSMD1-209ENST00000520630 TRPM3Q9HCF6 1732 aaPredicted RBP12.41□□□□□ -0.42
CSMD1-209ENST00000520630 THSD7AQ9UPZ6 1657 aa12.41□□□□□ -0.42
CSMD1-209ENST00000520630 HFM1A2PYH4 1435 aa12.4□□□□□ -0.42
CSMD1-209ENST00000520630 ESCO1Q5FWF5 840 aa12.4□□□□□ -0.42
CSMD1-209ENST00000520630 CHD4Q14839 1912 aa12.39□□□□□ -0.43
CSMD1-209ENST00000520630 ALS2Q96Q42 1657 aa12.38□□□□□ -0.43
CSMD1-209ENST00000520630 SPATA31A3Q5VYP0 1347 aa12.38□□□□□ -0.43
CSMD1-209ENST00000520630 NAIPQ13075 1403 aa12.38□□□□□ -0.43
CSMD1-209ENST00000520630 VPS72Q15906 364 aa12.38□□□□□ -0.43
CSMD1-209ENST00000520630 UTRNP46939 3433 aa12.38□□□□□ -0.43
CSMD1-209ENST00000520630 KRT27Q7Z3Y8 459 aa12.37□□□□□ -0.43
CSMD1-209ENST00000520630 EN1Q05925 392 aaPredicted RBP12.36□□□□□ -0.43
CSMD1-209ENST00000520630 SBF2Q86WG5 1849 aa12.36□□□□□ -0.43
CSMD1-209ENST00000520630 COL14A1Q05707 1796 aaKnown RBP12.35□□□□□ -0.43
CSMD1-209ENST00000520630 NUTM2FA1L443 756 aa12.35□□□□□ -0.43
CSMD1-209ENST00000520630 SF3B2Q13435 895 aaKnown RBP12.35□□□□□ -0.43
CSMD1-209ENST00000520630 R3HDM1Q15032 1099 aaKnown RBP12.35□□□□□ -0.43
CSMD1-209ENST00000520630 FAM182BQ5T319 152 aa12.35□□□□□ -0.43
CSMD1-209ENST00000520630 CABLES1Q8TDN4 633 aa12.35□□□□□ -0.43
CSMD1-209ENST00000520630 DISP2A7MBM2 1401 aa12.35□□□□□ -0.43
CSMD1-209ENST00000520630 PLEKHH1Q9ULM0 1364 aa12.34□□□□□ -0.43
CSMD1-209ENST00000520630 TECPR2O15040 1411 aa12.34□□□□□ -0.43
CSMD1-209ENST00000520630 BAG6P46379 1132 aa12.33□□□□□ -0.44
CSMD1-209ENST00000520630 APLP2Q06481 763 aa12.33□□□□□ -0.44
CSMD1-209ENST00000520630 WAPLQ7Z5K2 1190 aa12.33□□□□□ -0.44
CSMD1-209ENST00000520630 TNS3Q68CZ2 1445 aa12.33□□□□□ -0.44
CSMD1-209ENST00000520630 FAM83GA6ND36 823 aa12.32□□□□□ -0.44
CSMD1-209ENST00000520630 CCDC144AA2RUR9 1427 aa12.31□□□□□ -0.44
CSMD1-209ENST00000520630 EZH2Q15910 746 aaKnown RBP12.31□□□□□ -0.44
CSMD1-209ENST00000520630 KRT28Q7Z3Y7 464 aa12.31□□□□□ -0.44
CSMD1-209ENST00000520630 LRPPRCP42704 1394 aaKnown RBP12.3□□□□□ -0.44
CSMD1-209ENST00000520630 CASZ1Q86V15 1759 aa12.3□□□□□ -0.44
CSMD1-209ENST00000520630 VGFO15240 615 aaPredicted RBP12.3□□□□□ -0.44
CSMD1-209ENST00000520630 YY1P25490 414 aa12.3□□□□□ -0.44
CSMD1-209ENST00000520630 NRXN1Q9ULB1 1477 aa12.29□□□□□ -0.44
CSMD1-209ENST00000520630 FAM98CQ17RN3 349 aaKnown RBP12.29□□□□□ -0.44
CSMD1-209ENST00000520630 CAMKK2Q96RR4 588 aa12.29□□□□□ -0.44
CSMD1-209ENST00000520630 ADGRB2O60241 1585 aa12.29□□□□□ -0.44
CSMD1-209ENST00000520630 ADGRF5Q8IZF2 1346 aa12.28□□□□□ -0.44
CSMD1-209ENST00000520630 PHRF1Q9P1Y6 1649 aaKnown RBP12.27□□□□□ -0.44
CSMD1-209ENST00000520630 CCDC9Q9Y3X0 531 aaKnown RBP12.27□□□□□ -0.45
CSMD1-209ENST00000520630 PLEKHG5O94827 1062 aa12.26□□□□□ -0.45
CSMD1-209ENST00000520630 RPGRIP1LQ68CZ1 1315 aa12.26□□□□□ -0.45
CSMD1-209ENST00000520630 SBNO1A3KN83 1393 aa12.26□□□□□ -0.45
CSMD1-209ENST00000520630 ABCC11Q96J66 1382 aa12.26□□□□□ -0.45
CSMD1-209ENST00000520630 RGPD3A6NKT7 1758 aaPredicted RBP12.25□□□□□ -0.45
CSMD1-209ENST00000520630 RGPD4Q7Z3J3 1758 aa12.25□□□□□ -0.45
CSMD1-209ENST00000520630 ITGAEP38570 1179 aa12.25□□□□□ -0.45
CSMD1-209ENST00000520630 STK26Q9P289 416 aa12.25□□□□□ -0.45
CSMD1-209ENST00000520630 MYOM1P52179 1685 aa12.24□□□□□ -0.45
CSMD1-209ENST00000520630 SPATA31A5Q5VU36 1347 aa12.24□□□□□ -0.45
CSMD1-209ENST00000520630 TMEM132EQ6IEE7 984 aa12.24□□□□□ -0.45
CSMD1-209ENST00000520630 SPATA31A7Q8IWB4 1347 aa12.24□□□□□ -0.45
CSMD1-209ENST00000520630 PEAK1Q9H792 1746 aa12.24□□□□□ -0.45
CSMD1-209ENST00000520630 RRBP1Q9P2E9 1410 aaKnown RBP12.23□□□□□ -0.45
CSMD1-209ENST00000520630 BTG4Q9NY30 223 aa12.23□□□□□ -0.45
CSMD1-209ENST00000520630 PHF8Q9UPP1 1060 aa12.23□□□□□ -0.45
CSMD1-209ENST00000520630 SPATA31E1Q6ZUB1 1445 aa12.22□□□□□ -0.45
CSMD1-209ENST00000520630 YTHDC2Q9H6S0 1430 aaKnown RBP12.22□□□□□ -0.45
CSMD1-209ENST00000520630 PARP4Q9UKK3 1724 aaKnown RBP12.22□□□□□ -0.45
CSMD1-209ENST00000520630 PIK3C2GO75747 1445 aa12.21□□□□□ -0.45
CSMD1-209ENST00000520630 WNK3Q9BYP7 1800 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms