RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 TCP11L2Q8N4U5 519 aa12.51□□□□□ -0.41
PDGFRB-207ENST00000520579 KIF21AQ7Z4S6 1674 aa12.51□□□□□ -0.41
PDGFRB-207ENST00000520579 RARSP54136 660 aaKnown RBP12.51□□□□□ -0.41
PDGFRB-207ENST00000520579 CHMP4CQ96CF2 233 aa12.51□□□□□ -0.41
PDGFRB-207ENST00000520579 TESK2Q96S53 571 aa12.51□□□□□ -0.41
PDGFRB-207ENST00000520579 PZPP20742 1482 aa12.51□□□□□ -0.41
PDGFRB-207ENST00000520579 ANKRD50Q9ULJ7 1429 aa12.51□□□□□ -0.41
PDGFRB-207ENST00000520579 EHBP1L1Q8N3D4 1523 aa12.51□□□□□ -0.41
PDGFRB-207ENST00000520579 SAFB2Q14151 953 aaKnown RBP eCLIP12.5□□□□□ -0.41
PDGFRB-207ENST00000520579 PRG4Q92954 1404 aaPredicted RBP12.5□□□□□ -0.41
PDGFRB-207ENST00000520579 MRC2Q9UBG0 1479 aa12.5□□□□□ -0.41
PDGFRB-207ENST00000520579 HECW1Q76N89 1606 aa12.5□□□□□ -0.41
PDGFRB-207ENST00000520579 DNMBPQ6XZF7 1577 aa12.5□□□□□ -0.41
PDGFRB-207ENST00000520579 UGGT2Q9NYU1 1516 aa12.5□□□□□ -0.41
PDGFRB-207ENST00000520579 DTNBO60941 627 aa12.5□□□□□ -0.41
PDGFRB-207ENST00000520579 HSP90B1P14625 803 aaKnown RBP12.5□□□□□ -0.41
PDGFRB-207ENST00000520579 ANKRD30AQ9BXX3 1397 aa12.5□□□□□ -0.41
PDGFRB-207ENST00000520579 MYCNP04198 464 aaPredicted RBP12.5□□□□□ -0.41
PDGFRB-207ENST00000520579 CCDC173Q0VFZ6 552 aa12.5□□□□□ -0.41
PDGFRB-207ENST00000520579 PDE3AQ14432 1141 aa12.5□□□□□ -0.41
PDGFRB-207ENST00000520579 GAS2L2Q8NHY3 880 aa12.5□□□□□ -0.41
PDGFRB-207ENST00000520579 ZNF608Q9ULD9 1512 aaPredicted RBP12.49□□□□□ -0.41
PDGFRB-207ENST00000520579 SOX12O15370 315 aa12.49□□□□□ -0.41
PDGFRB-207ENST00000520579 MORC1Q86VD1 984 aa12.49□□□□□ -0.41
PDGFRB-207ENST00000520579 RGS22Q8NE09 1264 aa12.49□□□□□ -0.41
PDGFRB-207ENST00000520579 PKP1Q13835 747 aa12.49□□□□□ -0.41
PDGFRB-207ENST00000520579 SYCE3A1L190 88 aa12.48□□□□□ -0.41
PDGFRB-207ENST00000520579 OFD1O75665 1012 aa12.48□□□□□ -0.41
PDGFRB-207ENST00000520579 DZIP1LQ8IYY4 767 aaKnown RBP12.48□□□□□ -0.41
PDGFRB-207ENST00000520579 EIF3AQ14152 1382 aaKnown RBP12.48□□□□□ -0.41
PDGFRB-207ENST00000520579 RBSNQ9H1K0 784 aa12.48□□□□□ -0.41
PDGFRB-207ENST00000520579 THOC2Q8NI27 1593 aaKnown RBP12.48□□□□□ -0.41
PDGFRB-207ENST00000520579 GRIN2BQ13224 1484 aa12.48□□□□□ -0.41
PDGFRB-207ENST00000520579 PRIM1P49642 420 aaKnown RBP12.47□□□□□ -0.41
PDGFRB-207ENST00000520579 DMTNQ08495 405 aa12.47□□□□□ -0.41
PDGFRB-207ENST00000520579 NKTRP30414 1462 aaKnown RBP12.47□□□□□ -0.41
PDGFRB-207ENST00000520579 CAMSAP2Q08AD1 1489 aa12.47□□□□□ -0.41
PDGFRB-207ENST00000520579 ERBINQ96RT1 1412 aa12.46□□□□□ -0.41
PDGFRB-207ENST00000520579 ZKSCAN2Q63HK3 967 aa12.46□□□□□ -0.41
PDGFRB-207ENST00000520579 EPRSP07814 1512 aaKnown RBP12.46□□□□□ -0.41
PDGFRB-207ENST00000520579 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.46□□□□□ -0.41
PDGFRB-207ENST00000520579 EXOSC9Q06265 439 aaKnown RBP12.46□□□□□ -0.41
PDGFRB-207ENST00000520579 ZNF771Q7L3S4 317 aaPredicted RBP12.46□□□□□ -0.42
PDGFRB-207ENST00000520579 CCDC144AA2RUR9 1427 aa12.46□□□□□ -0.42
PDGFRB-207ENST00000520579 BLMP54132 1417 aaPredicted RBP12.46□□□□□ -0.42
PDGFRB-207ENST00000520579 KDM5CP41229 1560 aa12.45□□□□□ -0.42
PDGFRB-207ENST00000520579 BAG4O95429 457 aaKnown RBP12.45□□□□□ -0.42
PDGFRB-207ENST00000520579 GDPD2Q9HCC8 539 aa12.45□□□□□ -0.42
PDGFRB-207ENST00000520579 ZMYM4Q5VZL5 1548 aa12.45□□□□□ -0.42
PDGFRB-207ENST00000520579 TMED8Q6PL24 325 aaPredicted RBP12.44□□□□□ -0.42
PDGFRB-207ENST00000520579 PLEKHD1A6NEE1 506 aa12.44□□□□□ -0.42
PDGFRB-207ENST00000520579 ZNF526Q8TF50 670 aaPredicted RBP12.44□□□□□ -0.42
PDGFRB-207ENST00000520579 CNKSR2Q8WXI2 1034 aa12.44□□□□□ -0.42
PDGFRB-207ENST00000520579 LRRIQ1Q96JM4 1722 aa12.44□□□□□ -0.42
PDGFRB-207ENST00000520579 KCNJ4P48050 445 aa12.44□□□□□ -0.42
PDGFRB-207ENST00000520579 MVPQ14764 893 aaKnown RBP12.44□□□□□ -0.42
PDGFRB-207ENST00000520579 NUTM2DQ5VT03 806 aaPredicted RBP12.44□□□□□ -0.42
PDGFRB-207ENST00000520579 NOB1Q9ULX3 412 aaKnown RBP12.43□□□□□ -0.42
PDGFRB-207ENST00000520579 ZNF521Q96K83 1311 aa12.43□□□□□ -0.42
PDGFRB-207ENST00000520579 RALGAPBQ86X10 1494 aa12.43□□□□□ -0.42
PDGFRB-207ENST00000520579 PTMSP20962 102 aa12.43□□□□□ -0.42
PDGFRB-207ENST00000520579 SKOR2Q2VWA4 1001 aaPredicted RBP12.43□□□□□ -0.42
PDGFRB-207ENST00000520579 TMEM57Q8N5G2 664 aa12.43□□□□□ -0.42
PDGFRB-207ENST00000520579 RNF216Q9NWF9 866 aaPredicted RBP12.43□□□□□ -0.42
PDGFRB-207ENST00000520579 ZSCAN23Q3MJ62 389 aa12.42□□□□□ -0.42
PDGFRB-207ENST00000520579 KIAA0586Q9BVV6 1533 aa12.42□□□□□ -0.42
PDGFRB-207ENST00000520579 K7ELQ4 463 aaPredicted RBP12.42□□□□□ -0.42
PDGFRB-207ENST00000520579 ZNF692Q9BU19 519 aaPredicted RBP12.42□□□□□ -0.42
PDGFRB-207ENST00000520579 TNNT3P45378 269 aaPredicted RBP12.41□□□□□ -0.42
PDGFRB-207ENST00000520579 ZGPATQ8N5A5 531 aaKnown RBP12.41□□□□□ -0.42
PDGFRB-207ENST00000520579 ABCA10Q8WWZ4 1543 aa12.41□□□□□ -0.42
PDGFRB-207ENST00000520579 RAB3GAP1Q15042 981 aa12.41□□□□□ -0.42
PDGFRB-207ENST00000520579 CLGNO14967 610 aa12.41□□□□□ -0.42
PDGFRB-207ENST00000520579 MTHFSP49914 203 aa12.41□□□□□ -0.42
PDGFRB-207ENST00000520579 UTP14CQ5TAP6 766 aaKnown RBP12.41□□□□□ -0.42
PDGFRB-207ENST00000520579 TRERF1Q96PN7 1200 aa12.41□□□□□ -0.42
PDGFRB-207ENST00000520579 TRIM27P14373 513 aa12.4□□□□□ -0.42
PDGFRB-207ENST00000520579 SSH1Q8WYL5 1049 aa12.4□□□□□ -0.42
PDGFRB-207ENST00000520579 KIF20AO95235 890 aa12.4□□□□□ -0.42
PDGFRB-207ENST00000520579 ABCA5Q8WWZ7 1642 aa12.4□□□□□ -0.42
PDGFRB-207ENST00000520579 SLC12A5Q9H2X9 1139 aa12.4□□□□□ -0.42
PDGFRB-207ENST00000520579 TTC12Q9H892 705 aaPredicted RBP12.4□□□□□ -0.42
PDGFRB-207ENST00000520579 NSFL1CQ9UNZ2 370 aaKnown RBP12.4□□□□□ -0.42
PDGFRB-207ENST00000520579 NGEFQ8N5V2 710 aa12.39□□□□□ -0.43
PDGFRB-207ENST00000520579 TARBP1Q13395 1621 aaKnown RBP12.39□□□□□ -0.43
PDGFRB-207ENST00000520579 TRAK1Q9UPV9 953 aa12.39□□□□□ -0.43
PDGFRB-207ENST00000520579 MTERF4Q7Z6M4 381 aaKnown RBP12.39□□□□□ -0.43
PDGFRB-207ENST00000520579 CHMP3Q9Y3E7 222 aa12.39□□□□□ -0.43
PDGFRB-207ENST00000520579 ROCK1Q13464 1354 aa12.39□□□□□ -0.43
PDGFRB-207ENST00000520579 CHRM1P11229 460 aaPredicted RBP12.38□□□□□ -0.43
PDGFRB-207ENST00000520579 CFAP70Q5T0N1 1121 aa12.38□□□□□ -0.43
PDGFRB-207ENST00000520579 JPH4Q96JJ6 628 aa12.38□□□□□ -0.43
PDGFRB-207ENST00000520579 CCDC9Q9Y3X0 531 aaKnown RBP12.38□□□□□ -0.43
PDGFRB-207ENST00000520579 TCOF1Q13428 1488 aaKnown RBP12.38□□□□□ -0.43
PDGFRB-207ENST00000520579 LETM1O95202 739 aaPredicted RBP12.38□□□□□ -0.43
PDGFRB-207ENST00000520579 NLRP1Q9C000 1473 aa12.38□□□□□ -0.43
PDGFRB-207ENST00000520579 TBC1D9Q6ZT07 1266 aa12.37□□□□□ -0.43
PDGFRB-207ENST00000520579 SPC24Q8NBT2 197 aa12.37□□□□□ -0.43
PDGFRB-207ENST00000520579 THUMPD2Q9BTF0 503 aaKnown RBP12.37□□□□□ -0.43
PDGFRB-207ENST00000520579 GCC2Q8IWJ2 1684 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms